Gene
| Gene Model ID | habu1_s1561_g05851 |
|---|---|
| Locus | habu1_scaffold1561 : 126956 ... 178508 : + |
| To GenomeBrowser | habu1_scaffold1561:126956..178508 |
| Genes list of scaffold | habu1_scaffold1561 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 sumo-protein ligase pias4 | GO:0000122 GO:0003677 GO:0005654 GO:0005737 GO:0008270 GO:0016363 GO:0019789 GO:0031625 GO:0032088 GO:0033235 GO:1902174 GO:1902231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1561_g05851.t3 | 1 | 1 | PINIT | 142 | 316 | 2.5e-36 | 124.9 | 1.5e-39 | 5.7e-36 | 123.7 |
| habu1_s1561_g05851.t3 | 1 | 1 | zf-MIZ | 361 | 410 | 3.0e-21 | 74.6 | 1.8e-24 | 6.6e-21 | 73.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1561_g05851.t3 | gi|591355736|ref|XP_007072172.1| | PREDICTED: E3 SUMO-protein ligase PIAS4 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.5 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 2.4 |
| Nose | 3.9 |
| Brain-1 | 2.4 |
| Eye | 3.2 |
| fetal fibroblast | 2.3 |
| venom gland-2 | 4.3 |
| Brain-2 | 1.9 |
| Spleen | 1.8 |
| Lung | 3.5 |
| Liver | 3.3 |
| Kidney | 3.4 |
| Pancreas | 1.6 |
| Small intestine | 2.6 |
| Large intestine | 1.7 |
| Stomach | 1.5 |
| heart | 2.6 |
| ovary | 19.1 |
| cheek muscle | 2.0 |
Transcript
| Transcript ID | habu1_s1561_g05851.t1 |
|---|---|
| Definition | - |
>habu1_s1561_g05851.t1 ggggccggctgcgccctcctccccctcccttcatcacgtgaccgcggcggctcttctctttcctttgcccccctccctcc acctgtccccggcgcgttggacgctggaagccaagatggcggcggagctggtggaggcgaaaaatatggtgatgagcttc cgggtctccgacttgcagatgctgctgggatttgtgggtcggagcaagagcggactcaaacacgaactggtcactcgggc cttgcagctggtccagtttgactgtagcccggaactgttcaagaagatcaaagagatttacgagactcggtacgccaaga tctccgatccgggacaaacgcagcagcagcagcagcagcagcagcagcaaccgctcccgcccgccccgcagcaccgacct tcttccgaagccctttccatccatccttcttacgaccgcaacagcacagtaacccggactggtctttctacccctaacat agactacccctccctctacggaaagtatttaaacggactcggacggttgccggtcaaaccggtgaagcctgaggtccggt tggtgaagcttcccttctacactatcctggatgaactgttgaagcccacagaactcgtcccgcagaacaacgagaaactt caggagagtccctgcgtgtttgccctgacgccgcggcaggtcgagctgatcaggaattccagggagttgcagcccggcgt gagatcagtccaggttgtcctcagaatctgctacacagacaccagctgccctcaggaagatcaataccccccaaatatcg ccgtgaaagtcaaccacagttattgttcggttccgggctactacccttccaacaagcccggggtagagccgaagaggcct tgtcgtcccatcaaccttactcatctcatgtacctgtcttccgccaccaaccgcatcaccatcatctggggcaattacgg gaagagctactcagtgggcctcttcctggtgcgacagaccacgtcggcagagttgttgcagcgattaaaaaccatcggca tcaaacaccccgaattgtgcaaggccctcgtcaaagagaagttgcggctggatccagagagcgagatcgccaccactggc gtccgagtatctttaatatgcccgctggtaaagatgcgcctgtcggtcccgtgtcgggcggaaacgtgtgcccacctgca gtgcttcgatgcggttttctacctgcagatgaacgagaagaaacccacctggatgtgtccggtgtgtgacaaaccagcca cgtatgatcagctgatgatcgatgggctcctgtcgaagatcttaaaggaatgtgaagatgcagatgagatcgaatatttg gtggacggctcctggcgcccgatcaaagccgagaaggagaggagctacagccctcagtgtccgatactcgtcgtgggcgg atccacggggggcacgtctgacgtcaatggggcgccccctcctgcccccagcctggagaacggcaagatcccggccgacg tggtggatctgacgctggacagctcgtcctcggacgacgaggaagaggaggaggaggaagacgacaacgggggaggaccc aagaggaaagtgcctcgcctgtacaagaacggcctcgcctcggcctgctgaccgccggcggggctgccgcatcacctcca cgtggcaaagcttgaattcctcggtgcttactcagataaggggacgggttggggggtatcttatcccacccacccgctcc gcccagccctccatcttgtcctcctccgaatcatcnnnnnnnnnnnnnnnnnnn |
