Gene
| Gene Model ID | habu1_s158_g00904 |
|---|---|
| Locus | habu1_scaffold158 : 1327334 ... 1345786 : + |
| To GenomeBrowser | habu1_scaffold158:1327334..1345786 |
| Genes list of scaffold | habu1_scaffold158 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00904.t1 | 1 | 1 | zf-B_box | 73 | 111 | 9.8e-09 | 34.9 | 4.6e-12 | 9.8e-09 | 34.9 |
| habu1_s158_g00904.t1 | 1 | 1 | SPRY | 374 | 475 | 2.0e-06 | 27.9 | 1.6e-09 | 3.4e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s158_g00904.t1 | gi|602663320|ref|XP_007437293.1| | PREDICTED: tripartite motif-containing protein 47 [Python bivittatus] | 0.0 |
| habu1_s158_g00904.t1 | gi|637268041|ref|XP_003217298.2| | PREDICTED: tripartite motif-containing protein 47 [Anolis carolinensis] | 0.0 |
| habu1_s158_g00904.t1 | gi|641798115|ref|XP_008162234.1| | PREDICTED: tripartite motif-containing protein 47 [Chrysemys picta bellii] | 0.0 |
| habu1_s158_g00904.t1 | gi|591356730|ref|XP_007072659.1| | PREDICTED: tripartite motif-containing protein 47 [Chelonia mydas] | 0.0 |
| habu1_s158_g00904.t1 | gi|564260862|ref|XP_006269335.1| | PREDICTED: tripartite motif-containing protein 47 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.6 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 7.0 |
| Nose | 3.2 |
| Brain-1 | 1.2 |
| Eye | 3.7 |
| fetal fibroblast | 5.0 |
| venom gland-2 | 0.7 |
| Brain-2 | 1.1 |
| Spleen | 1.6 |
| Lung | 5.8 |
| Liver | 7.7 |
| Kidney | 8.0 |
| Pancreas | 6.6 |
| Small intestine | 1.1 |
| Large intestine | 2.7 |
| Stomach | 3.0 |
| heart | 9.0 |
| ovary | 9.5 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s158_g00904.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00904.t1 acagccctcgccgagcagtccgggcctggctatggcacccgaggaaacgtcggagccgcgcgctccgggcaacggcgatg cccagatcgaggaggtactttgcgacttctgcaccgatggggagagggctgaagcggctaagtcgtgcttggtgtgcttg gcgtccttctgcaccccccacttgcagcctcatctgaaaagcccggctttccaaagccaccggctggttccgccgttgcg gcacatcgaggagagcctctgtaagttgcacctcaagcccttggagagcttttgccggaccgaccacagctgcatctgcc aactctgccggacccaggagcatcggagccacgaggtggtggccgtggaggtggagcaggaacacgtggaggctcagagg ccaaaactcctgaacaatattgaaaatcagctggatgaactgggagccgcaatagcacagatgaagaggatggtggatct catcaaagctactgctcagaaggagaaggaaaaggtcagcagtctctttgctgaggccaccaaggtcctggcaacattta agaaggaagtgcttaatttcattgaggtagatgaaagagccatgctgggcagagcaggggaggaactgcggcataaagaa gagcgacgggccctgctgatggaacacaagcggaacctggagaaagtctccagcatggacaccatcactttcctgcagga attccaggcattaaaaatagcagctgaggaaaaaaaccttgcatgtacagacttccccagagagctgagttttattaaat ccagtcaggccgtgtttgctgtgaaggagctgctgggaaatatttgcaagaaccaatgggaccaactgtcagggaagggt gagaatggaccttttcttcatggcataccagaagtgacaattgaaccacaggtttcagaaaggagcatcaatcctgccag tttggaatcacgagattattttctcaaatctgcattcatcattgacttggacagtgatactgctgacaagttcatccaac tctttgggacgaagggggctaagcgtgtgctgaatcccattgcttatcctgagacttcaaccaggttcatcaactgtgag caagtactgggcgagaatctgatgaaccgtggcaactattactgggaagtggagctcatagatggttgggtgagcattgg aataatcactgaaaacttcaactcccaggagtcgtatgaccggggccgcctaggcaggaatgagaagtcatgctgtctac aatggaatggccagaattatgttgcgtggtttggcggatttgactgtgttatacagcagccattttttcatactattggg gtgtacttggagtattcagagaaggtgctaacgttctatggagtcaaagattccaagatgacttgtctccagcagttcaa agtggctcgtttcaaaaagggacattttgaccctttccagaataagatcaaccaccagtttccaacactgttcacgcaca acctaaagccagccttttttctcgaaagtgtagatgctcacatgcagctcgggcctttgaagaaagactgtgtttcagta cttaagcggcgataatttggactatgcatgaccaagaataaagaatttgacaagtaggaagttt |
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Protein
| Protein ID | habu1_s158_g00904.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00904.t1 MAPEETSEPRAPGNGDAQIEEVLCDFCTDGERAEAAKSCLVCLASFCTPHLQPHLKSPAFQSHRLVPPLRHIEESLCKLH LKPLESFCRTDHSCICQLCRTQEHRSHEVVAVEVEQEHVEAQRPKLLNNIENQLDELGAAIAQMKRMVDLIKATAQKEKE KVSSLFAEATKVLATFKKEVLNFIEVDERAMLGRAGEELRHKEERRALLMEHKRNLEKVSSMDTITFLQEFQALKIAAEE KNLACTDFPRELSFIKSSQAVFAVKELLGNICKNQWDQLSGKGENGPFLHGIPEVTIEPQVSERSINPASLESRDYFLKS AFIIDLDSDTADKFIQLFGTKGAKRVLNPIAYPETSTRFINCEQVLGENLMNRGNYYWEVELIDGWVSIGIITENFNSQE SYDRGRLGRNEKSCCLQWNGQNYVAWFGGFDCVIQQPFFHTIGVYLEYSEKVLTFYGVKDSKMTCLQQFKVARFKKGHFD PFQNKINHQFPTLFTHNLKPAFFLESVDAHMQLGPLKKDCVSVLKRR |
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