Gene
| Gene Model ID | habu1_s158_g00903 |
|---|---|
| Locus | habu1_scaffold158 : 1291444 ... 1304973 : + |
| To GenomeBrowser | habu1_scaffold158:1291444..1304973 |
| Genes list of scaffold | habu1_scaffold158 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0005739 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00903.t3 | 1 | 1 | PBP | 138 | 271 | 1.7e-17 | 63.6 | 2.6e-21 | 3.9e-17 | 62.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.7 |
| Venom grand-1 | 38.0 |
| Pit, infrared sensing | 20.0 |
| Nose | 12.0 |
| Brain-1 | 10.2 |
| Eye | 18.7 |
| fetal fibroblast | 26.6 |
| venom gland-2 | 19.9 |
| Brain-2 | 10.0 |
| Spleen | 20.0 |
| Lung | 19.9 |
| Liver | 22.3 |
| Kidney | 32.3 |
| Pancreas | 36.0 |
| Small intestine | 24.6 |
| Large intestine | 21.3 |
| Stomach | 22.6 |
| heart | 37.2 |
| ovary | 34.3 |
| cheek muscle | 29.3 |
Transcript
| Transcript ID | habu1_s158_g00903.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00903.t1 agagggtttagtactactggtgggtgacgctagaacggaaggggaaattggggtattttttcggtgatctttcagcgctt ggtggaaccgacttccccacgttcattttgcattttagaagtccacgtctgaccattcctcctgttaaatttggttccat tatattccagtgcatccctgtgtctggactattgctatcacctttatggctgtcctctgcaaactgggtgtacctctggg accaatgcctaatgaagacattgatgttagtaacttggaagcactggaaaagtatcgtgttttcactcgttatttcaagg tagcagaaaaagagaataaaaaaactccttggtggcgaacatataagaaacacatcactccagaggaagataaagaggca aagatcgacattggtctgcccagtcttccactatcacgaaaatatatatataaagagagaaaggcttttaggaagcaaaa tttaactaatccggaactggaacgggcatcctggctcaaaacattgcagattcctctagatgatgtcagagctgaatggg aaaaaaccagtggcccatatcacaagcaacgattagcagaacactatggactgtaccgggacttgtttgataatgccctg tttgttcctagagtgcttctaaaagtggaatataaccaggatgaggattatgttatgccagtttattatggaaatgtggt tactcccacagaggcttttaatcctcctgaaatctcatttgaagcagatgaaggaacactttggactttgttgctcacta atctagatggacacctgtctgatggcaatttggagtacgtccattggttggtgggaaacattccgggcaatcaaatagag gcagggcaagaaatctgccattatttccctgcatttccagccagaggaacgggataccatcgctacgtcttccttctatt caaacagcaccggccaattgattttactgaagatgtgcggccaacaccatgtcacagcctcaagatgagaaccttcaaaa catttgacttctacaagaagcatcagagtgatatgacaccagcaggactggtgtttttccagtgcgagtgggataattct gtcacaaacgtcttttatgagcttcttaacatgaaggaaccagtgtttgactttgttctgccacccaaatatcatccccc ccagaagaaatatccacaccgtcaacctctgaggtacctggacaggtacagggacagtgatgaacccacctatggcattt actgaacagaagaaacatgcttctttccataggagacccgaacagaatactttgtgtgtctggtccaaaaaaacagaagt ccataaaatataattgaaagtcacccagcttatcttattcttatcacctacttggaagaaaatccagtttccatctctct tgtgtatatgtgtcacagacattgttattattattttttccagtatttgatcaagaaaacttgaagaataaaatattttt atttgaataaaatc |
