Gene
| Gene Model ID | habu1_s16115_g21617 |
|---|---|
| Locus | habu1_scaffold16115 : 81674 ... 109125 : - |
| To GenomeBrowser | habu1_scaffold16115:81674..109125 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable g-protein coupled receptor 21 | GO:0004930 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21617.t1 | 1 | 1 | DUF3694 | 218 | 314 | 1.0e-21 | 77.0 | 3.9e-25 | 1.9e-21 | 76.1 |
| habu1_s16115_g21617.t1 | 1 | 1 | 7tm_1 | 408 | 668 | 2.2e-40 | 138.4 | 6.30584e-44 | 3.09999e-40 | 137.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21617.t1 | gi|602632941|ref|XP_007423357.1| | PREDICTED: probable G-protein coupled receptor 21 [Python bivittatus] | 0.0 |
| habu1_s16115_g21617.t1 | gi|637365125|ref|XP_008120979.1| | PREDICTED: probable G-protein coupled receptor 21 [Anolis carolinensis] | 0.0 |
| habu1_s16115_g21617.t1 | gi|558157181|ref|XP_006122002.1| | PREDICTED: probable G-protein coupled receptor 21 [Pelodiscus sinensis] | 0.0 |
| habu1_s16115_g21617.t1 | gi|530619553|ref|XP_005299467.1| | PREDICTED: probable G-protein coupled receptor 21 [Chrysemys picta bellii] | 0.0 |
| habu1_s16115_g21617.t1 | gi|591372645|ref|XP_007061023.1| | PREDICTED: probable G-protein coupled receptor 21 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.8 |
| Venom grand-1 | 4.7 |
| Pit, infrared sensing | 6.3 |
| Nose | 8.4 |
| Brain-1 | 8.8 |
| Eye | 6.1 |
| fetal fibroblast | 8.9 |
| venom gland-2 | 6.6 |
| Brain-2 | 7.8 |
| Spleen | 2.2 |
| Lung | 8.6 |
| Liver | 1.9 |
| Kidney | 3.5 |
| Pancreas | 2.3 |
| Small intestine | 3.5 |
| Large intestine | 5.8 |
| Stomach | 4.9 |
| heart | 6.0 |
| ovary | 5.7 |
| cheek muscle | 10.3 |
Transcript
| Transcript ID | habu1_s16115_g21617.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21617.t1 cggcaatggggaaaaagttgtgatacattgcgcaatgtcacgtgacgtcgggcgagtcctcctcgcctggaatgtcccgc tcgctctgtcaaaaatcataggaaatgggagcgagcagcagctgcagaaggagcttgaggacatcctaatggaccccccc atggaggagccctccaacgaccgggaggggggggaggagagcccctcccaggacggagagggggatgagccggttctgct cgaggcctccgcctcctccaccatcaaccccgtgtccgtgacgggacccgccatgccggagatgaggctccccgtgaagg cggcccaaggagattcggaggagtccagccccttcaccccggtggctgatgaggacagcgtggtcttcagcaagctgacc tacttgggctgcgcctccgtcaacgccccccggagtgaggtggaggccctgcggatgatggccatcctgcgcagccaggg ccagacctcggtggacgtgacgctctccgtgccaaacgtgtccgagggcaccgtgagccggatcctgtacagttttgcca ccgctttccgccgttccgccaagcaagtccctcttgcagccccggttactccagagatgccggacagcgacattttcact ttttcagtctcgctggaaatcaaggaggacgatgggaaaggctgcttcagtgccgttccgaaggacaaagacaggcagtg cttcaagttacggcaaggaatcgacaagaagattgtcctctacgtgcaacagaccacgaacaaagagctggccatcgaga gatgtttcggcctcctcctcagtcccggaaaagacgtgcagagcggagacatgcatttgctagatttggagtctatgggg