Gene
| Gene Model ID | habu1_s1561_g05852 |
|---|---|
| Locus | habu1_scaffold1561 : 188006 ... 200598 : + |
| To GenomeBrowser | habu1_scaffold1561:188006..200598 |
| Genes list of scaffold | habu1_scaffold1561 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| elongation factor partial | GO:0002244 GO:0003746 GO:0003924 GO:0005525 GO:0005634 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006448 GO:0009405 GO:0016235 GO:0017183 GO:0019901 GO:0043687 GO:0044822 GO:0045727 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1561_g05852.t1 | 1 | 1 | GTP_EFTU | 18 | 234 | 0.0 | 205.8 | 0.0 | 0.0 | 205.5 |
| habu1_s1561_g05852.t1 | 1 | 1 | MMR_HSR1 | 28 | 159 | 5.0e-06 | 26.4 | 1.3e-09 | 9.3e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1561_g05852.t1 | gi|602664767|ref|XP_007437998.1| | PREDICTED: elongation factor 2-like [Python bivittatus] | 0.0 |
| habu1_s1561_g05852.t1 | gi|729729543|ref|XP_010560578.1| | PREDICTED: elongation factor 2 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s1561_g05852.t1 | gi|527245942|ref|XP_005141305.1| | PREDICTED: elongation factor 2 [Melopsittacus undulatus] | 0.0 |
| habu1_s1561_g05852.t1 | gi|701293202|ref|XP_010022528.1| | PREDICTED: LOW QUALITY PROTEIN: elongation factor 2-like, partial [Nestor notabilis] | 0.0 |
| habu1_s1561_g05852.t1 | gi|634876656|ref|XP_007949224.1| | PREDICTED: elongation factor 2 [Orycteropus afer afer] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 510.5 |
| Venom grand-1 | 996.9 |
| Pit, infrared sensing | 705.5 |
| Nose | 520.2 |
| Brain-1 | 175.9 |
| Eye | 686.5 |
| fetal fibroblast | 829.2 |
| venom gland-2 | 1353.6 |
| Brain-2 | 158.4 |
| Spleen | 656.2 |
| Lung | 836.9 |
| Liver | 1641.9 |
| Kidney | 1535.5 |
| Pancreas | 1062.8 |
| Small intestine | 1065.8 |
| Large intestine | 731.8 |
| Stomach | 818.0 |
| heart | 749.1 |
| ovary | 186.4 |
| cheek muscle | 1234.0 |
Transcript
| Transcript ID | habu1_s1561_g05852.t1 |
|---|---|
| Definition | - |
>habu1_s1561_g05852.t1 agggcagctcgagccgccgccattgttgccggtctttttttttccttctttttcccccgcccctgcggagaatccgaagc catccgccaacatggtgaacttcacagtagaccagatccgagccatcatggacaagaaggccaacatccggaacatgtcg gtgattgcccacgtggatcatgggaaatccacgctgaccgactcgctggtatgtaaagccggcattatcgcctcgtcccg cgccggtgagacccgcttcaccgacacgaggaaagatgagcaagagagatgcatcaccatcaagtcgacggccatttccc tcttctacgagctttcggagaacgacttggccttcatcaagcagagcaaagatggctgtggcttcctgatcaacctcatc gactcccccggccacgtggatttttcttcagaagttacagctgccctacgggtcaccgacggtgccttggttgtggtgga ttgtgtgtctggggtctgcgtccagaccgagactgtcttgcgccaggctatcgctgagaggatcaagcccgtgctgatga tgaacaagatggaccgggccctgctggagctgcaactgcagcctgaggagctgtaccagaccttccagcgcattgtggag aatgtcaacgtcatcatctccacctacggggaaggcgagaccggccccatgggcaacatcatgatcgatccagtcctcgg cacagtcgggtttggctccggcctgcacggctgggccttcacgctgaagcagtttgctgagatgtacgtggccaagttcg cagccaaaggcgaagggcagctgaacagcaacgaacgtgccaaaaaggtggacgacatgatgaagaagctctggggcgac agatactttgacccggcgactggcaagtttagcaaagctgccaccagctctggaaagaaactgccaaggactttctgcca gctgatcctagaccccatcttcaaggtaggnnnnnnnnnnnnntcgtagtttccttggccagccccaaactatacccacc acgatgctcaaggtgcctgcctctcctctgcctgtgcgtgatgacgaaaaaagttcttcactttgacctgatgttcttat gcttgaagaaatgtttttg |
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Protein
| Protein ID | habu1_s1561_g05852.t1 |
|---|---|
| Definition | - |
>habu1_s1561_g05852.t1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASSRAGETRFTDTRKDEQERCITIKSTAISLFYE LSENDLAFIKQSKDGCGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKM DRALLELQLQPEELYQTFQRIVENVNVIISTYGEGETGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKG EGQLNSNERAKKVDDMMKKLWGDRYFDPATGKFSKAATSSGKKLPRTFCQLILDPIFKVXXXXXS |
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