Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s158_g00895
Locus habu1_scaffold158 : 948484 ... 961272 : +
To GenomeBrowser habu1_scaffold158:948484..961272
Genes list of scaffold habu1_scaffold158

Annotation by Blast2GO
Annotation GO
forkhead box protein j1 GO:0000122 GO:0000976 GO:0002635 GO:0002897 GO:0002924 GO:0003700 GO:0005634 GO:0005667 GO:0007420 GO:0030036 GO:0032088 GO:0033085 GO:0035089 GO:0035502 GO:0042130 GO:0042384 GO:0045409 GO:0045449 GO:0045944 GO:0050869 GO:0050900 GO:0060972 GO:0072016 GO:1901248

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s158_g00895.t2 1 1 Fork_head 118 211 6.0e-40 135.1 4.06377e-44 6.10001e-40 135.1

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.3
Venom grand-1 1.0
Pit, infrared sensing 4.2
Nose 17.4
Brain-1 1.0
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.3
Brain-2 1.4
Spleen 0.0
Lung 2.7
Liver 0.7
Kidney 2.4
Pancreas 0.1
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.1
cheek muscle 0.0

Transcript
Transcript IDhabu1_s158_g00895.t1
Definition-
>habu1_s158_g00895.t1
cgtccaaacggggagagacgttcacgtgtcagggtaacgtgtgacaccgggccaactcagctctccgggttttcgnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcgagaaaggg
aagatttaatggggatttaaaaagttggtgcgaagtgatagaactgagcagaaaaacgggaggggggctgtcaatgattg
cgctctccatggagacccgaggaccaatgagaagggcagaagctgtttatagaggcggagcgtctccatggcatccagag
aagccttttggagcagctacttattgacagtcattctgttgcttacaaatcacagtacctttgggataaaagggctctgg
cagctttaataatttatccgacgggagaacagtagaaatccccctctccccctcccttttttcttcgttaccccaccgaa
gagccccccccctcccccgtttagctgtaaacctttggcagcagtggggtttcttcataggagcaggtaagatgacggga
ttatttatttattaggctggctaagaagagggacgtttaggtttctacctcccatgatattgggaaagccttattctcct
tcccacatccaccgcatcaaactatgatcgcgggttccctgaatcagttaccatatagaaaaaactttcacttcaaggga
gtggaggagacattaaactaaggattgttcccttacccatcctccccattcttttccaatcccccccttcctgctctccc
acaattcctgaatgttggacctgcctattttgacttccactggcatgactgacggctggctaaatatgcagtcagaggaa
gaaaaaagtcaggacaatagcataatggattcgggcaacctggacgacagcttgaccagcctacagtggcttcaggaatt
ctccatcatcaatgcaaacatgggcaagtcatcctcttccctatgcagtacagatcctcatggttatcacaaaatacctg
gctcggctgcaccatgttccccccttgctggtgatccagcatgcatgggaatgccccatacccctggcaagccaatttcc
tcctccacatccaggactgcacatctacaaggccagccactagaaaacatagattacaagaccaaccctcatgtgaaacc
tccttactcttatgctaccctcatctgcatggcaatggaagcaagcaagaaaacaaagatcaccctctcagacatctata
aatggattactgataatttctgctatttccggcatgctgaccctacatggcagaattccattaggcacaacctgtccttg
aataagtgcttcatcaaggtaccacgagagaaagatgaaccgggaaaaggaggtttctggaagattgatcctcagtacgc
agacagactgatgaacggagctttcaaaaaacgcaggatgccccctgtgcagatacatccagccttcactggaagaatcc
aacaggaggcaagttccagttcttcagctcaccaatcagcaacttcttggaaaaacagcagcattctgaagatcaatgta
gaatcccagcagctgctcaaagaatttgaagaagtgaccagcgaccagaactggaacccagccgatggaaaaatgagcca
taaacgcaagcaaccgctgccaaaacgaatgtataaggcagcccgcttctccagctcccctatgcttactcaggaagaac
agacagagcttggctctctcaaaggtgattttgactgggaggctatctttgataccaccttaaatggtgatttctctacc
tttgaggatctggaaattactcctccaatcagcccaataaccagggatgtagatttgacagtgcatggaagacatattga
ttgcccacaggagtggtgcccagctgggcaagattatgtgctcacagaatctaaccagagtagcttggactttgatgaaa
catttattgccacttcttttcttcagcatccctgggatgaagggagaaatgattacctctcaaattctgtcaacatggat
ccactgtttgaactcaacgatccttctttgcaaacagaaatgaatgactggagcaatgctggctgtctttaatgaaagac
