Gene
Gene Model ID | habu1_s1518_g05682 |
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Locus | habu1_scaffold1518 : 241515 ... 360895 : - |
To GenomeBrowser | habu1_scaffold1518:241515..360895 |
Genes list of scaffold | habu1_scaffold1518 |
Annotation by Blast2GO
Annotation | GO |
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e3 ubiquitin-protein ligase rnf220 | GO:0008152 GO:0008270 GO:0016874 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1518_g05682.t5 | 1 | 1 | zf-C3HC4_2 | 372 | 410 | 5.7e-09 | 35.8 | 3.6e-12 | 5.9e-09 | 35.7 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 2.7 |
Venom grand-1 | 1.0 |
Pit, infrared sensing | 1.8 |
Nose | 1.6 |
Brain-1 | 3.8 |
Eye | 2.4 |
fetal fibroblast | 3.0 |
venom gland-2 | 2.3 |
Brain-2 | 5.7 |
Spleen | 2.2 |
Lung | 3.3 |
Liver | 3.4 |
Kidney | 2.5 |
Pancreas | 1.9 |
Small intestine | 2.2 |
Large intestine | 2.2 |
Stomach | 2.0 |
heart | 4.5 |
ovary | 21.8 |
cheek muscle | 4.7 |
Transcript
Transcript ID | habu1_s1518_g05682.t1 |
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Definition | - |
>habu1_s1518_g05682.t1 tgaccgcccactccacacggagcacggctacttcagcggcatgggctactcaggcttccatcgaggaagtttgcaaggca gccacttgggcttcgccttctcctttcattaggcactataaaattgataaatttgcctctgctgaggcttcattcggtag gaaagttctccaacaggttttacaccaaagtgccactcaggaccagtctgctacccaccctcagggacagtaggctttgg agggaaagctcagacaccagcattgttacacaaatggggactatggttatatatagtagcagtggggggactttcttagg ttattttggaccttgaccacacaaaagtggaaaagctccaagaggaagttggggctgttcaccttccagtcaaagtggga ggattgttttgccctggctatgattgaaaagcaacaatggatatgggagagtcacagagagtcatgaaggcaggctactt atcttcctcaggcaagaagaaggcaacactctttgacagccaagctcctatctgccctatttgtcaggttttgcttcgtc caggtgagctgcaggagcatatggagcaggagctggagaagttaacacagctgaatatcagtaagaatgctttactgaag gatgtcatggccccaggcactcccaagtcaatattgttgtcagcctctatcaagcgggaaggagattctccaacagcatc accccattcctcagatgatattcatcactctgacagataccagacctttttgcgagtaagggcaaacagacagacccggc tgaatgctcggattggaaaaatgaaaaggaggaagcaagacgaaggacagagggaagggtcatgcatgatggaggatgac cctgttgacattgagaatgagaacggtaatcgctttgaagaatatgaatggtgtgggcagaagagaatacgtgctaccac cctcctggaaggagggttcagaggatcggggtttgtcatgtgcagtggcaaggagaatccagacagtgatgctgaccttg atgtggatggtgatgacacattggaatatggaaaaccacagtacactgaagcagatatcattccatgcactggggaagaa ccaggtgaagccaaagagagagaggcactccgaggtgcagtcctaaatggtggcactcctagtacccgaataacaacaga attctctaaatgggcaagtgatgaaatgccatcaacaagtaatggggaaggtagtaaacaagagcttgcgcaaaagactt gcaagaacagtgacatagagaagattacagaagactcggcagtgacaacatttgaggcgctaaaggctcgcgttcgtgaa ttagaaaggcagctctcccgtggggaccgctataaatgtctcatttgcatggactcatatacaatgcccctgacctccat ccagtgctggcatgtgcactgtgaggaatgctggctgcggactctgggtgctaagaagttgtgccctcagtgcaatacca tcacctcaccaggggacctcaggcgcatttacttatgaaaaaaatatggctgctgagatcaagttgtttgaaccatgggg actagggaaaaggagtggcagcaacacagaaacttgaaactaaagactccaaaagtggactagaggctgagggagctgca cgatgcctctgcttccgaacctgtcactggtgctgcccactccacaagaaggccaaaccagaatccttattgtgattcgt ttttccttttttacaaactgctgttccacgtctgtcccgtttctccaagagttggggttccatcgtggacaacttgcaag acctttcagggaagcatgagaaggtgctggatcttccatggcaggaaatgtccgagcctgtaatctgcagtctccttccc gccctctttttatttgtggtgttgtagtggatttttttaatgaaagaaaaaacttataccttcacatccacaaaggcaga atgaagcacatgtaatatagactatatgtttacaatgttgtgtataaatgggatagactccgacgttacatactaatgtt tccctttttattttttcctggggggggggggactttttttaaaaaaagagaaaaaataagcagagaacattaaacccata tttttcttggttctgcagagtttttgcattaaagtcattagtttaaaaaagtatataaatatatattatacatatatata atataaatggtttaatgttctgtggtgtatatttcctcattcagatatgaaattaacgattcgtagtttcggccataact tacatgacttctggggaaaatagaaaaaaaaaacaggttttctttcatttgttacaattaaatgggctatttatataaaa tact |
