Gene
| Gene Model ID | habu1_s15684_g21548 |
|---|---|
| Locus | habu1_scaffold15684 : 79966 ... 83039 : + |
| To GenomeBrowser | habu1_scaffold15684:79966..83039 |
| Genes list of scaffold | habu1_scaffold15684 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lyr motif-containing protein 2 | GO:0005739 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s15684_g21548.t2 | 1 | 1 | Complex1_LYR | 40 | 97 | 1.4e-17 | 63.2 | 5.1e-21 | 1.9e-17 | 62.7 |
| habu1_s15684_g21548.t2 | 1 | 1 | Complex1_LYR_1 | 40 | 99 | 1.0e-16 | 60.8 | 3.5e-20 | 1.3e-16 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s15684_g21548.t2 | gi|701313983|ref|XP_010017872.1| | PREDICTED: LYR motif-containing protein 2, partial [Nestor notabilis] | 6.0e-40 |
| habu1_s15684_g21548.t2 | gi|701347686|ref|XP_009982893.1| | PREDICTED: LYR motif-containing protein 2 [Tauraco erythrolophus] | 2.0e-39 |
| habu1_s15684_g21548.t2 | gi|527270875|ref|XP_005153350.1| | PREDICTED: LYR motif-containing protein 2 [Melopsittacus undulatus] | 1.0e-38 |
| habu1_s15684_g21548.t2 | gi|694863894|ref|XP_009473934.1| | PREDICTED: LYR motif-containing protein 2 [Nipponia nippon] | 5.0e-38 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 18.7 |
| Venom grand-1 | 20.9 |
| Pit, infrared sensing | 27.0 |
| Nose | 14.0 |
| Brain-1 | 7.6 |
| Eye | 12.6 |
| fetal fibroblast | 15.5 |
| venom gland-2 | 16.6 |
| Brain-2 | 4.1 |
| Spleen | 8.9 |
| Lung | 19.9 |
| Liver | 33.3 |
| Kidney | 22.1 |
| Pancreas | 17.3 |
| Small intestine | 11.8 |
| Large intestine | 13.1 |
| Stomach | 12.4 |
| heart | 17.5 |
| ovary | 20.4 |
| cheek muscle | 54.2 |
Transcript
| Transcript ID | habu1_s15684_g21548.t1 |
|---|---|
| Definition | - |
>habu1_s15684_g21548.t1 gctaaagagcccccgccagtccaaaagggccgaaaggcgggagcctgagccatggcggcctcccggctacccccgacggc cttaggcctgaagcagttcctgagaagacaacaggttcttcagttatacaggaaaatcctcaggaccattcgtcagatcc cgaatgaagccgatcgtcggtatatgagagactgggcgagggaagatttcaaaaggaataaagaggctacagatgaggat acagttaagatgatgatcactcaaggcaacctacagcttcaggagcttgagagaacactaaaattggcaaaatcctaggc ttaattctgcttacaagtcaaagcaatttttcattgcagctaactgcaaggacattaagtggaaggagccctgctgagaa tccaaagatgtcctgtgtacacttcccaaaagtcagacggaagacctgctgaatactctttgtcatggtataaatgctat aagcctgaaggttaaggtgcaataggaataaaacaagcaatagcagcaacatct |
|
| Transcript ID | habu1_s15684_g21548.t2 |
| Definition | - |
>habu1_s15684_g21548.t2 cttaggcctgaagcagaatctgtgggctgctgctttgtttggaatgtatgtacaggtagtcctcgacttacgaccacaac tgagcccaaaagtcctgttgctaagtgagaccgttaagtgaattttgtacctatttcacgacctttctggccacaagttg ttaagtgaatcactgcagctgttaacacagttgataagtgagtttgactttgctggttagaaggtcacaaatggtgacaa aaatgatcacagcacactgcaactgtcgtaaatgtgagtcaattgtcaagcatccgaatttggatcacacgaccacgggg atgctgccaacggttttcctgagaagacaacaggttcttcagttatacaggaaaatcctcaggaccattcgtcagatccc gaatgaagccgatcgtcggtatatgagagactgggcgagggaagatttcaaaaggaataaagaggctacagatgaggata cagttaagatgatgatcactcaaggcaacctacagcttcaggagcttgagagaacactaaaattggcaaaatcctaggct taattctgcttacaagtcaaagcaatttttcattgcagctaactgcaaggacattaagtggaaggagccctgctgagaat ccaaagatgtcctgtgtacacttcccaaaagtcagacggaagacctgctgaatactctttgtcatggtataaatgctata agcctgaaggttaaggtgcaataggaataaaacaagcaatagcagcaacatct |
|
Protein
| Protein ID | habu1_s15684_g21548.t1 |
|---|---|
| Definition | - |
>habu1_s15684_g21548.t1 MAASRLPPTALGLKQFLRRQQVLQLYRKILRTIRQIPNEADRRYMRDWAREDFKRNKEATDEDTVKMMITQGNLQLQELE RTLKLAKS |
|
| Protein ID | habu1_s15684_g21548.t2 |
| Definition | - |
>habu1_s15684_g21548.t2 MVTKMITAHCNCRKCESIVKHPNLDHTTTGMLPTVFLRRQQVLQLYRKILRTIRQIPNEADRRYMRDWAREDFKRNKEAT DEDTVKMMITQGNLQLQELERTLKLAKS |
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