Gene
| Gene Model ID | habu1_s16115_g21622 |
|---|---|
| Locus | habu1_scaffold16115 : 194436 ... 207563 : + |
| To GenomeBrowser | habu1_scaffold16115:194436..207563 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| erythrocyte band 7 integral membrane protein isoform x3 | GO:0005615 GO:0005887 GO:0031982 GO:0034765 GO:0042802 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21622.t1 | 1 | 1 | SDA1 | 24 | 60 | 1.1e-06 | 28.2 | 2.0e-09 | 1.1e-06 | 28.2 |
| habu1_s16115_g21622.t1 | 1 | 1 | Band_7 | 80 | 195 | 7.3e-18 | 65.1 | 1.3e-20 | 7.3e-18 | 65.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21622.t1 | gi|694936882|ref|XP_009455487.1| | PREDICTED: erythrocyte band 7 integral membrane protein isoform X3 [Pan troglodytes] | 0.0 |
| habu1_s16115_g21622.t1 | gi|602629235|ref|XP_007421545.1| | PREDICTED: erythrocyte band 7 integral membrane protein-like [Python bivittatus] | 0.0 |
| habu1_s16115_g21622.t1 | gi|507932388|ref|XP_004677435.1| | 0.0 | |
| habu1_s16115_g21622.t1 | gi|611976278|ref|XP_007474643.1| | PREDICTED: erythrocyte band 7 integral membrane protein isoform X2 [Monodelphis domestica] | 0.0 |
| habu1_s16115_g21622.t1 | gi|471370327|ref|XP_004375676.1| | PREDICTED: erythrocyte band 7 integral membrane protein [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 42.8 |
| Venom grand-1 | 8.8 |
| Pit, infrared sensing | 50.4 |
| Nose | 165.8 |
| Brain-1 | 11.6 |
| Eye | 30.2 |
| fetal fibroblast | 6.4 |
| venom gland-2 | 5.7 |
| Brain-2 | 23.6 |
| Spleen | 91.6 |
| Lung | 75.8 |
| Liver | 79.8 |
| Kidney | 18.4 |
| Pancreas | 9.0 |
| Small intestine | 37.2 |
| Large intestine | 77.6 |
| Stomach | 8.0 |
| heart | 13.7 |
| ovary | 3.0 |
| cheek muscle | 13.5 |
Transcript
| Transcript ID | habu1_s16115_g21622.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21622.t1 gggcggagtcttgtccttgctgtccggctgccatgtccttggctgcgctgctccacgcggaccgcgcccaggggcgactc tcctccagaggtgctgctgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagcttcctcttaatggttcatccggc agccttggtttctgtggctggctcctggttataatttcatttatattcgtagccgccaccgcccctatttccatttggtt gtgcataaagggctgttttttgtgttgccttgtacggacaacatcatcaaagtggacatgaggaccatctcctttgatat tccaccgcaggaaattctcaccaaggattccgtgacggtgaacgtggatggggtggtctactatcgggtgcagaatgcca ccctcgccgtcgccaacatcaccaacgcagactcagcgactcggctgctggctcagacgacgctcaggaacgtgctgggg accaaaaacctttctcagatcctctccgaccgggaggaaatcgcacacagcatgcaagtcatcgctgcggagggcgaaat gaacgcttcccgggcgctgaaggaagcctcgatagtcatctcggagtctcccgccgctctccaactccgctatctgcaga ccctcaccactattgcagctgagaaaaattccaccatcattttccccctgcccatagacatgctgcaagggattatggca atgaggcactaaccaaggcagccacgttggtgaaggagaggagaagctagattaaaagcaaaagtcagccttcggcta |
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Protein
| Protein ID | habu1_s16115_g21622.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21622.t1 MSLAALLHADRAQGRLSSRGAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEASSXWFIRQPWFLWLAPGY NFIYIRSRHRPYFHLVVHKGLFFVLPCTDNIIKVDMRTISFDIPPQEILTKDSVTVNVDGVVYYRVQNATLAVANITNAD SATRLLAQTTLRNVLGTKNLSQILSDREEIAHSMQVIAAEGEMNASRALKEASIVISESPAALQLRYLQTLTTIAAEKNS TIIFPLPIDMLQGIMAMRH |
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