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Transcript ID | habu1_s1518_g05682.t2 |
Definition | - |
>habu1_s1518_g05682.t2 tgaccgcccactccacacggagcacggctacttcagcggcatgggctactcaggcttccatcgaggaagtttgcaaggca gccacttgggcttcgccttctcctttcattaggcactataaaattgataaatttgcctctgctgaggcttcattcggtag gaaagttctccaacaggttttacaccaaagtgccactcaggaccagtctgctacccaccctcagggacagtaggctttgc tatggggaagggaaggaacaatcctagatcctctcatcaatatgaaaggaaaaggcaagaagaaggcaacactctttgac agccaagctcctatctgccctatttgtcaggttttgcttcgtccaggtgagctgcaggagcatatggagcaggagctgga gaagttaacacagctgaatatcagtaagaatgctttactgaaggatgtcatggccccaggcactcccaagtcaatattgt tgtcagcctctatcaagcgggaaggagattctccaacagcatcaccccattcctcagatgatattcatcactctgacaga taccagacctttttgcgagtaagggcaaacagacagacccggctgaatgctcggattggaaaaatgaaaaggaggaagca agacgaaggacaggtatgtcccctctgcagccagcctctctcaggatccgaggaggagaggagtgggcatgtcgaacaat gccttgcaaagagggaagggtcatgcatgatggaggatgaccctgttgacattgagaatgagaacggtaatcgctttgaa gaatatgaatggtgtgggcagaagagaatacgtgctaccaccctcctggaaggagggttcagaggatcggggtttgtcat gtgcagtggcaaggagaatccagacagtgatgctgaccttgatgtggatggtgatgacacattggaatatggaaaaccac agtacactgaagcagatatcattccatgcactggggaagaaccaggtgaagccaaagagagagaggcactccgaggtgca gtcctaaatggtggcactcctagtacccgaataacaacagaattctctaaatgggcaagtgatgaaatgccatcaacaag taatggggaaggtagtaaacaagagcttgcgcaaaagacttgcaagaacagtgacatagagaagattacagaagactcgg cagtgacaacatttgaggcgctaaaggctcgcgttcgtgaattagaaaggcagctctcccgtggggaccgctataaatgt ctcatttgcatggactcatatacaatgcccctgacctccatccagtgctggcatgtgcactgtgaggaatgctggctgcg gactctgggtgctaagaagttgtgccctcagtgcaataccatcacctcaccaggggacctcaggcgcatttacttatgaa aaaaatatggctgctgagatcaagttgtttgaaccatggggactagggaaaaggagtggcagcaacacagaaacttgaaa ctaaagactccaaaagtggactagaggctgagggagctgcacgatgcctctgcttccgaacctgtcactggtgctgccca ctccacaagaaggccaaaccagaatccttattgtgattcgtttttccttttttacaaactgctgttccacgtctgtcccg tttctccaagagttggggttccatcgtggacaacttgcaagacctttcagggaagcatgagaaggtgctggatcttccat ggcaggaaatgtccgagcctgtaatctgcagtctccttcccgccctctttttatttgtggtgttgtagtggattttttta atgaaagaaaaaacttataccttcacatccacaaaggcagaatgaagcacatgtaatatagactatatgtttacaatgtt gtgtataaatgggatagactccgacgttacatactaatgtttccctttttattttttcctggggggggggggactttttt taaaaaaagagaaaaaataagcagagaacattaaacccatatttttcttggttctgcagagtttttgcattaaagtcatt agtttaaaaaagtatataaatatatattatacatatatataatataaatggtttaatgttctgtggtgtatatttcctca ttcagatatgaaattaacgattcgtagtttcggccataacttacatgacttctggggaaaatagaaaaaaaaaacaggtt ttctttcatttgttacaattaaatgggctatttatataaaatact |
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Transcript ID | habu1_s1518_g05682.t3 |
Definition | - |
