Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s158_g00907
Locus habu1_scaffold158 : 1445975 ... 1514703 : -
To GenomeBrowser habu1_scaffold158:1445975..1514703
Genes list of scaffold habu1_scaffold158

Annotation by Blast2GO
Annotation GO
ring finger protein unkempt homolog isoform x2 GO:0008270 GO:0044822

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s158_g00907.t2 gi|637267564|ref|XP_008102629.1| PREDICTED: RING finger protein unkempt homolog isoform X3 [Anolis carolinensis] 0.0
habu1_s158_g00907.t2 gi|641797815|ref|XP_008162116.1| PREDICTED: RING finger protein unkempt homolog isoform X2 [Chrysemys picta bellii] 0.0
habu1_s158_g00907.t2 gi|557265986|ref|XP_006018417.1| PREDICTED: RING finger protein unkempt homolog [Alligator sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.5
Venom grand-1 1.1
Pit, infrared sensing 1.2
Nose 0.7
Brain-1 3.1
Eye 1.3
fetal fibroblast 2.7
venom gland-2 2.3
Brain-2 2.7
Spleen 2.3
Lung 1.8
Liver 1.6
Kidney 2.3
Pancreas 2.4
Small intestine 2.7
Large intestine 1.5
Stomach 1.4
heart 2.2
ovary 2.4
cheek muscle 2.2

