Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s158_g00899
Locus habu1_scaffold158 : 1188077 ... 1206363 : -
To GenomeBrowser habu1_scaffold158:1188077..1206363
Genes list of scaffold habu1_scaffold158

Annotation by Blast2GO
Annotation GO
cyclin-dependent kinase 3 EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s158_g00899.t2 1 1 Pkinase 8 290 0.0 274.9 0.0 0.0 274.7
habu1_s158_g00899.t2 1 1 Pkinase_Tyr 10 204 4.2e-39 134.1 2.49992e-42 6.2e-39 133.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.2
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.1
Brain-1 0.0
Eye 0.1
fetal fibroblast 0.1
venom gland-2 0.0
Brain-2 0.0
Spleen 0.2
Lung 0.0
Liver 0.0
Kidney 0.3
Pancreas 0.0
Small intestine 0.2
Large intestine 0.1
Stomach 0.1
heart 0.0
ovary 0.1
cheek muscle 0.2

Transcript
Transcript IDhabu1_s158_g00899.t1
Definition-
>habu1_s158_g00899.t1
ggtggtgcaaaagcaggatgagttttgatcctttgggcagtctgtggttcagcaagaaggagggcatggaggccaatggg
aggttggatcaacagcaccaagtcagaaagcaaaaaatggacacattccaagatgtattccagaaagtagagaagattgg
ggagggcacctatggagttgtgtataaagcaagaaacaagcaaacaggccagttagttgctctgaagaagatccgacttg
attcggagacagaaggagtacctagtacggcaatcagagaaatctcattgttaaaagaattgaaacacccaaatatagtg
agactccttgatgtagtacataatcagaagaaactatacttagtctttgaatatttgaatcaagatcttaaaaagtacat
ggactcatcacgtacaggagagcttcctctaagcttagtcaagagctatctttaccagctgttacaaggtgtaagcttct
gccattctcacagagttatccacagagacctgaagccacagaatttgctcataaatgaaatgggagccatcaaactagct
gattttggcctagctagagcttttggagttcccctacgtacctacacgcatgaggtggttaccttatggtatcgggctcc
tgaaattttactgggttgtaaatattactcaacagctgtggatatctggagcattggctgtatttttgcagaaatggtga
ctagaaaagccttgtttcctggagactctgaaattgaccaactattccggattttccgcacacttggcactcctactgaa
tcactgtggccaggagtcacaaatcttcctgactataaaggaaatttccccaaatggccaaggaaagacatgaaggtgat
cattccaaacttggatcaagatggacgagacttactgctgcaactactaatgtatgatcccaacaagcgaatctcagcca
aagctgctttgaaccaccagtatttctggcaagctccacgggatgctaaacagtgtgtggtagaacagtatgggtcatga
gattaagaagttctggttaatgctttgctggaaatagctatgggattgtctcattctaaacaacatagcaaaggagcaac
tgtaactatcattaaaatgttcttggccttttgcccagtttaatattcatgcaaacattttgacaattgtaaatggtaca
gatccttctaaggactgatagttctttaacagaggtgaaaaagcttaacgcttttagtatatgaaaaggagtagtacgat
ttgctacctgaatagtagaatgagaaaaaagtttaactaaatccactttctgtaatatattattcactctttgctgtagt
tcaagtactagcattacaagatatggttattattatttagattagactagcacatcttacagtagcctaggcgatgttga
tttttctttttttaatatgaactcatgctgtatttcacaacactattgaaaactaaccatgcttaaaaaaaaagtatgtt
tgtttgtgggggaactagatatcacagagacacactgaaatatgctatgcttgagtttctttctgtacgtatccatcata
aaaacaagaactttgtatcatcta
Transcript IDhabu1_s158_g00899.t2
Definition-
>habu1_s158_g00899.t2
caagtcactcttttcagtgctgttgtaaattcgaaccatcacaaaatgaatggttgtaagtcgagaactacctgtacata
ataacttctaatctctattagaggaagttcagcagagcatttggagcaagctgaagtcatggttcatttaacagcaccaa
gtcagaaagcaaaaaatggacacattccaagatgtattccagaaagtagagaagattggggagggcacctatggagttgt
gtataaagcaagaaacaagcaaacaggccagttagttgctctgaagaagatccgacttgattcggagacagaaggagtac
ctagtacggcaatcagagaaatctcattgttaaaagaattgaaacacccaaatatagtgagactccttgatgtagtacat
aatcagaagaaactatacttagtctttgaatatttgaatcaagatcttaaaaagtacatggactcatcacgtacaggaga
gcttcctctaagcttagtcaagagctatctttaccagctgttacaaggtgtaagcttctgccattctcacagagttatcc
acagagacctgaagccacagaatttgctcataaatgaaatgggagccatcaaactagctgattttggcctagctagagct
tttggagttcccctacgtacctacacgcatgaggtggttaccttatggtatcgggctcctgaaattttactgggttgtaa
atattactcaacagctgtggatatctggagcattggctgtatttttgcagaaatggtgactagaaaagccttgtttcctg
gagactctgaaattgaccaactattccggattttccgcacacttggcactcctactgaatcactgtggccaggagtcaca
aatcttcctgactataaaggaaatttccccaaatggccaaggaaagacatgaaggtgatcattccaaacttggatcaaga
tggacgagacttactgctgcaactactaatgtatgatcccaacaagcgaatctcagccaaagctgctttgaaccaccagt
atttctggcaagctccacgggatgctaaacagtgtgtggtagaacagtatgggtcatgagattaagaagttctggttaat
gctttgctggaaatagctatgggattgtctcattctaaacaacatagcaaaggagcaactgtaactatcattaaaatgtt
cttggccttttgcccagtttaatattcatgcaaacattttgacaattgtaaatggtacagatccttctaaggactgatag
ttctttaacagaggtgaaaaagcttaacgcttttagtatatgaaaaggagtagtacgatttgctacctgaatagtagaat
gagaaaaaagtttaactaaatccactttctgtaatatattattcactctttgctgtagttcaagtactagcattacaaga
tatggttattattatttagattagactagcacatcttacagtagcctaggcgatgttgatttttctttttttaatatgaa
ctcatgctgtatttcacaacactattgaaaactaaccatgcttaaaaaaaaagtatgtttgtttgtgggggaactagata
tcacagagacacactgaaatatgctatgcttgagtttctttctgtacgtatccatcataaaaacaagaactttgtatcat
cta