>habu1_s1518_g05682.t3 tgaccgcccactccacacggagcacggctacttcagcggcatgggctactcaggcttccatcgaggaagtttgcaaggca gccacttgggcttcgccttctcctttcattaggcactataaaattgataaatttgcctctgctgaggcttcattcggtag gaaagttctccaacaggttttacaccaaagtgccactcaggaccagtctgctacccaccctcagggacagtaggctttgc tatggggaagggaaggaacaatcctagatcctctcatcaatatgaaaggaaaaggcaagaagaaggcaacactctttgac agccaagctcctatctgccctatttgtcaggttttgcttcgtccaggtgagctgcaggagcatatggagcaggagctgga gaagttaacacagctgaatatcagtaagaatgctttactgaaggatgtcatggccccaggcactcccaagtcaatattgt tgtcagcctctatcaagcgggaaggagattctccaacagcatcaccccattcctcagatgatattcatcactctgacaga taccagacctttttgcgagtaagggcaaacagacagacccggctgaatgctcggattggaaaaatgaaaaggaggaagca agacgaaggacagagggaagggtcatgcatgatggaggatgaccctgttgacattgagaatgagaacggtaatcgctttg aagaatatgaatggtgtgggcagaagagaatacgtgctaccaccctcctggaaggagggttcagaggatcggggtttgtc atgtgcagtggcaaggagaatccagacagtgatgctgaccttgatgtggatggtgatgacacattggaatatggaaaacc acagtacactgaagcagatatcattccatgcactggggaagaaccaggtgaagccaaagagagagaggcactccgaggtg cagtcctaaatggtggcactcctagtacccgaataacaacagaattctctaaatgggcaagtgatgaaatgccatcaaca agtaatggggaaggtagtaaacaagagcttgcgcaaaagacttgcaagaacagtgacatagagaagattacagaagactc ggcagtgacaacatttgaggcgctaaaggctcgcgttcgtgaattagaaaggcagctctcccgtggggaccgctataaat gtctcatttgcatggactcatatacaatgcccctgacctccatccagtgctggcatgtgcactgtgaggaatgctggctg cggactctgggtgctaagaagttgtgccctcagtgcaataccatcacctcaccaggggacctcaggcgcatttacttatg aaaaaaatatggctgctgagatcaagttgtttgaaccatggggactagggaaaaggagtggcagcaacacagaaacttga aactaaagactccaaaagtggactagaggctgagggagctgcacgatgcctctgcttccgaacctgtcactggtgctgcc cactccacaagaaggccaaaccagaatccttattgtgattcgtttttccttttttacaaactgctgttccacgtctgtcc cgtttctccaagagttggggttccatcgtggacaacttgcaagacctttcagggaagcatgagaaggtgctggatcttcc atggcaggaaatgtccgagcctgtaatctgcagtctccttcccgccctctttttatttgtggtgttgtagtggatttttt taatgaaagaaaaaacttataccttcacatccacaaaggcagaatgaagcacatgtaatatagactatatgtttacaatg ttgtgtataaatgggatagactccgacgttacatactaatgtttccctttttattttttcctggggggggggggactttt tttaaaaaaagagaaaaaataagcagagaacattaaacccatatttttcttggttctgcagagtttttgcattaaagtca ttagtttaaaaaagtatataaatatatattatacatatatataatataaatggtttaatgttctgtggtgtatatttcct cattcagatatgaaattaacgattcgtagtttcggccataacttacatgacttctggggaaaatagaaaaaaaaaacagg ttttctttcatttgttacaattaaatgggctatttatataaaatact |
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Transcript ID | habu1_s1518_g05682.t4 |
Definition | - |
>habu1_s1518_g05682.t4 tgaccgcccactccacacggagcacggctacttcagcggcatgggctactcaggcttccatcgaggaagtttgcaaggca gccacttgggcttcgccttctcctttcattaggcactataaaattgataaatttgcctctgctgaggcttcattcggtag gaaagttctccaacaggttttacaccaaagtgccactcaggaccagtctgctacccaccctcagggacagtaggctttgc tatggggaagggaaggaacaatcctagatcctctcatcaatatgaaaggaaaaggcaagaagaaggcaacactctttgac agccaagctcctatctgccctatttgtcaggttttgcttcgtccaggtgagctgcaggagcatatggagcaggagctgga gaagttaacacagctgaatatcagtaagaatgctttactgaaggatgtcatggccccaggcactcccaagtcaatattgt tgtcagcctctatcaagcgggaaggagattctccaacagcatcaccccattcctcagatgatattcatcactctgacaga taccagagcgagaggagggagcccggtggtcgggaggagacctttttgcgagtaagggcaaacagacagacccggctgaa tgctcggattggaaaaatgaaaaggaggaagcaagacgaaggacagagggaagggtcatgcatgatggaggatgaccctg ttgacattgagaatgagaacggtaatcgctttgaagaatatgaatggtgtgggcagaagagaatacgtgctaccaccctc ctggaaggagggttcagaggatcggggtttgtcatgtgcagtggcaaggagaatccagacagtgatgctgaccttgatgt ggatggtgatgacacattggaatatggaaaaccacagtacactgaagcagatatcattccatgcactggggaagaaccag gtgaagccaaagagagagaggcactccgaggtgcagtcctaaatggtggcactcctagtacccgaataacaacagaattc tctaaatgggcaagtgatgaaatgccatcaacaagtaatggggaaggtagtaaacaagagcttgcgcaaaagacttgcaa