aaaagctcggatgggaagtcgtacatcatcaccgggagttggaacaccaagtctccgcacttccaaattgtgaacgagga gacgcccaaagataacgacgagcctctgctcagtggctcaggggacgtctccaaagagtgtgcggagaagatcctggaga cgtggggagacctactttccaagtggcacttgaacctgagcgtgcggcccaaaaccttgtctgccttggtgaggagcggc gtccccgaagctctccggggcgaagtgtggcagcttctggcaggttgtcacaacaacgatttcctggtggagaagtatcg gattctcatcacaaaggccatcatcatcgtattcctgaccgtcctcatcatctcgggcaacttggtggtcatcttcgtct tccactgcgcgccgctgctgaaccaccacaccaccagctacttcatccagaccatggcctacgccgacctgctggtgggg gtgagctgcctggtgccctccctctccctgctgcaccacccgctggccttcctgcccgaggcgctggtctgcaaggtctt cggctacgtggtctcggtgctgaagagcgtctccatgacctcgctggcctgcatcagcctggaccgctacatcgccatca ccaagcccctcagctacagcacgctggtcaccccctgccggctgcgggcctgcatcctgctgctctggctctactcgggc gccgtcttcctgcccgccttcttcgagtggggcaagccgggctaccacggggacatcttccgctggtgcgccgacttttg ggacacccgggccatcttcaccctcttcatcgtggtcatgctctacgcgccggccgccttggtggtctgcttcacctact tcagcatcttccggatctgccagcaacacacccgggagatcaacgaacggcgggtgcgcttcagctcccaggaaggggag gcggccgagggccagccgtgcccggacaagcactacgccatggtcctcctgcgcatcaccagcgtcttctacatcctttg gctcccgtacatcatctactttctcttggagagctcctccgtctaccacagccgcctggccgccttcctgaccacctggc tggccatcagcaatagcttctgcaactgtgtcatctacagcttgtccaacagtgtctttcagaaagggttgaagcacctc tggagcgccctttgcaccccgtgcgcccggcaccggccggccaaggactcttccgcagcctctcgcagcaaaagaccctc caacggctgtcacgcctgacgggggggggagggctctgccctgaactcaagacatccagatgtgcaaaaagaaagaggga gagagaagagacccacgtgcctctctcgccgggaatgctgctgttttccaaggatttggggaggatttccaccagcacgg ggctgctgccgggtttctgggtttcgcctcctccgggaaggtcccggtgggactttgaccnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatttaaaagtaccgtatttgcatttttcttaaaaaaaaaagaaaaaaa gaaaaaaaaagaaagaaacttaactgaaatgtctgtgtagtaaaaaaattgaatgactttggaacagaccaaattagcaa atgaataaagtgtttccttttttcccccctc |
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Protein
| Protein ID | habu1_s16115_g21617.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21617.t1 MSRDVGRVLLAWNVPLALSKIIGNGSEQQLQKELEDILMDPPMEEPSNDREGGEESPSQDGEGDEPVLLEASASSTINPV SVTGPAMPEMRLPVKAAQGDSEESSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMAILRSQGQTSVDVTLSVP NVSEGTVSRILYSFATAFRRSAKQVPLAAPVTPEMPDSDIFTFSVSLEIKEDDGKGCFSAVPKDKDRQCFKLRQGIDKKI VLYVQQTTNKELAIERCFGLLLSPGKDVQSGDMHLLDLESMGKSSDGKSYIITGSWNTKSPHFQIVNEETPKDNDEPLLS GSGDVSKECAEKILETWGDLLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDFLVEKYRILITKAIIIVF LTVLIISGNLVVIFVFHCAPLLNHHTTSYFIQTMAYADLLVGVSCLVPSLSLLHHPLAFLPEALVCKVFGYVVSVLKSVS MTSLACISLDRYIAITKPLSYSTLVTPCRLRACILLLWLYSGAVFLPAFFEWGKPGYHGDIFRWCADFWDTRAIFTLFIV VMLYAPAALVVCFTYFSIFRICQQHTREINERRVRFSSQEGEAAEGQPCPDKHYAMVLLRITSVFYILWLPYIIYFLLES SSVYHSRLAAFLTTWLAISNSFCNCVIYSLSNSVFQKGLKHLWSALCTPCARHRPAKDSSAASRSKRPSNGCHA |
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