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| Transcript ID | habu1_s1561_g05851.t2 |
| Definition | - |
>habu1_s1561_g05851.t2 cgccgccttcgctttgcgccggcgccgagggccgccgctcgcagggattggctggcggccggggccggctgcgccctcct ccccctcccttcatcacgtgaccgcggcggctcttctctttcctttgcccccctccctccacctgtccccggcgcgttgg acgctggaagccaagatggcggcggagctggtggaggcgaaaaatatggtgatgagcttccgggtctccgacttgcagat gctgctgggatttgtgggtcggagcaagagcggactcaaacacgaactggtcactcgggccttgcagctggtccagtttg actgtagcccggaactgttcaagaagatcaaagagatttacgagactcggtacgccaagatctccgatccgggacaaacg cagcagcagcagcagcagcagcagcagcaaccgctcccgcccgccccgcagcaccgaccttcttccgaagccctttccat ccatccttcttacgaccgcaacagcacagtaacccggactggtctttctacccctaacatagactacccctccctctacg gaaagtatttaaacggactcggacggttgccggtcaaaccggtgaagcctgaggtccggttggtgaagcttcccttctac actatcctggatgaactgttgaagcccacagaactcgtcccgcagaacaacgagaaacttcaggagagtccctgcgtgtt tgccctgacgccgcggcaggtcgagctgatcaggaattccagggagttgcagcccggcgtgagatcagtccaggttgtcc tcagaatctgctacacagacaccagctgccctcaggaagatcaataccccccaaatatcgccgtgaaagtcaaccacagt tattgttcggttccgggctactacccttccaacaagcccggggtagagccgaagaggccttgtcgtcccatcaaccttac tcatctcatgtacctgtcttccgccaccaaccgcatcaccatcatctggggcaattacgggaagagctactcagtgggcc tcttcctggtgcgacagaccacgtcggcagagttgttgcagcgattaaaaaccatcggcatcaaacaccccgaattgtgc aaggccctcgtcaaagagaagttgcggctggatccagagagcgagatcgccaccactggcgtccgagtatctttaatatg cccgctggtaaagatgcgcctgtcggtcccgtgtcgggcggaaacgtgtgcccacctgcagtgcttcgatgcggttttct acctgcagatgaacgagaagaaacccacctggatgtgtccggtgtgtgacaaaccagccacgtatgatcagctgatgatc gatgggctcctgtcgaagatcttaaaggaatgtgaagatgcagatgagatcgaatatttggtggacggctcctggcgccc gatcaaagccgagaaggagaggagctacagccctcagtgtccgatactcgtcgtgggcggatccacggggggcacgtctg acgtcaatggggcgccccctcctgcccccagcctggagaacggcaagatcccggccgacgtggtggatctgacgctggac agctcgtcctcggacgacgaggaagaggaggaggaggaagacgacaacgggggaggacccaagaggaaagtgcctcgcct gtacaagaacggcctcgcctcggcctgctgaccgccggcggggctgccgcatcacctccacgtggcaaagcttgaattcc tcggtgcttactcagataaggggacgggttggggggtatcttatcccacccacccgctccgcccagccctccatcttgtc ctcctccgaatcatcnnnnnnnnnnnnnnnnnnn |
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| Transcript ID | habu1_s1561_g05851.t3 |
| Definition | - |
>habu1_s1561_g05851.t3 cgccgccttcgctttgcgccggcgccgagggccgccgctcgcagggattggctggcggccggggccggctgcgccctcct ccccctcccttcatcacgtgaccgcggcggctcttctctttcctttgcccccctccctccacctgtccccggcgcgttgg acgctggaagccaagatggcggcggagctggtggaggcgaaaaatatggtgatgagcttccgggtctccgacttgcagat gctgctgggatttgtgggtcggagcaagagcggactcaaacacgaactggtcactcgggccttgcagctggtccagtttg actgtagcccggaactgttcaagaagatcaaagagatttacgagactcggtacgccaagatctccgatccgggacaaacg cagcagcagcagcagcagcagcagcagcaaccgctcccgcccgccccgcagcaccgaccttcttccgaagccctttccat ccatccttcttacgaccgcaacagcacagtaacccggactggtctttctacccctaacatagactacccctccctctacg gaaagtatttaaacggactcggacggttgccggtcaaaccggtgaagcctgaggtccggttggtgaagcttcccttctac actatcctggatgaactgttgaagcccacagaactcgagcgtagagaaccattgacctacttcaaaatcacaaaaggttt ccttaatggtggtgacaaaagaagactcccgcagaacaacgagaaacttcaggagagtccctgcgtgtttgccctgacgc cgcggcaggtcgagctgatcaggaattccagggagttgcagcccggcgtgagatcagtccaggttgtcctcagaatctgc