Transcript
Transcript IDhabu1_s158_g00907.t1
Definition-
>habu1_s158_g00907.t1
ccgcgcagagtgaataataaagctctcctcctcggtggtagcgggcggcggaggagggagcggagggcaggagcatgtcg
aagggcccggtagggaccgggcctcctgcgaccgggccggtggcgcccgccagcgcgctccaagcgcagcccgagaagcc
gcagcactacacttgctgtagcagatacctgaaggaattccgcacagagcagtgtcccctgtttgtgcagcacaaatgta
ctcagcacaggccctatacatgcttccattggcactttgttaaccagcgtcgtcgccgatctatccgccgtcgggatggc
acctttaactacagtcctgacatttactgcaccaaatatgatgagaccacagggatctgccctgaaggagatgagtgtcc
attcctgcatagaactaccggtgatacagaacggcgatatcatctacgctactacaaaactggaatctgcatccatgaga
ctgattcaaaaggaaattgcaccaagaatggccttcattgtgcttttgctcatgggccacatgacctacgttctccagtt
tatgatatcagggagcttcaggccatggaagctttgcagaatggtcagaccacatcagaaagtggcatagaaggtcagtc
tgcagttgccgctagccatgctatgatagagaaaatactcagtgaagagccaaggtggcaagacacaacttatgttttgg
gaaactacaaaacagaacaatgtaagaagcccccacgcctctgtcgccaaggttatgcctgcccttattatcataatagc
aaagatagaagaaggagccctaggaaacacaaatacagatcctccccatgccctagcgtgaaacatggagatgagtgggg
agatcctagtaagtgtgacaatggagatgcatgccagtactgtcatacccgcacagagcaacagtttcacccagagatct
acaaatcaacaaaatgtaatgatatgcagcagtctggcagctgtcccagaggacccttctgtgcctttgcacatgtagaa
caacctccacttagtgaagatttacagccaacatctgctgtctctagcccaacgcaaactggccctgtaatgtacatgcc
ctcagcagcaggcgattctgttcctgtcagcccttctagtccacaagccccagaccttagcaatgtatggaataaaccag
gaactctaccaactagccctacttctgctacaattctctgtagaaatagcagtcttggaagcccatctaatttatgtgga
tcccctcctggtgcaattggaaaaccccatagtttggaaagcattggttttcccacagattcagtaactagtgcaagtag
ctataagaaggcacctggatttgagcgggaagacctggttggagcagagtatctaaagaatttcaaatgccagcaggcaa
aaatcaaatcccattccatggaacatagaacccaagaacaacctctgttacaacccaagcaggatatattagggattctt
ccagttggcagcccactgacatctagcatctcctctagcattacttctagtttggcagcaacaccaccaagcccagcagg
caccagcagtgtaccaggcatgaatgccaatgcccttcctttctacccaactagtgacactgtggagtccgtgataggtt
taaatggaatgaacagcagcatatgggagcattttgcttcaggaagtttttcacccagtacttcacctgcatttctgtca
ggtccaggtgctgctgagctggccaggttgcggcaagaattagacgaagctaacagcacgataaaacagtgggaagattc
ttggaaacaagccaaacaggcctgtgatgcatggaaaaaagaagcagaggaagctaatgatcgtgctagtacagcaaccc
tagaatgtgagcttgcccgggagcagagagagaacttggaactgcaagtcaagaaactccaggaagaaattgagcagatc
catactggccaggacccccagttcctgcgctcattctctgatttagataatctctccttgtccacactctataatctcca
aaaacagttgcgtgccaatttagaaagagttgataaggcagtgtttcaaatgcagtcggtgaaatgcctcaagtgccagg
aagagaaccgggtgtgcaactatgaaaaggaagttgacctcatctacatccgtttgaaatactcacagcttgctgtgctg
tttgaacttctacaactgcctttagtgttaattgtggttaatggaaacaaaccatcattcaaacatagcttgagaaacta
gttcatttattcactaaggttaactgcagatttgtatttagacataataaaaaaaatgtaattagtcaaaact
Transcript IDhabu1_s158_g00907.t2
Definition-
>habu1_s158_g00907.t2
ccgcgcagagtgaataataaagctctcctcctcggtggtagcgggcggcggaggagggagcggagggcaggagcatgtcg
aagggcccggtagggaccgggcctcctgcgaccgggccggtggcgcccgccagcgcgctccaagcgcagcccgagaagcc
gcagcactacacttgctgtagcagatacctgaaggaattccgcacagagcagtgtcccctgtttgtgcagcacaaatgta
ctcagcacaggccctatacatgcttccattggcactttgttaaccagcgtcgtcgccgatctatccgccgtcgggatggc
acctttaactacagtcctgacatttactgcaccaaatatgatgagaccacagggatctgccctgaaggagatgagtgtcc
attcctgcatagaactaccggtgatacagaacggcgatatcatctacgctactacaaaactggaatctgcatccatgaga
ctgattcaaaaggaaattgcaccaagaatggccttcattgtgcttttgctcatgggccacatgacctacgttctccagtt
tatgatatcagggagcttcaggccatggaagctttgcagaatggtcagaccacatcagaaagtggcatagaaggtcagtc
tgcagttgccgctagccatgctatgatagagaaaatactcagtgaagagccaaggtggcaagacacaacttatgttttgg
gaaactacaaaacagaacaatgtaagaagcccccacgcctctgtcgccaaggttatgcctgcccttattatcataatagc
aaagatagaagaaggagccctaggaaacacaaatacagatcctccccatgccctagcgtgaaacatggagatgagtgggg
agatcctagtaagtgtgacaatggagatgcatgccagtactgtcatacccgcacagagcaacagtttcacccagagatct
acaaatcaacaaaatgtaatgatatgcagcagtctggcagctgtcccagaggacccttctgtgcctttgcacatgtagaa
caacctccacttagtgaagatttacagccaacatctgctgtctctagcccaacgcaaactggccctgtaatgtacatgcc
ctcagcagcaggcgattctgttcctgtcagcccttctagtccacaagccccagaccttagcaatgtatggaataaaccag
gaactctaccaactagccctacttctgctacaattctctgtagaaatagcagtcttggaagcccatctaatttatgtgga
tcccctcctggtgcaattggaaaaccccatagtttggaaagcattggttttcccacagattcagtaactagtgcaagtag
ctataagaaggcacctggatttgagcgggaagacctggttggagcagagtatctaaagaatttcaaatgccagcaggcaa
aaatcaaatcccattccatggaacatagaacccaagaacaacctctgttacaacccaagcaggatatattagggattctt
ccagttggcagcccactgacatctagcatctcctctagcattacttctagtttggcagcaacaccaccaagcccagcagg
caccagcagtgtaccaggcatgaatgccaatgcccttcctttctacccaactagtgacactgtggagtccgtgatagagt
ctgccttggatgacctggacctgaacgaattcggagtggctgccctggagaagacatttgacagcagctcggtgccccac
acgagtggcatcatgataggtccaggtgctgctgagctggccaggttgcggcaagaattagacgaagctaacagcacgat
aaaacagtgggaagattcttggaaacaagccaaacaggcctgtgatgcatggaaaaaagaagcagaggaagctaatgatc
gtgctagtacagcaaccctagaatgtgagcttgcccgggagcagagagagaacttggaactgcaagtcaagaaactccag
gaagaaattgagcagatccatactggccaggacccccagttcctgcgctcattctctgatttagataatctctccttgtc
cacactctataatctccaaaaacagttgcgtgccaatttagaaagagttgataaggcagtgtttcaaatgcagtcggtga
aatgcctcaagtgccaggaagagaaccgggtgtgcaactatgaaaaggaagttgacctcatctacatccgtttgaaatac
tcacagcttgctgtgctgtttgaacttctacaactgcctttagtgttaattgtggttaatggaaacaaaccatcattcaa
acatagcttgagaaactagttcatttattcactaaggttaactgcagatttgtatttagacataataaaaaaaatgtaat
tagtcaaaact