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| Transcript ID | habu1_s158_g00903.t2 |
| Definition | - |
>habu1_s158_g00903.t2 agagggtttagtactactgctgtcctctgcaaactgggtgtacctctgggaccaatgcctaatgaagacattgatgttag taacttggaagcactggaaaagtatcgtgttttcactcgttatttcaaggtagcagaaaaagagaataaaaaaactcctt ggtggcgaacatataagaaacacatcactccagaggaagataaagaggcaaagatcgacattggtctgcccagtcttcca ctatcacgaaaatatatatataaagagagaaaggcttttaggaagcaaaatttaactaatccggaactggaacgggcatc ctggctcaaaacattgcagattcctctagatgatgtcagagctgaatgggaaaaaaccagtggcccatatcacaagcaac gattagcagaacactatggactgtaccgggacttgtttgataatgccctgtttgttcctagagtgcttctaaaagtggaa tataaccaggatgaggattatgttatgccagtttattatggaaatgtggttactcccacagaggcttttaatcctcctga aatctcatttgaagcagatgaaggaacactttggactttgttgctcactaatctagatggacacctgtctgatggcaatt tggagtacgtccattggttggtgggaaacattccgggcaatcaaatagaggcagggcaagaaatctgccattatttccct gcatttccagccagaggaacgggataccatcgctacgtcttccttctattcaaacagcaccggccaattgattttactga agatgtgcggccaacaccatgtcacagcctcaagatgagaaccttcaaaacatttgacttctacaagaagcatcagagtg atatgacaccagcaggactggtgtttttccagtgcgagtgggataattctgtcacaaacgtcttttatgagcttcttaac atgaaggaaccagtgtttgactttgttctgccacccaaatatcatcccccccagaagaaatatccacaccgtcaacctct gaggtacctggacaggtacagggacagtgatgaacccacctatggcatttactgaacagaagaaacatgcttctttccat aggagacccgaacagaatactttgtgtgtctggtccaaaaaaacagaagtccataaaatataattgaaagtcacccagct tatcttattcttatcacctacttggaagaaaatccagtttccatctctcttgtgtatatgtgtcacagacattgttatta ttattttttccagtatttgatcaagaaaacttgaagaataaaatatttttatttgaataaaatc |
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| Transcript ID | habu1_s158_g00903.t3 |
| Definition | - |
>habu1_s158_g00903.t3 agagggtttagtactactggtgggtgacgctagaacggaaggggaaattggggtattttttcggtgatctttcagcgctt ggtggaaccgacttccccacgttcattttgcattttagaagtccacgtctgaccattcctcctgttaaatttggttccat tatattccagtgcatccctgtgtctggactattgctatcacctttatgggtattttgttgaaagaccccaggaatgatgg tctcttcatttagaatttctaaaggatggatttaggtttttctgcaagcatatatttggaagctaacataaaacagatta ttaacattggccagtagtattggtgcctttttatgtgtgtaagcattgtattgattttgattgcagctaaaatacttcat tttgagtagttaaaattacttattctgtgaccactcattgtgtaaatttccaataaactaaatgtagatacagatataaa ggtatctaatcttctttttagaagaagagtgcagttgctaactattctgtttttaaaagtcatcttggaaatagctttta tacttttgcaaatggagagatagaaaaactgatgctgtcctctgcaaactgggtgtacctctgggaccaatgcctaatga agacattgatgttagtaacttggaagcactggaaaagtatcgtgttttcactcgttatttcaaggtagcagaaaaagaga ataaaaaaactccttggtggcgaacatataagaaacacatcactccagaggaagataaagaggcaaagatcgacattggt ctgcccagtcttccactatcacgaaaatatatatataaagagagaaaggcttttaggaagcaaaatttaactaatccgga actggaacgggcatcctggctcaaaacattgcagattcctctagatgatgtcagagctgaatgggaaaaaaccagtggcc