gaacagtgacatagagaagattacagaagactcggcagtgacaacatttgaggcgctaaaggctcgcgttcgtgaattag aaaggcagctctcccgtggggaccgctataaatgtctcatttgcatggactcatatacaatgcccctgacctccatccag tgctggcatgtgcactgtgaggaatgctggctgcggactctgggtgctaagaagttgtgccctcagtgcaataccatcac ctcaccaggggacctcaggcgcatttacttatgaaaaaaatatggctgctgagatcaagttgtttgaaccatggggacta gggaaaaggagtggcagcaacacagaaacttgaaactaaagactccaaaagtggactagaggctgagggagctgcacgat gcctctgcttccgaacctgtcactggtgctgcccactccacaagaaggccaaaccagaatccttattgtgattcgttttt ccttttttacaaactgctgttccacgtctgtcccgtttctccaagagttggggttccatcgtggacaacttgcaagacct ttcagggaagcatgagaaggtgctggatcttccatggcaggaaatgtccgagcctgtaatctgcagtctccttcccgccc tctttttatttgtggtgttgtagtggatttttttaatgaaagaaaaaacttataccttcacatccacaaaggcagaatga agcacatgtaatatagactatatgtttacaatgttgtgtataaatgggatagactccgacgttacatactaatgtttccc tttttattttttcctggggggggggggactttttttaaaaaaagagaaaaaataagcagagaacattaaacccatatttt tcttggttctgcagagtttttgcattaaagtcattagtttaaaaaagtatataaatatatattatacatatatataatat aaatggtttaatgttctgtggtgtatatttcctcattcagatatgaaattaacgattcgtagtttcggccataacttaca tgacttctggggaaaatagaaaaaaaaaacaggttttctttcatttgttacaattaaatgggctatttatataaaatact |
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Transcript ID | habu1_s1518_g05682.t5 |
Definition | - |
>habu1_s1518_g05682.t5 tgaccgcccactccacacggagcacggctacttcagcggcatgggctactcaggcttccatcgaggaagtttgcaaggca gccacttgggcttcgccttctcctttcattaggcactataaaattgataaatttgcctctgctgaggcttcattcggtag gaaagttctccaacaggttttacaccaaagtgccactcaggaccagtctgctacccaccctcagggacagtaggctttgc tatggggaagggaaggaacaatcctagatcctctcatcaatatgaaaggaaaaggcaagaagaaggcaacactctttgac agccaagctcctatctgccctatttgtcaggttttgcttcgtccaggtgagctgcaggagcatatggagcaggagctgga gaagttaacacagctgaatatcagggttccccaacccctggtccatggaccggcaccaggccacagcatgccagcaacca ggccgtgcaaacaagcgaagccccatccacgggatgcaggcagcattcgaaaccacaccccttccggtccatggaaaaac ctctctccacagcaccagtccctggtgcccaaaaggttggggggccactgttttagaagtaagaatgctttactgaagga tgtcatggccccaggcactcccaagtcaatattgttgtcagcctctatcaagcgggaaggagattctccaacagcatcac cccattcctcagatgatattcatcactctgacagataccagacctttttgcgagtaagggcaaacagacagacccggctg aatgctcggattggaaaaatgaaaaggaggaagcaagacgaaggacagagggaagggtcatgcatgatggaggatgaccc tgttgacattgagaatgagaacggtaatcgctttgaagaatatgaatggtgtgggcagaagagaatacgtgctaccaccc tcctggaaggagggttcagaggatcggggtttgtcatgtgcagtggcaaggagaatccagacagtgatgctgaccttgat gtggatggtgatgacacattggaatatggaaaaccacagtacactgaagcagatatcattccatgcactggggaagaacc aggtgaagccaaagagagagaggcactccgaggtgcagtcctaaatggtggcactcctagtacccgaataacaacagaat tctctaaatgggcaagtgatgaaatgccatcaacaagtaatggggaaggtagtaaacaagagcttgcgcaaaagacttgc aagaacagtgacatagagaagattacagaagactcggcagtgacaacatttgaggcgctaaaggctcgcgttcgtgaatt agaaaggcagctctcccgtggggaccgctataaatgtctcatttgcatggactcatatacaatgcccctgacctccatcc agtgctggcatgtgcactgtgaggaatgctggctgcggactctgggtgctaagaagttgtgccctcagtgcaataccatc acctcaccaggggacctcaggcgcatttacttatgaaaaaaatatggctgctgagatcaagttgtttgaaccatggggac tagggaaaaggagtggcagcaacacagaaacttgaaactaaagactccaaaagtggactagaggctgagggagctgcacg atgcctctgcttccgaacctgtcactggtgctgcccactccacaagaaggccaaaccagaatccttattgtgattcgttt ttccttttttacaaactgctgttccacgtctgtcccgtttctccaagagttggggttccatcgtggacaacttgcaagac ctttcagggaagcatgagaaggtgctggatcttccatggcaggaaatgtccgagcctgtaatctgcagtctccttcccgc