Gene
| Gene Model ID | habu1_s158_g00897 |
|---|---|
| Locus | habu1_scaffold158 : 1049511 ... 1095673 : - |
| To GenomeBrowser | habu1_scaffold158:1049511..1095673 |
| Genes list of scaffold | habu1_scaffold158 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| galanin receptor type partial | GO:0004930 GO:0005230 GO:0007186 GO:0016021 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00897.t1 | 1 | 1 | 7tm_1 | 1 | 122 | 1.6e-23 | 83.1 | 1.7e-26 | 8.3e-23 | 80.8 |
| habu1_s158_g00897.t1 | 1 | 1 | Neur_chan_LBD | 138 | 300 | 6.8e-22 | 77.6 | 2.2e-25 | 1.1e-21 | 77.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s158_g00897.t1 | gi|602660180|ref|XP_007435774.1| | PREDICTED: zinc-activated ligand-gated ion channel [Python bivittatus] | 0.0 |
| habu1_s158_g00897.t1 | gi|602660182|ref|XP_007435775.1| | PREDICTED: galanin receptor type 2 [Python bivittatus] | 0.0 |
| habu1_s158_g00897.t1 | gi|694651317|ref|XP_009482304.1| | PREDICTED: galanin receptor type 2-like, partial [Pelecanus crispus] | 0.0 |
| habu1_s158_g00897.t1 | gi|690444318|ref|XP_009322849.1| | PREDICTED: galanin receptor type 2 [Pygoscelis adeliae] | 0.0 |
| habu1_s158_g00897.t1 | gi|686602704|ref|XP_009277693.1| | PREDICTED: galanin receptor type 2 [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.3 |
| Large intestine | 0.2 |
| Stomach | 0.7 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s158_g00897.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00897.t1 tgcgcggtgcatatcttccttttaacaatgttttattgcttttaaattgtttttaaactttttaattgcttttaaatatt ttatctcctcttggtgatcgtgattatttcgacacaatatggacatacccaagagtcgggtttttagttttatttctagc ccttacttttcctatatatatatatatatatatattataggaaaagtaagggcttcatgctttaggtataggtgattgct tatatgaaaagagcaaggccaccatctatagcctggatgattggatctttggccccttcatgtgtaaagcagtgcatttc ttcatctatctgaccatgtatgccagcagtttcactctcacaactgtatccttagacaggtatttggctataaggtatcc tttgcattcgagagaactaagaacacctaggaatgctgtcacagcaatttgctttatctggggtctttcattcatcttct ctggaccgtatgtcagctacttccaggagtatcagattgccaacattactgtctgtcatcccatctgggaaatgtcacag cgcaagattatggatctctgcacatttgtcttcagctatgtcatcccagtgttgattctcagcttcacctatttaaggac catccgctatctctggacatctgtggatcccatgaaaatcatgtctgattctaagaaagcagcctcaattcaaataacct ggcaagattcctctgcctctttggaagaaaaactatttaaatcactatttggtacaaatgctgtatatcagacccacaga aatggaaatcccccccttctagtgaatatcacagtgatgatgtccaatgtgctaaatatggacatcttgaaatacaccat cacatctgttctgtttctgaatcagtcatggtataatgaaaggctggcttgggatgagcaggaattccccttcagcacca tcactgtgccttggaattcagtctggactccatcctatacagttcaagaagcgtttgatataacacggagagaggaatcc cctaatgtggtacttcacagtaatgggaaaacagaatttcaacttgctcttcgcattgacagcaactgcaactttgacct cttctattacccattagatagcagccagtgctttttgagctttttctcactgaacagcaaaggttattactacactggcc ttctcatattactattccttagcacaactgaaactatcttggtgcagaagctggtcactggtaatgcaaatctttgtttg aattatggatttaaagcaaaaaagaaggcatcttctacagtatcaaacatccaattagaagaggcaaaggatcctgagac aaaagactgtggaaccgatgaagaatcaccacatctcaaacctatttctagcactttggacagctttttctgcttcatct tcttaggtttggttcttctttttcatctcatattagcaggactctggtgtctatggaaatgtgcacccaagaggcctcct ggagaaatttatctagatggaatcaagtgggaccatggagaataacatgccatttatgctaaatatccagctgaaatgtt atatatgtatgtgtacccagttttcttgttttaaataaaaatagcttttactttccaatag |
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Protein
| Protein ID | habu1_s158_g00897.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00897.t1 MYASSFTLTTVSLDRYLAIRYPLHSRELRTPRNAVTAICFIWGLSFIFSGPYVSYFQEYQIANITVCHPIWEMSQRKIMD LCTFVFSYVIPVLILSFTYLRTIRYLWTSVDPMKIMSDSKKAASIQITWQDSSASLEEKLFKSLFGTNAVYQTHRNGNPP LLVNITVMMSNVLNMDILKYTITSVLFLNQSWYNERLAWDEQEFPFSTITVPWNSVWTPSYTVQEAFDITRREESPNVVL HSNGKTEFQLALRIDSNCNFDLFYYPLDSSQCFLSFFSLNSKGYYYTGLLILLFLSTTETILVQKLVTGNANLCLNYGFK AKKKASSTVSNIQLEEAKDPETKDCGTDEESPHLKPISSTLDSFFCFIFLGLVLLFHLILAGLWCLWKCAPKRPPGEIYL DGIKWDHGE |
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