agttccctgattggaaggttcaagattaaccaactctaagaacaagatggtcccagagctgcaggacttgacaaaaggaa
gaatccatgaacaaatgagacagctttagtcttgggacccactgtctcgctgaaaagttaggatgggggaaaaagaagat
ctggataattgggctggatgtatctaaaagtaactcatttgatatggggaactctataccccaacagataacaaataata
ataatacagtgtctatttgtgttcttttaaagaaatagaggtttttctatttggggctagagggaaatgaaaaggggata
atttctttgtgggagaagggcggatatttgaagaggttggaagagcaggccttttctggtgattagggtatattagatca
tctaccgtttcctcttccttctttctttcgtttcttgggtaagtggttttcccagggacgatttctagttaaaacatggg
acaatctaacaggaaagtacaatttccatctctgttcaaggagttgcaaccacctgtctaccacactaggtcaatttaga
ttttaaaacttatatgctctaaaataaatcagtaagtcaaattgtttcaa
Transcript IDhabu1_s158_g00895.t2
Definition-
>habu1_s158_g00895.t2
cgtccaaacggggagagacgttcacgtgtcagggtaacgtgtgacaccgggccaactcagctctccgggttttcgnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcgagaaaggg
aagatttaatggggatttaaaaagttggtgcgaagtgatagaactgagcagaaaaacgggaggggggctgtcaatgattg
cgctctccatggagacccgaggaccaatgagaagggcagaagctgtttatagaggcggagcgtctccatggcatccagag
aagccttttggagcagctacttattgacagtcattctgttgcttacaaatcacagtacctttgggataaaagggctctgg
cagctttaataatttatccgacgggagaacagtagaaatccccctctccccctcccttttttcttcgttaccccaccgaa
gagccccccccctcccccgtttagctgtaaacctttggcagcagtggggtttcttcataggagcaggattgttcccttac
ccatcctccccattcttttccaatcccccccttcctgctctcccacaattcctgaatgttggacctgcctattttgactt
ccactggcatgactgacggctggctaaatatgcagtcagaggaagaaaaaagtcaggacaatagcataatggattcgggc
aacctggacgacagcttgaccagcctacagtggcttcaggaattctccatcatcaatgcaaacatgggcaagtcatcctc
ttccctatgcagtacagatcctcatggttatcacaaaatacctggctcggctgcaccatgttccccccttgctggtgatc
cagcatgcatgggaatgccccatacccctggcaagccaatttcctcctccacatccaggactgcacatctacaaggccag
ccactagaaaacatagattacaagaccaaccctcatgtgaaacctccttactcttatgctaccctcatctgcatggcaat
ggaagcaagcaagaaaacaaagatcaccctctcagacatctataaatggattactgataatttctgctatttccggcatg
ctgaccctacatggcagaattccattaggcacaacctgtccttgaataagtgcttcatcaaggtaccacgagagaaagat
gaaccgggaaaaggaggtttctggaagattgatcctcagtacgcagacagactgatgaacggagctttcaaaaaacgcag
gatgccccctgtgcagatacatccagccttcactggaagaatccaacaggaggcaagttccagttcttcagctcaccaat
cagcaacttcttggaaaaacagcagcattctgaagatcaatgtagaatcccagcagctgctcaaagaatttgaagaagtg
accagcgaccagaactggaacccagccgatggaaaaatgagccataaacgcaagcaaccgctgccaaaacgaatgtataa
ggcagcccgcttctccagctcccctatgcttactcaggaagaacagacagagcttggctctctcaaaggtgattttgact
gggaggctatctttgataccaccttaaatggtgatttctctacctttgaggatctggaaattactcctccaatcagccca
ataaccagggatgtagatttgacagtgcatggaagacatattgattgcccacaggagtggtgcccagctgggcaagatta
tgtgctcacagaatctaaccagagtagcttggactttgatgaaacatttattgccacttcttttcttcagcatccctggg
atgaagggagaaatgattacctctcaaattctgtcaacatggatccactgtttgaactcaacgatccttctttgcaaaca
gaaatgaatgactggagcaatgctggctgtctttaatgaaagacagttccctgattggaaggttcaagattaaccaactc
taagaacaagatggtcccagagctgcaggacttgacaaaaggaagaatccatgaacaaatgagacagctttagtcttggg
acccactgtctcgctgaaaagttaggatgggggaaaaagaagatctggataattgggctggatgtatctaaaagtaactc
atttgatatggggaactctataccccaacagataacaaataataataatacagtgtctatttgtgttcttttaaagaaat
agaggtttttctatttggggctagagggaaatgaaaaggggataatttctttgtgggagaagggcggatatttgaagagg
ttggaagagcaggccttttctggtgattagggtatattagatcatctaccgtttcctcttccttctttctttcgtttctt
gggtaagtggttttcccagggacgatttctagttaaaacatgggacaatctaacaggaaagtacaatttccatctctgtt
caaggagttgcaaccacctgtctaccacactaggtcaatttagattttaaaacttatatgctctaaaataaatcagtaag
tcaaattgtttcaa