cctctttttatttgtggtgttgtagtggatttttttaatgaaagaaaaaacttataccttcacatccacaaaggcagaat gaagcacatgtaatatagactatatgtttacaatgttgtgtataaatgggatagactccgacgttacatactaatgtttc cctttttattttttcctggggggggggggactttttttaaaaaaagagaaaaaataagcagagaacattaaacccatatt tttcttggttctgcagagtttttgcattaaagtcattagtttaaaaaagtatataaatatatattatacatatatataat ataaatggtttaatgttctgtggtgtatatttcctcattcagatatgaaattaacgattcgtagtttcggccataactta catgacttctggggaaaatagaaaaaaaaaacaggttttctttcatttgttacaattaaatgggctatttatataaaata ct |
Protein
Protein ID | habu1_s1518_g05682.t1 |
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Definition | - |
>habu1_s1518_g05682.t1 MDMGESQRVMKAGYLSSSGKKKATLFDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNALLKDVMAPGTPKSIL LSASIKREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCMMEDDPVDIENENGNRF EEYEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRG AVLNGGTPSTRITTEFSKWASDEMPSTSNGEGSKQELAQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYK CLICMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRIYL |
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Protein ID | habu1_s1518_g05682.t2 |
Definition | - |
>habu1_s1518_g05682.t2 MKGKGKKKATLFDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNALLKDVMAPGTPKSILLSASIKREGDSPTA SPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSQPLSGSEEERSGHVEQCLAKREGSCMMEDD PVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEE PGEAKEREALRGAVLNGGTPSTRITTEFSKWASDEMPSTSNGEGSKQELAQKTCKNSDIEKITEDSAVTTFEALKARVRE LERQLSRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRIYL |
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Protein ID | habu1_s1518_g05682.t3 |
Definition | - |
>habu1_s1518_g05682.t3 MKGKGKKKATLFDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNALLKDVMAPGTPKSILLSASIKREGDSPTA SPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCMMEDDPVDIENENGNRFEEYEWCGQKRIRAT TLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRITT EFSKWASDEMPSTSNGEGSKQELAQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYTMPLTS IQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRIYL |
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Protein ID | habu1_s1518_g05682.t4 |
Definition | - |
>habu1_s1518_g05682.t4 MKGKGKKKATLFDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNALLKDVMAPGTPKSILLSASIKREGDSPTA SPHSSDDIHHSDRYQSERREPGGREETFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCMMEDDPVDIENENGNRFEEY EWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVL NGGTPSTRITTEFSKWASDEMPSTSNGEGSKQELAQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLI CMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRIYL |
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Protein ID | habu1_s1518_g05682.t5 |
Definition | - |
>habu1_s1518_g05682.t5 MKGKGKKKATLFDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNIRVPQPLVHGPAPGHSMPATRPCKQAKPHPRDAG SIRNHTPSGPWKNLSPQHQSLVPKRLGGHCFRSKNALLKDVMAPGTPKSILLSASIKREGDSPTASPHSSDDIHHSDRYQ TFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCMMEDDPVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMC SGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRITTEFSKWASDEMPSTSN GEGSKQELAQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRT LGAKKLCPQCNTITSPGDLRRIYL |