tacacagacaccagctgccctcaggaagatcaataccccccaaatatcgccgtgaaagtcaaccacagttattgttcggt tccgggctactacccttccaacaagcccggggtagagccgaagaggccttgtcgtcccatcaaccttactcatctcatgt acctgtcttccgccaccaaccgcatcaccatcatctggggcaattacgggaagagctactcagtgggcctcttcctggtg cgacagaccacgtcggcagagttgttgcagcgattaaaaaccatcggcatcaaacaccccgaattgtgcaaggccctcgt caaagagaagttgcggctggatccagagagcgagatcgccaccactggcgtccgagtatctttaatatgcccgctggtaa agatgcgcctgtcggtcccgtgtcgggcggaaacgtgtgcccacctgcagtgcttcgatgcggttttctacctgcagatg aacgagaagaaacccacctggatgtgtccggtgtgtgacaaaccagccacgtatgatcagctgatgatcgatgggctcct gtcgaagatcttaaaggaatgtgaagatgcagatgagatcgaatatttggtggacggctcctggcgcccgatcaaagccg agaaggagaggagctacagccctcagtgtccgatactcgtcgtgggcggatccacggggggcacgtctgacgtcaatggg gcgccccctcctgcccccagcctggagaacggcaagatcccggccgacgtggtggatctgacgctggacagctcgtcctc ggacgacgaggaagaggaggaggaggaagacgacaacgggggaggacccaagaggaaagtgcctcgcctgtacaagaacg gcctcgcctcggcctgctgaccgccggcggggctgccgcatcacctccacgtggcaaagcttgaattcctcggtgcttac tcagataaggggacgggttggggggtatcttatcccacccacccgctccgcccagccctccatcttgtcctcctccgaat catcnnnnnnnnnnnnnnnnnnn |
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Protein
| Protein ID | habu1_s1561_g05851.t1 |
|---|---|
| Definition | - |
>habu1_s1561_g05851.t1 MAAELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKEIYETRYAKISDPGQTQQQQQ QQQQQPLPPAPQHRPSSEALSIHPSYDRNSTVTRTGLSTPNIDYPSLYGKYLNGLGRLPVKPVKPEVRLVKLPFYTILDE LLKPTELVPQNNEKLQESPCVFALTPRQVELIRNSRELQPGVRSVQVVLRICYTDTSCPQEDQYPPNIAVKVNHSYCSVP GYYPSNKPGVEPKRPCRPINLTHLMYLSSATNRITIIWGNYGKSYSVGLFLVRQTTSAELLQRLKTIGIKHPELCKALVK EKLRLDPESEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKPTWMCPVCDKPATYDQLMIDGLLS KILKECEDADEIEYLVDGSWRPIKAEKERSYSPQCPILVVGGSTGGTSDVNGAPPPAPSLENGKIPADVVDLTLDSSSSD DEEEEEEEDDNGGGPKRKVPRLYKNGLASAC |
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| Protein ID | habu1_s1561_g05851.t2 |
| Definition | - |
>habu1_s1561_g05851.t2 MAAELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKEIYETRYAKISDPGQTQQQQQ QQQQQPLPPAPQHRPSSEALSIHPSYDRNSTVTRTGLSTPNIDYPSLYGKYLNGLGRLPVKPVKPEVRLVKLPFYTILDE LLKPTELVPQNNEKLQESPCVFALTPRQVELIRNSRELQPGVRSVQVVLRICYTDTSCPQEDQYPPNIAVKVNHSYCSVP GYYPSNKPGVEPKRPCRPINLTHLMYLSSATNRITIIWGNYGKSYSVGLFLVRQTTSAELLQRLKTIGIKHPELCKALVK EKLRLDPESEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKPTWMCPVCDKPATYDQLMIDGLLS KILKECEDADEIEYLVDGSWRPIKAEKERSYSPQCPILVVGGSTGGTSDVNGAPPPAPSLENGKIPADVVDLTLDSSSSD DEEEEEEEDDNGGGPKRKVPRLYKNGLASAC |
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| Protein ID | habu1_s1561_g05851.t3 |
| Definition | - |
>habu1_s1561_g05851.t3 MAAELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKEIYETRYAKISDPGQTQQQQQ QQQQQPLPPAPQHRPSSEALSIHPSYDRNSTVTRTGLSTPNIDYPSLYGKYLNGLGRLPVKPVKPEVRLVKLPFYTILDE LLKPTELERREPLTYFKITKGFLNGGDKRRLPQNNEKLQESPCVFALTPRQVELIRNSRELQPGVRSVQVVLRICYTDTS CPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEPKRPCRPINLTHLMYLSSATNRITIIWGNYGKSYSVGLFLVRQTTS AELLQRLKTIGIKHPELCKALVKEKLRLDPESEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKP TWMCPVCDKPATYDQLMIDGLLSKILKECEDADEIEYLVDGSWRPIKAEKERSYSPQCPILVVGGSTGGTSDVNGAPPPA PSLENGKIPADVVDLTLDSSSSDDEEEEEEEDDNGGGPKRKVPRLYKNGLASAC |
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