catatcacaagcaacgattagcagaacactatggactgtaccgggacttgtttgataatgccctgtttgttcctagagtg cttctaaaagtggaatataaccaggatgaggattatgttatgccagtttattatggaaatgtggttactcccacagaggc ttttaatcctcctgaaatctcatttgaagcagatgaaggaacactttggactttgttgctcactaatctagatggacacc tgtctgatggcaatttggagtacgtccattggttggtgggaaacattccgggcaatcaaatagaggcagggcaagaaatc tgccattatttccctgcatttccagccagaggaacgggataccatcgctacgtcttccttctattcaaacagcaccggcc aattgattttactgaagatgtgcggccaacaccatgtcacagcctcaagatgagaaccttcaaaacatttgacttctaca agaagcatcagagtgatatgacaccagcaggactggtgtttttccagtgcgagtgggataattctgtcacaaacgtcttt tatgagcttcttaacatgaaggaaccagtgtttgactttgttctgccacccaaatatcatcccccccagaagaaatatcc acaccgtcaacctctgaggtacctggacaggtacagggacagtgatgaacccacctatggcatttactgaacagaagaaa catgcttctttccataggagacccgaacagaatactttgtgtgtctggtccaaaaaaacagaagtccataaaatataatt gaaagtcacccagcttatcttattcttatcacctacttggaagaaaatccagtttccatctctcttgtgtatatgtgtca cagacattgttattattattttttccagtatttgatcaagaaaacttgaagaataaaatatttttatttgaataaaatc |
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Protein
| Protein ID | habu1_s158_g00903.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00903.t1 MPNEDIDVSNLEALEKYRVFTRYFKVAEKENKKTPWWRTYKKHITPEEDKEAKIDIGLPSLPLSRKYIYKERKAFRKQNL TNPELERASWLKTLQIPLDDVRAEWEKTSGPYHKQRLAEHYGLYRDLFDNALFVPRVLLKVEYNQDEDYVMPVYYGNVVT PTEAFNPPEISFEADEGTLWTLLLTNLDGHLSDGNLEYVHWLVGNIPGNQIEAGQEICHYFPAFPARGTGYHRYVFLLFK QHRPIDFTEDVRPTPCHSLKMRTFKTFDFYKKHQSDMTPAGLVFFQCEWDNSVTNVFYELLNMKEPVFDFVLPPKYHPPQ KKYPHRQPLRYLDRYRDSDEPTYGIY |
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| Protein ID | habu1_s158_g00903.t2 |
| Definition | - |
>habu1_s158_g00903.t2 MPNEDIDVSNLEALEKYRVFTRYFKVAEKENKKTPWWRTYKKHITPEEDKEAKIDIGLPSLPLSRKYIYKERKAFRKQNL TNPELERASWLKTLQIPLDDVRAEWEKTSGPYHKQRLAEHYGLYRDLFDNALFVPRVLLKVEYNQDEDYVMPVYYGNVVT PTEAFNPPEISFEADEGTLWTLLLTNLDGHLSDGNLEYVHWLVGNIPGNQIEAGQEICHYFPAFPARGTGYHRYVFLLFK QHRPIDFTEDVRPTPCHSLKMRTFKTFDFYKKHQSDMTPAGLVFFQCEWDNSVTNVFYELLNMKEPVFDFVLPPKYHPPQ KKYPHRQPLRYLDRYRDSDEPTYGIY |
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| Protein ID | habu1_s158_g00903.t3 |
| Definition | - |
>habu1_s158_g00903.t3 MPNEDIDVSNLEALEKYRVFTRYFKVAEKENKKTPWWRTYKKHITPEEDKEAKIDIGLPSLPLSRKYIYKERKAFRKQNL TNPELERASWLKTLQIPLDDVRAEWEKTSGPYHKQRLAEHYGLYRDLFDNALFVPRVLLKVEYNQDEDYVMPVYYGNVVT PTEAFNPPEISFEADEGTLWTLLLTNLDGHLSDGNLEYVHWLVGNIPGNQIEAGQEICHYFPAFPARGTGYHRYVFLLFK QHRPIDFTEDVRPTPCHSLKMRTFKTFDFYKKHQSDMTPAGLVFFQCEWDNSVTNVFYELLNMKEPVFDFVLPPKYHPPQ KKYPHRQPLRYLDRYRDSDEPTYGIY |
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