Gene
| Gene Model ID | habu1_s158_g00905 |
|---|---|
| Locus | habu1_scaffold158 : 1352144 ... 1370934 : + |
| To GenomeBrowser | habu1_scaffold158:1352144..1370934 |
| Genes list of scaffold | habu1_scaffold158 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ww domain-binding protein 2 | GO:0003677 GO:0010628 GO:0031325 GO:0044260 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00905.t1 | 1 | 1 | GRAM | 15 | 84 | 7.3e-13 | 47.8 | 2.0e-16 | 1.0e-12 | 47.4 |
| habu1_s158_g00905.t1 | 1 | 1 | WWbp | 100 | 204 | 9.2e-24 | 84.5 | 1.9e-27 | 9.2e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s158_g00905.t1 | gi|327264909|ref|XP_003217251.1| | PREDICTED: WW domain-binding protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s158_g00905.t1 | gi|470594684|ref|XP_004310443.1| | PREDICTED: WW domain-binding protein 2 [Tursiops truncatus] | 0.0 |
| habu1_s158_g00905.t1 | gi|466036956|ref|XP_004275534.1| | PREDICTED: WW domain-binding protein 2 [Orcinus orca] | 0.0 |
| habu1_s158_g00905.t1 | gi|594675896|ref|XP_007185768.1| | PREDICTED: WW domain-binding protein 2 isoform X1 [Balaenoptera acutorostrata scammoni] | 0.0 |
| habu1_s158_g00905.t1 | gi|617659340|ref|XP_007536789.1| | PREDICTED: WW domain-binding protein 2 [Erinaceus europaeus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.6 |
| Venom grand-1 | 12.7 |
| Pit, infrared sensing | 7.4 |
| Nose | 10.9 |
| Brain-1 | 23.0 |
| Eye | 25.3 |
| fetal fibroblast | 4.5 |
| venom gland-2 | 22.9 |
| Brain-2 | 28.1 |
| Spleen | 5.0 |
| Lung | 7.9 |
| Liver | 7.5 |
| Kidney | 9.2 |
| Pancreas | 4.0 |
| Small intestine | 4.0 |
| Large intestine | 6.3 |
| Stomach | 5.8 |
| heart | 13.5 |
| ovary | 23.5 |
| cheek muscle | 29.5 |
Transcript
| Transcript ID | habu1_s158_g00905.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00905.t1 ggctaggctagagcacctcagtccagcgggtgctaggtaaaaagtcagcagttgctcatcggccatggcgctgaacagga accattcggagggaggcggcgtcattatcaataacagcgaaagcatcttgatgaattacgagcacattgaaatgacattc catgatatggaacatatgccagaggcatttaaagggaccaagaaaggcagtgtcttcatgactccgtatcgagttatttt tgtatctaagggaaaagatgcaatgcagtctttcatgatgcccttttatttaatgaaagaatgtgaaattaagcaacccg tgtttggagcaaattacatcaaaggcgtcgtaaaagcagaggcaggaggtggttgggaaggatccgcaacgttcaaaatg acattctcagctggaggtgccattgagtttggacagcgtatgttgcaagtagcatctcaagcttcaagaggggaagttcc caatggagcctatggttactcatacatgccaaatgggggctataccttcccaccacttgctaccaatgggatgtatcctc ctcctccttcaggatacccttatccaccaccaccacctgaattgtatcctggtccaccagtggatggtgctatgggatac atgcagcttccacctcctccctatcctgggcctatggaaccacctgctgctggcccagatcttcccaccactccagcagc tgaagctaaggcggcagaagctgctgccagtgcatattacaacccagggaaccctcataatgtctacatgtccatggacc agcctcctccacctccttactttcctccagaggacaagaaaacccagtagagaaacatcatcacacgttgcatcttttat tgccatatggctaaatattgattagggatatgacagcgataagagccaccttgtctcccccnnacatgtatctgtcatgg acagaaatgatagatatatgtgccagtaggaaagtgtttctaacatttttctggattgatgccactcatctcacagttcg aggtgattctgagtggcttataataaaacatatggaagtaaaaacaatt |
|
Protein
| Protein ID | habu1_s158_g00905.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00905.t1 MALNRNHSEGGGVIINNSESILMNYEHIEMTFHDMEHMPEAFKGTKKGSVFMTPYRVIFVSKGKDAMQSFMMPFYLMKEC EIKQPVFGANYIKGVVKAEAGGGWEGSATFKMTFSAGGAIEFGQRMLQVASQASRGEVPNGAYGYSYMPNGGYTFPPLAT NGMYPPPPSGYPYPPPPPELYPGPPVDGAMGYMQLPPPPYPGPMEPPAAGPDLPTTPAAEAKAAEAAASAYYNPGNPHNV YMSMDQPPPPPYFPPEDKKTQ |
|