Gene
| Gene Model ID | habu1_s16115_g21615 |
|---|---|
| Locus | habu1_scaffold16115 : 3926 ... 38647 : + |
| To GenomeBrowser | habu1_scaffold16115:3926..38647 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| spermatid perinuclear rna-binding protein isoform x5 | GO:0003725 GO:0003727 GO:0005634 GO:0007286 GO:0007638 GO:0015630 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21615.t1 | 1 | 1 | DZF | 87 | 333 | 0.0 | 253.4 | 0.0 | 0.0 | 252.8 |
| habu1_s16115_g21615.t1 | 1 | 1 | dsrm | 392 | 450 | 7.5e-14 | 52.0 | 7.9e-14 | 3.9e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21615.t1 | gi|602632923|ref|XP_007423348.1| | PREDICTED: spermatid perinuclear RNA-binding protein isoform X5 [Python bivittatus] | 0.0 |
| habu1_s16115_g21615.t1 | gi|602632915|ref|XP_007423344.1| | PREDICTED: spermatid perinuclear RNA-binding protein isoform X1 [Python bivittatus] | 0.0 |
| habu1_s16115_g21615.t1 | gi|602632925|ref|XP_007423349.1| | PREDICTED: spermatid perinuclear RNA-binding protein isoform X6 [Python bivittatus] | 0.0 |
| habu1_s16115_g21615.t1 | gi|602632921|ref|XP_007423347.1| | PREDICTED: spermatid perinuclear RNA-binding protein isoform X4 [Python bivittatus] | 0.0 |
| habu1_s16115_g21615.t1 | gi|733913964|ref|XP_010719357.1| | PREDICTED: spermatid perinuclear RNA-binding protein isoform X8 [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 1.5 |
| Nose | 4.2 |
| Brain-1 | 6.7 |
| Eye | 8.3 |
| fetal fibroblast | 2.0 |
| venom gland-2 | 1.0 |
| Brain-2 | 7.0 |
| Spleen | 1.5 |
| Lung | 9.3 |
| Liver | 0.7 |
| Kidney | 7.4 |
| Pancreas | 1.5 |
| Small intestine | 3.9 |
| Large intestine | 2.9 |
| Stomach | 1.9 |
| heart | 0.9 |
| ovary | 17.1 |
| cheek muscle | 25.8 |
Transcript
| Transcript ID | habu1_s16115_g21615.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21615.t1 tccatgcaagcacgttttccataaatattagagaaatgcttcatgcattgaataaaaggccgtacatcgcccgcccttca acatgaaagctgtgattaataaaggacatataaggtgcctggtggaacctgactccaggaacgccacacctgggtgacct tctgagctgggaaaagactgagaggcttatgtggagctgctggttgaagtcccagcgcctagccaagatacccaggagaa gggaaaaggagaaaggcgaagagcaccagaggtgaaatctgctgtagccatgagatcaatccgatcgtttgctaacgatg accggcacgtgatgatgaagcattcgacgatttatccatctccagaggaacttgaagccgtccagaacatggtctccacc gtcgagtgtgcccttaagcaggtctccgattggatggacgagacgagcaagtcttctaggatggagggcagcttggagga ccaagaggaaccggctgatggccggagtagcaaggagcaaggcggccggatcttgtgtggcgtgatgaggattggtttgg tggccaaaggcttgttgataaaggacgacatggacctggaactggtcctcatgtgcaaagagaagcccacagagaccctc ttatccctcgtcaaagacaatctacctgtccaaatccagaaactcacagaagagaagtaccacatagaacaccatcccag cgaagcggccatcgtcgtccgtagcacaacggggctcccgttaaccctcaaagtgaccctcacctccccactaatccggg acgaagccgagaaggatggagtagacagtgtcccggtgaaagagccttcggatttactcaacaggcaaaaatgcctcgaa gctttggcgtctctgcgacacgccaaatggtttcaggccagagcgaacggactcaaatcctgtgtgattgtgctacggat cctgagggatttatgcaacagacttcctacttgggctcccttgaaaggctggcccttggagctgctgtgcgagaaagcca ttggcacctgcaacaggccgctgggtgccggggaagctctccggcgagtgttggagtgtttggcctcgggcattctgttg ccaggtgggcccggtgtgcatgacccctgtgagcgagagccaacggatgccttgtttagcctgactgttccacaaaggga agccataacccatagtgcccagcatgccctgagactctcggcttttggccaaatctataaggtgctggagatggaccctc tcccttccaataagctgttccagaaatattcgtggccgggggccgacaaagaaggcccagtttcctctgccctcaagagg ccttttgaagacgggttgggggacgagaaagaccccagtaagaaaatgaagaggaatctgaggaaaatccttgacagcaa agcaatagacctcatgaatgccttgatgcggctgaaccagatccggcccggcctgcagtacaagctcctctctcagtcgg ggcccgtccacgccccggtcttcaccatgtccgtggacgtggacgggacgacctacgaagcctcaggaccttccaagaag acggccaagcttcacgtggccgtaaaggtgttgcaagcgatgggctaccccaccggcttcgacgcagacatggaatgcac cagctccgatgagaagtcggataccgaagggaaaaatgagactgtgtcttcaaccacgagcaataataatgggaattcca cagttgatacctgtgcaaccttagaggtccgaactcagggtcccatcctcacagccagcggcaagaatccggtgatggag ctaaacgagaagcggcgaggcctgaaatacgagctcatctccgagacgggaggcagccatgacaagcggtttgtgatgga gaccaaaggagggctcgtaaacacagccatgtctgcggcggcacgagggagaggacgaggggctcccatgcggggggcgt ttgtcggggcagcagcggccaccagttatctggcaccaggatacgcggcaccctacggatacaacgcagcagctgccgcc gcaccggcttatgaataacttatatcgaccttttgttatagagaagaaacttagacgcttttgtttttaaaccgaacgga atccgaattatgtaaaaccttaaaaaaaaccttgtgaaggatgtatagactatacaaacgctgatcacaaaataaaacca gtttttgttgtaatagagagtattttttttttttttgcctgtttcctaataccaagccctgggtccaaatctttttatca ttttaggtttatgtgatgcagtgtttttgttttgggattttttttgtggggttttttcttttttaaaggaactgacacgc caataaattacttttcttaagaaaggaag |
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Protein
| Protein ID | habu1_s16115_g21615.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21615.t1 MRSIRSFANDDRHVMMKHSTIYPSPEELEAVQNMVSTVECALKQVSDWMDETSKSSRMEGSLEDQEEPADGRSSKEQGGR ILCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTETLLSLVKDNLPVQIQKLTEEKYHIEHHPSEAAIVVRSTTGLPLTL KVTLTSPLIRDEAEKDGVDSVPVKEPSDLLNRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRLPTWAPLKG WPLELLCEKAIGTCNRPLGAGEALRRVLECLASGILLPGGPGVHDPCEREPTDALFSLTVPQREAITHSAQHALRLSAFG QIYKVLEMDPLPSNKLFQKYSWPGADKEGPVSSALKRPFEDGLGDEKDPSKKMKRNLRKILDSKAIDLMNALMRLNQIRP GLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADMECTSSDEKSDTEGKNETVS STTSNNNGNSTVDTCATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMETKGGLVNTAMSAAARG RGRGAPMRGAFVGAAAATSYLAPGYAAPYGYNAAAAAAPAYE |
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