Gene
| Gene Model ID | habu1_s16115_g21620 |
|---|---|
| Locus | habu1_scaffold16115 : 166566 ... 174916 : + |
| To GenomeBrowser | habu1_scaffold16115:166566..174916 |
| Genes list of scaffold | habu1_scaffold16115 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21620.t1 | 1 | 1 | Phosducin | 41 | 293 | 0.0 | 409.0 | 0.0 | 0.0 | 408.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21620.t1 | gi|602632937|ref|XP_007423355.1| | PREDICTED: phosducin-like protein [Python bivittatus] | 0.0 |
| habu1_s16115_g21620.t1 | gi|641765306|ref|XP_008167662.1| | PREDICTED: phosducin-like protein [Chrysemys picta bellii] | 0.0 |
| habu1_s16115_g21620.t1 | gi|723543899|ref|XP_010311830.1| | PREDICTED: phosducin-like protein [Balearica regulorum gibbericeps] | 0.0 |
| habu1_s16115_g21620.t1 | gi|704540794|ref|XP_010193273.1| | PREDICTED: phosducin-like protein [Mesitornis unicolor] | 0.0 |
| habu1_s16115_g21620.t1 | gi|701376322|ref|XP_009963962.1| | PREDICTED: phosducin-like protein [Tyto alba] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.9 |
| Venom grand-1 | 27.6 |
| Pit, infrared sensing | 19.3 |
| Nose | 17.3 |
| Brain-1 | 7.6 |
| Eye | 24.0 |
| fetal fibroblast | 23.6 |
| venom gland-2 | 25.1 |
| Brain-2 | 7.7 |
| Spleen | 23.7 |
| Lung | 46.4 |
| Liver | 58.7 |
| Kidney | 73.0 |
| Pancreas | 35.3 |
| Small intestine | 35.8 |
| Large intestine | 29.1 |
| Stomach | 30.9 |
| heart | 15.1 |
| ovary | 20.1 |
| cheek muscle | 29.3 |
Transcript
| Transcript ID | habu1_s16115_g21620.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21620.t1 gcgaatggagctaggtatgctttgaatggcagcgggggcagaaaagaagacggaagtgtccatcaaggcaacacgtggat cagcccacgcagctgcccccacgatgaccaccctggacgacaagctgctgggagagaaactccagtactactacagcagc agcgacgaggaggaggacagcgagaaggacgacaacgaggagtcccccccgggtcacgatgcggcgatgccggaagaggt ggccctgagcgccgatggtagcgccataaacacaggccccaaaggggtgatcaacgactggaggaggttcaaacagctgg agacggagcagcgggaggagcaatgccgggagatggagaggctgatcaagaaactctccatgacctgccagtcacacctg gatgaagagaaggacaagcagaagcagaaggagctgcaggagaagctgaacgacaagctggcgctgcaccaggaaacgga cgacgaggagttcctgcagcagtaccgcaagcagcgcatggaggaaatgcgccagcagctgcacccgggccagcagttca agcaggtcttcgagatccacagcggggaggccttcctggacacggtggacagaggcaacaagaagacgctggtgatgatc cacatctacgaggaccacctccccggggccgaagccctggacggctgcatgctctgcctggccgccgagtaccccacggt gaagttctgccgggtgcgcagctccctgatcggcaccagctcccgcttcaccggcaacgccttgccggccctgctggtct acaagggtggggagctgatcggcaacttcgtccgcatcaccgaccagctgggcgaagacttcttcgccgcggacttagaa gccttcctgcaggagttcagtctgctgccggagaaggacgtggtgctctacacctccatttgcagcgctgctgcctgcta cggcgaagacagcgacttggagatagactgagggacgccagagcgccgggcccctggtctcccccctccctccgggggcc ctggctagtttgtaaagggtagttgttcacctcggagccccccccccaaaaaaccccatctggcaggtctggctgctgct ttggtgggggtctagggcaaggattgactgtggaagttttcttcacgcctagcaagaacttaaaaacattttcttgatgc aataaaagattaaaacccgaacttttct |
|
Protein
| Protein ID | habu1_s16115_g21620.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21620.t1 MTTLDDKLLGEKLQYYYSSSDEEEDSEKDDNEESPPGHDAAMPEEVALSADGSAINTGPKGVINDWRRFKQLETEQREEQ CREMERLIKKLSMTCQSHLDEEKDKQKQKELQEKLNDKLALHQETDDEEFLQQYRKQRMEEMRQQLHPGQQFKQVFEIHS GEAFLDTVDRGNKKTLVMIHIYEDHLPGAEALDGCMLCLAAEYPTVKFCRVRSSLIGTSSRFTGNALPALLVYKGGELIG NFVRITDQLGEDFFAADLEAFLQEFSLLPEKDVVLYTSICSAAACYGEDSDLEID |
|