Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s158_g00874
Locus habu1_scaffold158 : 5987 ... 32865 : -
To GenomeBrowser habu1_scaffold158:5987..32865
Genes list of scaffold habu1_scaffold158

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s158_g00874.t1 1 1 UNC-93 14 163 0.0 162.4 0.0 0.0 162.4
habu1_s158_g00874.t1 2 1 MFS_1 16 320 4.9e-11 41.9 2.3e-11 1.1e-07 30.8
habu1_s158_g00874.t1 2 2 MFS_1 273 427 4.9e-11 41.9 8.6e-08 0.00043 19.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s158_g00874.t1 gi|602662367|ref|XP_007436828.1| PREDICTED: UNC93-like protein MFSD11 isoform X2 [Python bivittatus] 0.0
habu1_s158_g00874.t1 gi|602662365|ref|XP_007436827.1| PREDICTED: UNC93-like protein MFSD11 isoform X1 [Python bivittatus] 0.0
habu1_s158_g00874.t1 gi|637267254|ref|XP_008102567.1| PREDICTED: UNC93-like protein MFSD11 [Anolis carolinensis] 0.0
habu1_s158_g00874.t1 gi|699652709|ref|XP_009880703.1| PREDICTED: UNC93-like protein MFSD11 [Charadrius vociferus] 0.0
habu1_s158_g00874.t1 gi|695139053|ref|XP_009511917.1| PREDICTED: UNC93-like protein MFSD11 isoform X2 [Phalacrocorax carbo] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.6
Venom grand-1 3.3
Pit, infrared sensing 6.0
Nose 6.0
Brain-1 2.8
Eye 3.5
fetal fibroblast 9.6
venom gland-2 9.6
Brain-2 3.4
Spleen 3.7
Lung 2.9
Liver 5.1
Kidney 4.7
Pancreas 3.2
Small intestine 4.0
Large intestine 4.3
Stomach 5.6
heart 3.0
ovary 29.6
cheek muscle 9.4

Transcript
Transcript IDhabu1_s158_g00874.t1
Definition-
>habu1_s158_g00874.t1
aagcgagggaagatagaagcgcgaggcgcgggggaggggtggctgagggacgggtcaaggctgctttctttgctgtgcct
tcgtgctgaaggggagccgagccggggcgggcgagcggggggaggggaagggggacgctgtctacttggggtggctaatg
gattcttttgcagtttggaactgcaccatgctaagattttcaaagcccattatcaggcttaatagccacactctatgggt
cagggaaatttatttaaattgtgtgtgtggggtaggaggacattgtgctgtgcagtattttgcacctttattccaaggat
aagtactgggcaacggttgttgtttttttgaggtataaaaagatagcaagcttgtctcttgttttctaggtgtcatataa
aacagtttacccttctagctgacttgatttgtaaactgttctttatttcctgtctggcatgaatggaaatagtctccgta
gctgttccttttatcagataattgatggccaagtcaaaatctgattctatgacatggtagataagtgaagatctgggtca
gaatgtgccttctttgcttctttccatctgctgctgttctgcatttgaaagaaacttaaaaaaaggaagaagcttgagag
acagatgttaacctacgtttagtctaacaacattctgataaaacacaagatgaattctgaattaaaaaaacagttgaaca
tcattgttttaggaatagcattcatgtttatgttcactgctttccaaacatgtggaaatatagcgcaaaccgttattaca
aatttaaaccatactgattttcatgggagtggctacacaagtatggctgttatttatggagtgttttcagcatcaaatat
aatttcaccttcggtggttgcagtcataggaccacaactttccatgttcattagtggtatcttctatagcttatatattg
ccatttttatccagcctattacttggagtttctacacagcctcagttttccttggaatagcagctgctgtactgtggact
gctcaaggaaattgcctaacaataaattcaaatgaaaacacaattggcagaaacagtggaattttctgggcattattgca
atccagcttgttttttggaaatctctacatatattttgcttggcaagggaaaacttacatatcagaaagcgatcgtagga
ctgtcttcatctctctgacagtgatcagtctagtgggcaccgttttgttttttctcattagaactccagaagaaacgaat
tcagaagaagaggaaaccactgctgaaaatagcatgtctggccaaagcaaaatatcaagggccaaggatgcaataaaaag
atcgttcaagttgtgtgctacaaaacagattttgctacttagtgtcacaacagcctatacagggctggaattaacattct
tctctggagtatatggaacttgcataggtgctataaagaaatttggcgctgaagaaaaaagtcttatcggactctctggt
attttcattggcattggagagatattagggggaggaatctttggcctcctaagtaagaacaacagatttggcaggaatcc
agtggtgatgttgggcatcgtagtccatttcatagctttctatttgattttttgtaatataccaaatgatgcacctattg
cctctatggaaggaacagataacattgcattcatggaaccaagcaaagaactggccattttttgcagtttcttactgggc
tttggagatagctgtttcaacactcaactccttagtattttgggattcttgtattctgaagacagtgcacctgcctttgc
aatatttaaattcattcagtctatctgtgcagctgtggctttcttctatagcaactatttgtttcttcagtggcaacttc
taataatggcaatcgttggattttttgggacaattacgtttttcacagtggaatgggaagcagcagccagaagtataggt
tatcgcaacatttgataagtgcagtgtggtcatcctgaggcagtagtcacctttccaaaccacaagttgattggaaagat
tatggaatacagatatatttaaaaccacagttc

Protein
Protein IDhabu1_s158_g00874.t1
Definition-
>habu1_s158_g00874.t1
MNSELKKQLNIIVLGIAFMFMFTAFQTCGNIAQTVITNLNHTDFHGSGYTSMAVIYGVFSASNIISPSVVAVIGPQLSMF
ISGIFYSLYIAIFIQPITWSFYTASVFLGIAAAVLWTAQGNCLTINSNENTIGRNSGIFWALLQSSLFFGNLYIYFAWQG
KTYISESDRRTVFISLTVISLVGTVLFFLIRTPEETNSEEEETTAENSMSGQSKISRAKDAIKRSFKLCATKQILLLSVT
TAYTGLELTFFSGVYGTCIGAIKKFGAEEKSLIGLSGIFIGIGEILGGGIFGLLSKNNRFGRNPVVMLGIVVHFIAFYLI
FCNIPNDAPIASMEGTDNIAFMEPSKELAIFCSFLLGFGDSCFNTQLLSILGFLYSEDSAPAFAIFKFIQSICAAVAFFY
SNYLFLQWQLLIMAIVGFFGTITFFTVEWEAAARSIGYRNI

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