Gene
| Gene Model ID | habu1_s158_g00891 |
|---|---|
| Locus | habu1_scaffold158 : 785695 ... 822784 : - |
| To GenomeBrowser | habu1_scaffold158:785695..822784 |
| Genes list of scaffold | habu1_scaffold158 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00891.t1 | 1 | 1 | UBA_4 | 12 | 50 | 4.4e-09 | 35.7 | 8.2e-13 | 6.1e-09 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s158_g00891.t1 | gi|637267399|ref|XP_008102596.1| | PREDICTED: UBA-like domain-containing protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s158_g00891.t1 | gi|602640972|ref|XP_007427292.1| | PREDICTED: UBA-like domain-containing protein 2 [Python bivittatus] | 0.0 |
| habu1_s158_g00891.t1 | gi|530611980|ref|XP_005297586.1| | PREDICTED: UBA-like domain-containing protein 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s158_g00891.t1 | gi|564260766|ref|XP_006269288.1| | PREDICTED: UBA-like domain-containing protein 2 isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s158_g00891.t1 | gi|591356603|ref|XP_007072599.1| | PREDICTED: UBA-like domain-containing protein 2 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 3.5 |
| Pit, infrared sensing | 3.6 |
| Nose | 5.0 |
| Brain-1 | 1.6 |
| Eye | 3.0 |
| fetal fibroblast | 1.9 |
| venom gland-2 | 2.1 |
| Brain-2 | 2.2 |
| Spleen | 4.8 |
| Lung | 9.5 |
| Liver | 5.5 |
| Kidney | 7.2 |
| Pancreas | 5.1 |
| Small intestine | 8.9 |
| Large intestine | 6.5 |
| Stomach | 6.6 |
| heart | 3.6 |
| ovary | 17.5 |
| cheek muscle | 8.8 |
Transcript
| Transcript ID | habu1_s158_g00891.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00891.t1 agcttaaagcctcagaacagagaaagcgcctggcatttcgggctagaagggaaaaaggagaaaagaagcctttgtcgatt ttttttttccttcccccccaaaaaaacacgtatcccagccgccgccgccaccaccaccttgggtgcgtttggctctcctc ctcccttccgtgttgtggtttcgcttctctcgccatgtcggtgaatatggaggaacttcggcatcaagtcatgattaacc agttcgtgctggctgcgggctgtgcggcggatcaagcgaagcagctactgcaagctgcacattggcaatttgagacggct ttgagtgcattttttcaagaaaccaacattcccaacacccatcaccatcatcaaatgatgtgtacacccagcaatactcc agccacgccacccaacttcccagatgctctagcaatgttttccaagctgcggacttcagagaatctccagagcagcaata gtcccattacgtcctatcgaatgctctgctttggcaacaagatcaggaaaaacaatcagcactgcgtgttgatattattt taggaatcccgagtcgagtatagtttggcagctacgctgactgcaaaatcaggagacagaacatacaagataggttattt ttgttattaaaattgttacttatttattaatat |
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Protein
| Protein ID | habu1_s158_g00891.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00891.t1 MSVNMEELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSAFFQETNIPNTHHHHQMMCTPSNTPATPPNFPDALA MFSKLRTSENLQSSNSPITSYRMLCFGNKIRKNNQHCVLILF |
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