Gene
| Gene Model ID | habu1_s1518_g05675 |
|---|---|
| Locus | habu1_scaffold1518 : 83797 ... 94185 : - |
| To GenomeBrowser | habu1_scaffold1518:83797..94185 |
| Genes list of scaffold | habu1_scaffold1518 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxiredoxin-1 isoform x2 | EC:1.11.1.15 GO:0051920 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1518_g05675.t2 | 1 | 1 | AhpC-TSA | 8 | 141 | 2.20004e-41 | 140.4 | 7.00649e-45 | 3.50002e-41 | 139.7 |
| habu1_s1518_g05675.t2 | 1 | 1 | Redoxin | 9 | 150 | 1.2e-15 | 57.3 | 3.4e-19 | 1.7e-15 | 56.8 |
| habu1_s1518_g05675.t2 | 1 | 1 | 1-cysPrx_C | 162 | 196 | 5.0e-15 | 54.8 | 1.7e-18 | 8.6e-15 | 54.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 100.8 |
| Venom grand-1 | 34.6 |
| Pit, infrared sensing | 69.7 |
| Nose | 243.1 |
| Brain-1 | 21.6 |
| Eye | 27.1 |
| fetal fibroblast | 226.3 |
| venom gland-2 | 36.6 |
| Brain-2 | 25.8 |
| Spleen | 27.7 |
| Lung | 22.7 |
| Liver | 3.1 |
| Kidney | 9.9 |
| Pancreas | 9.3 |
| Small intestine | 32.2 |
| Large intestine | 38.7 |
| Stomach | 19.2 |
| heart | 14.9 |
| ovary | 402.8 |
| cheek muscle | 27.8 |
Transcript
| Transcript ID | habu1_s1518_g05675.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05675.t1 gtataaaatcatgtaaatcgcggttcttcctttctagcttgtactggtcgagttttgttgagagtctcgtcttgattcgc tttaggtaaccgcagctgggtgagagccggggtggcgggaggttcgtttgtagccggggctggatttgtggaacagcttc tcccaagcaagggggggggaacgtagttttcggtgatattttattgcatattggaggagcaggcttcaatcagaatgtct tcaggaaatgctttcattgggaaaccagcgccagatttcaaggccacagcagtaatgccagatgggcaattcaaagatat tacactttctgactatagagggaaatacattgtactcttcttctatccacttgatttcacctttgtctgcccaactgaaa ttatttcattcagtgaccgttctgatgaatttaagaaaataaattgtgaggtgattggtgcttccgttgattctcatttt tgccatctagcctggatcaacactccaaaaaaacagggtggactaggcagtatgcgcattcctctggtttctgacacaaa acgtctaattgctaaggattatggtatactaaaggaagatgaaggcatttcttacaggggcctctttattattgatgata aggggatcttgcgccagatcacaatcaatgatctgcccgttggtcgttcagttgatgagacactccgactagttcaggcg tttcagtttacagacaaacatggagaagtgtgcccagctggctggcagcctggaagtgacactatcaagccagatgtcaa gcagagtaaagagtatttctccaaacagaaataaatgttgtatgttgtgttttgtacaaaaaaagtgtactgtaacatat ggcagagcaatctttgccatttcttatttaaagagtagccgtgttgtgaacagtcttttattttggatcgtgtggatctg aataagtggattacagattgacatattttgactaattatttagcctattcacctcagccaaagtatagaatttgctcctt gtactcatgcacatagctgacaattgttagcatagtaatgactccttccggtacatgtggaacaaatggcttttcttgta ttttgtactgttattaaacttctatgaaaaacttgaaaaa |
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| Transcript ID | habu1_s1518_g05675.t2 |
| Definition | - |
>habu1_s1518_g05675.t2 gtataaaatcatgtaaatcgcggttcttcctttctagcttgtactggtcgagttttgttgagagtctcgtcttgattcgc tttagcttcaatcagaatgtcttcaggaaatgctttcattgggaaaccagcgccagatttcaaggccacagcagtaatgc cagatgggcaattcaaagatattacactttctgactatagagggaaatacattgtactcttcttctatccacttgatttc acctttgtctgcccaactgaaattatttcattcagtgaccgttctgatgaatttaagaaaataaattgtgaggtgattgg tgcttccgttgattctcatttttgccatctagcctggatcaacactccaaaaaaacagggtggactaggcagtatgcgca ttcctctggtttctgacacaaaacgtctaattgctaaggattatggtatactaaaggaagatgaaggcatttcttacagg ggcctctttattattgatgataaggggatcttgcgccagatcacaatcaatgatctgcccgttggtcgttcagttgatga gacactccgactagttcaggcgtttcagtttacagacaaacatggagaagtgtgcccagctggctggcagcctggaagtg acactatcaagccagatgtcaagcagagtaaagagtatttctccaaacagaaataaatgttgtatgttgtgttttgtaca aaaaaagtgtactgtaacatatggcagagcaatctttgccatttcttatttaaagagtagccgtgttgtgaacagtcttt tattttggatcgtgtggatctgaataagtggattacagattgacatattttgactaattatttagcctattcacctcagc caaagtatagaatttgctccttgtactcatgcacatagctgacaattgttagcatagtaatgactccttccggtacatgt ggaacaaatggcttttcttgtattttgtactgttattaaacttctatgaaaaacttgaaaaa |
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Protein
| Protein ID | habu1_s1518_g05675.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05675.t1 MSSGNAFIGKPAPDFKATAVMPDGQFKDITLSDYRGKYIVLFFYPLDFTFVCPTEIISFSDRSDEFKKINCEVIGASVDS HFCHLAWINTPKKQGGLGSMRIPLVSDTKRLIAKDYGILKEDEGISYRGLFIIDDKGILRQITINDLPVGRSVDETLRLV QAFQFTDKHGEVCPAGWQPGSDTIKPDVKQSKEYFSKQK |
|
| Protein ID | habu1_s1518_g05675.t2 |
| Definition | - |
>habu1_s1518_g05675.t2 MSSGNAFIGKPAPDFKATAVMPDGQFKDITLSDYRGKYIVLFFYPLDFTFVCPTEIISFSDRSDEFKKINCEVIGASVDS HFCHLAWINTPKKQGGLGSMRIPLVSDTKRLIAKDYGILKEDEGISYRGLFIIDDKGILRQITINDLPVGRSVDETLRLV QAFQFTDKHGEVCPAGWQPGSDTIKPDVKQSKEYFSKQK |
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