Gene
| Gene Model ID | habu1_s158_g00908 |
|---|---|
| Locus | habu1_scaffold158 : 1519014 ... 1520839 : + |
| To GenomeBrowser | habu1_scaffold158:1519014..1520839 |
| Genes list of scaffold | habu1_scaffold158 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone | GO:0000183 GO:0000788 GO:0000979 GO:0000980 GO:0001649 GO:0001740 GO:0005654 GO:0005700 GO:0006335 GO:0006336 GO:0006997 GO:0007140 GO:0007155 GO:0007420 GO:0007596 GO:0008270 GO:0008360 GO:0009725 GO:0016020 GO:0030307 GO:0031492 GO:0032776 GO:0033554 GO:0042692 GO:0046982 GO:0060968 GO:0070062 GO:0090230 GO:1902340 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s158_g00908.t1 | 1 | 1 | Histone | 58 | 132 | 4.1e-33 | 113.3 | 1.7e-36 | 6.3e-33 | 112.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s158_g00908.t1 | gi|755805326|ref|XP_003999137.2| | PREDICTED: LOW QUALITY PROTEIN: histone H3.3 [Felis catus] | 0.0 |
| habu1_s158_g00908.t1 | gi|4504279|ref|NP_002098.1| | histone H3.3 [Homo sapiens] | 0.0 |
| habu1_s158_g00908.t1 | gi|684378704|ref|XP_009166091.1| | hypothetical protein T265_13221, partial [Opisthorchis viverrini] | 0.0 |
| habu1_s158_g00908.t1 | gi|544490591|ref|XP_005580074.1| | PREDICTED: histone H3.3-like [Macaca fascicularis] | 0.0 |
| habu1_s158_g00908.t1 | gi|731286412|ref|XP_010611509.1| | PREDICTED: LOW QUALITY PROTEIN: histone H3.3 [Fukomys damarensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 154.9 |
| Venom grand-1 | 214.3 |
| Pit, infrared sensing | 162.0 |
| Nose | 190.3 |
| Brain-1 | 74.6 |
| Eye | 147.1 |
| fetal fibroblast | 168.3 |
| venom gland-2 | 196.0 |
| Brain-2 | 82.5 |
| Spleen | 149.5 |
| Lung | 245.3 |
| Liver | 113.9 |
| Kidney | 69.5 |
| Pancreas | 98.5 |
| Small intestine | 135.6 |
| Large intestine | 164.5 |
| Stomach | 141.3 |
| heart | 67.3 |
| ovary | 249.4 |
| cheek muscle | 62.5 |
Transcript
| Transcript ID | habu1_s158_g00908.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00908.t1 ttgcgtgtatgtattgtgatgtcatgacgttgaaggttccctccctctataaaggcagcatcccagcagagggaggagac agttaaggtttcttcggagggtgtgcagtacgtgctatttgtgtacttacagcggaagtgtttttttaaaaaggatttgt tcctaaaagagaagagtaaagaaaaatggcccgtaccaagcagactgcccgtaaatccactggtggcaaagctccacgta aacagctggctactaaagctgctagaaaaagcgccccctctactggtggagtcaagaaacctcatcgctacagacctggt actgtggcactgcgtgagattcgccgttaccaaaagtcaacagaacttttgattcgcaaacttccatttcagagactcgt aagggagattgcccaagatttcaagacagacttaaggttccagagcgcagccattggtgcactgcaggaggctagtgaag cttatctggtgggtctgtttgaagacacaaatctctgtgccatccatgccaagagagttaccattatgcccaaagacatc cagttggctcgtaggatacggggagagagggcttaaaaaggaagcagtttttatggtgttttgtagtaaattctgtaaaa tactttggtttcaatttgtgactttttttgtatgaaattgtttataatatgttacatttgtacttaagtcattccatctt tcactcaggatgaatgctaacagtgactgttcacataaaactcagtgatgtgagccctgttgctcaatagtgacaagttg ctaatatgcagaagggatgggtgatctttcttgcttttcatgcatgtttctgtatgttaatgacttgttgggtagctaaa attgtaaggtactagaattgatataaatgtgtacagggtccttttgcaataaaactggttataacttgattcaag |
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Protein
| Protein ID | habu1_s158_g00908.t1 |
|---|---|
| Definition | - |
>habu1_s158_g00908.t1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
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