Protein
Protein IDhabu1_s158_g00907.t1
Definition-
>habu1_s158_g00907.t1
MSKGPVGTGPPATGPVAPASALQAQPEKPQHYTCCSRYLKEFRTEQCPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRR
DGTFNYSPDIYCTKYDETTGICPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRS
PVYDIRELQAMEALQNGQTTSESGIEGQSAVAASHAMIEKILSEEPRWQDTTYVLGNYKTEQCKKPPRLCRQGYACPYYH
NSKDRRRSPRKHKYRSSPCPSVKHGDEWGDPSKCDNGDACQYCHTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAH
VEQPPLSEDLQPTSAVSSPTQTGPVMYMPSAAGDSVPVSPSSPQAPDLSNVWNKPGTLPTSPTSATILCRNSSLGSPSNL
CGSPPGAIGKPHSLESIGFPTDSVTSASSYKKAPGFEREDLVGAEYLKNFKCQQAKIKSHSMEHRTQEQPLLQPKQDILG
ILPVGSPLTSSISSSITSSLAATPPSPAGTSSVPGMNANALPFYPTSDTVESVIGLNGMNSSIWEHFASGSFSPSTSPAF
LSGPGAAELARLRQELDEANSTIKQWEDSWKQAKQACDAWKKEAEEANDRASTATLECELAREQRENLELQVKKLQEEIE
QIHTGQDPQFLRSFSDLDNLSLSTLYNLQKQLRANLERVDKAVFQMQSVKCLKCQEENRVCNYEKEVDLIYIRLKYSQLA
VLFELLQLPLVLIVVNGNKPSFKHSLRN
Protein IDhabu1_s158_g00907.t2
Definition-
>habu1_s158_g00907.t2
MSKGPVGTGPPATGPVAPASALQAQPEKPQHYTCCSRYLKEFRTEQCPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRR
DGTFNYSPDIYCTKYDETTGICPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRS
PVYDIRELQAMEALQNGQTTSESGIEGQSAVAASHAMIEKILSEEPRWQDTTYVLGNYKTEQCKKPPRLCRQGYACPYYH
NSKDRRRSPRKHKYRSSPCPSVKHGDEWGDPSKCDNGDACQYCHTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAH
VEQPPLSEDLQPTSAVSSPTQTGPVMYMPSAAGDSVPVSPSSPQAPDLSNVWNKPGTLPTSPTSATILCRNSSLGSPSNL
CGSPPGAIGKPHSLESIGFPTDSVTSASSYKKAPGFEREDLVGAEYLKNFKCQQAKIKSHSMEHRTQEQPLLQPKQDILG
ILPVGSPLTSSISSSITSSLAATPPSPAGTSSVPGMNANALPFYPTSDTVESVIESALDDLDLNEFGVAALEKTFDSSSV
PHTSGIMIGPGAAELARLRQELDEANSTIKQWEDSWKQAKQACDAWKKEAEEANDRASTATLECELAREQRENLELQVKK
LQEEIEQIHTGQDPQFLRSFSDLDNLSLSTLYNLQKQLRANLERVDKAVFQMQSVKCLKCQEENRVCNYEKEVDLIYIRL
KYSQLAVLFELLQLPLVLIVVNGNKPSFKHSLRN

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