Gene
| Gene Model ID | habu1_s1518_g05681 |
|---|---|
| Locus | habu1_scaffold1518 : 217186 ... 238693 : + |
| To GenomeBrowser | habu1_scaffold1518:217186..238693 |
| Genes list of scaffold | habu1_scaffold1518 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 53 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1518_g05681.t2 | 1 | 1 | DUF829 | 1 | 186 | 7.00649e-45 | 153.7 | 0.0 | 8.40779e-45 | 153.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.2 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 1.7 |
| Nose | 4.0 |
| Brain-1 | 1.7 |
| Eye | 2.8 |
| fetal fibroblast | 3.5 |
| venom gland-2 | 1.6 |
| Brain-2 | 1.5 |
| Spleen | 0.4 |
| Lung | 0.5 |
| Liver | 1.0 |
| Kidney | 1.6 |
| Pancreas | 0.0 |
| Small intestine | 0.6 |
| Large intestine | 0.7 |
| Stomach | 1.3 |
| heart | 0.7 |
| ovary | 18.3 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s1518_g05681.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05681.t1 agttgggctgcgtggtggactttcctctggaacgaagcgctgaaactttttcggaaaaaggagataaaatcaatcctccc gtggtgataatgctcggatgggctggctgcaaggacaggaatctagagaaatacagcgccatctatttacagaagaataa cccagagggaaaaggggatgagaaagtttggctagttcaagacaacccagttaacttttgtattcgagggggtgtgtagt gatccggtatacagctccatggagacttgtgttcttttcggaatccttgggtataaaatccatgcagactttggctacaa agctgttggagctcctttttgattacaaagtggagatgaagcctctactcttccatgtcttcagcaatggcgggttcatg ctctatcgttacattgtggaacttcttcatactcaacagcagttccagcaactgagggtagtggggactgttttcgatag tgcacctggcaggaagaacttgaagggcgcggttcgtgccctctcagttgtcttagcatcgtacaatgtatgcataaagt actttctcctactgtcatttgcagtgttggtggtgacattgcggattgtgttgtatcctgtgacccgctttatacatgaa agtcattatgaagcaatgttgaaccaaccttctaaatggcctgagctctatttctattccaaagctgattctgtcatctt agcaagggacatcgaggacatggtacaggctcggcgacagcaacaggtccttattaagactgttgactttttgcattctg atcatgttagccatctgcgagcatatcctacctcctatgctactcactgcatctccttcatcatactggagcagctttgt caggagaccgagtctgaaggtgtggatgtgacaatcctggctctggtgctgaggattgcaataacagacagagacgcagc aaagggaggagccccgcccaaaaagcttttcagcttgtcagagaacacacaaccagaaccaaacacaatattcaaagtgt gactaaggacttgtgctagcagggatgaagatgaccaggacttaatatttcctttataattgcctattgtttattaaaag cagtattatccaactgctat |
|
| Transcript ID | habu1_s1518_g05681.t2 |
| Definition | - |
>habu1_s1518_g05681.t2 agttgggctgcgtggtggactttcctctggaacgaagcgctgaaactttttcggaaaaaggagataaaatcaatcctccc gtggtgataatgctcggatgggctggctgcaaggacaggaatctagagaaatacagcgccatctatttacagaaggggtg tgtagtgatccggtatacagctccatggagacttgtgttcttttcggaatccttgggtataaaatccatgcagactttgg ctacaaagctgttggagctcctttttgattacaaagtggagatgaagcctctactcttccatgtcttcagcaatggcggg ttcatgctctatcgttacattgtggaacttcttcatactcaacagcagttccagcaactgagggtagtggggactgtttt cgatagtgcacctggcaggaagaacttgaagggcgcggttcgtgccctctcagttgtcttagcatcgtacaatgtatgca taaagtactttctcctactgtcatttgcagtgttggtggtgacattgcggattgtgttgtatcctgtgacccgctttata catgaaagtcattatgaagcaatgttgaaccaaccttctaaatggcctgagctctatttctattccaaagctgattctgt catcttagcaagggacatcgaggacatggtacaggctcggcgacagcaacaggtccttattaagactgttgactttttgc attctgatcatgttagccatctgcgagcatatcctacctcctatgctactcactgcatctccttcatcatactggagcag ctttgtcaggagaccgagtctgaaggtgtggatgtgacaatcctggctctggtgctgaggattgcaataacagacagaga cgcagcaaagggaggagccccgcccaaaaagcttttcagcttgtcagagaacacacaaccagaaccaaacacaatattca aagtgtgactaaggacttgtgctagcagggatgaagatgaccaggacttaatatttcctttataattgcctattgtttat taaaagcagtattatccaactgctat |
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Protein
| Protein ID | habu1_s1518_g05681.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05681.t1 MQTLATKLLELLFDYKVEMKPLLFHVFSNGGFMLYRYIVELLHTQQQFQQLRVVGTVFDSAPGRKNLKGAVRALSVVLAS YNVCIKYFLLLSFAVLVVTLRIVLYPVTRFIHESHYEAMLNQPSKWPELYFYSKADSVILARDIEDMVQARRQQQVLIKT VDFLHSDHVSHLRAYPTSYATHCISFIILEQLCQETESEGVDVTILALVLRIAITDRDAAKGGAPPKKLFSLSENTQPEP NTIFKV |
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| Protein ID | habu1_s1518_g05681.t2 |
| Definition | - |
>habu1_s1518_g05681.t2 MQTLATKLLELLFDYKVEMKPLLFHVFSNGGFMLYRYIVELLHTQQQFQQLRVVGTVFDSAPGRKNLKGAVRALSVVLAS YNVCIKYFLLLSFAVLVVTLRIVLYPVTRFIHESHYEAMLNQPSKWPELYFYSKADSVILARDIEDMVQARRQQQVLIKT VDFLHSDHVSHLRAYPTSYATHCISFIILEQLCQETESEGVDVTILALVLRIAITDRDAAKGGAPPKKLFSLSENTQPEP NTIFKV |
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