Protein
Protein IDhabu1_s158_g00895.t1
Definition-
>habu1_s158_g00895.t1
MTDGWLNMQSEEEKSQDNSIMDSGNLDDSLTSLQWLQEFSIINANMGKSSSSLCSTDPHGYHKIPGSAAPCSPLAGDPAC
MGMPHTPGKPISSSTSRTAHLQGQPLENIDYKTNPHVKPPYSYATLICMAMEASKKTKITLSDIYKWITDNFCYFRHADP
TWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRRMPPVQIHPAFTGRIQQEASSSSSAHQSAT
SWKNSSILKINVESQQLLKEFEEVTSDQNWNPADGKMSHKRKQPLPKRMYKAARFSSSPMLTQEEQTELGSLKGDFDWEA
IFDTTLNGDFSTFEDLEITPPISPITRDVDLTVHGRHIDCPQEWCPAGQDYVLTESNQSSLDFDETFIATSFLQHPWDEG
RNDYLSNSVNMDPLFELNDPSLQTEMNDWSNAGCL
Protein IDhabu1_s158_g00895.t2
Definition-
>habu1_s158_g00895.t2
MTDGWLNMQSEEEKSQDNSIMDSGNLDDSLTSLQWLQEFSIINANMGKSSSSLCSTDPHGYHKIPGSAAPCSPLAGDPAC
MGMPHTPGKPISSSTSRTAHLQGQPLENIDYKTNPHVKPPYSYATLICMAMEASKKTKITLSDIYKWITDNFCYFRHADP
TWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRRMPPVQIHPAFTGRIQQEASSSSSAHQSAT
SWKNSSILKINVESQQLLKEFEEVTSDQNWNPADGKMSHKRKQPLPKRMYKAARFSSSPMLTQEEQTELGSLKGDFDWEA
IFDTTLNGDFSTFEDLEITPPISPITRDVDLTVHGRHIDCPQEWCPAGQDYVLTESNQSSLDFDETFIATSFLQHPWDEG
RNDYLSNSVNMDPLFELNDPSLQTEMNDWSNAGCL

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