Protein
Protein IDhabu1_s158_g00899.t1
Definition-
>habu1_s158_g00899.t1
MDTFQDVFQKVEKIGEGTYGVVYKARNKQTGQLVALKKIRLDSETEGVPSTAIREISLLKELKHPNIVRLLDVVHNQKKL
YLVFEYLNQDLKKYMDSSRTGELPLSLVKSYLYQLLQGVSFCHSHRVIHRDLKPQNLLINEMGAIKLADFGLARAFGVPL
RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRTLGTPTESLWPGVTNLPDY
KGNFPKWPRKDMKVIIPNLDQDGRDLLLQLLMYDPNKRISAKAALNHQYFWQAPRDAKQCVVEQYGS
Protein IDhabu1_s158_g00899.t2
Definition-
>habu1_s158_g00899.t2
MDTFQDVFQKVEKIGEGTYGVVYKARNKQTGQLVALKKIRLDSETEGVPSTAIREISLLKELKHPNIVRLLDVVHNQKKL
YLVFEYLNQDLKKYMDSSRTGELPLSLVKSYLYQLLQGVSFCHSHRVIHRDLKPQNLLINEMGAIKLADFGLARAFGVPL
RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRTLGTPTESLWPGVTNLPDY
KGNFPKWPRKDMKVIIPNLDQDGRDLLLQLLMYDPNKRISAKAALNHQYFWQAPRDAKQCVVEQYGS

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