Gene
| Gene Model ID | habu1_s16115_g21623 |
|---|---|
| Locus | habu1_scaffold16115 : 210146 ... 216588 : + |
| To GenomeBrowser | habu1_scaffold16115:210146..216588 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| erythrocyte band 7 integral membrane protein | GO:0043226 GO:0044421 GO:0044425 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21623.t2 | 1 | 1 | Band_7 | 52 | 170 | 4.6e-19 | 69.0 | 1.2e-22 | 5.9e-19 | 68.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21623.t2 | gi|38016911|ref|NP_004090.4| | erythrocyte band 7 integral membrane protein isoform a [Homo sapiens] | 0.0 |
| habu1_s16115_g21623.t2 | gi|488596914|ref|XP_004483629.1| | PREDICTED: erythrocyte band 7 integral membrane protein [Dasypus novemcinctus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 1.2 |
| Nose | 1.3 |
| Brain-1 | 2.5 |
| Eye | 1.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.6 |
| Brain-2 | 2.4 |
| Spleen | 19.0 |
| Lung | 4.1 |
| Liver | 1.4 |
| Kidney | 0.6 |
| Pancreas | 0.9 |
| Small intestine | 3.7 |
| Large intestine | 4.0 |
| Stomach | 0.6 |
| heart | 1.3 |
| ovary | 0.1 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s16115_g21623.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21623.t1 cgtccgccaacctgggaaacagcgccgtgggactgatgggcgacatggaaaggggcacccggaggaatccagacggtctg aaattggacgggaactttgaggaaagctacggaccgtgtgaatggatcctcattatcctaatgtatatttttgtaatttt aaccttccccataaccatctggatgtgcatagaggttgttatgcaatatgaacgagtggtcatttttaggctgggccata tacgaaaaggagggtccaaaggtcctggagtctattttattttgcctctcctagattatgcggtcaaagtggatatgcgg acgatctcgttcgatatatctccccaggaaattcttaccaaagattcagtgacgatcatggtggacggcgtcgtttatta ccgggtttggaatgctattctttccgtcgccaacgtgctttacacggacccggccactcggctcctggctcaaaccacct tgaggaacatcttgggaaccaaagacctggctcagattctctccgaccgagaggagattgcccagagcatgcaggtgatc gcggcggagggcgaaatgaacgcctcgcgggctctgcagaaggccgcagccatcatctgcgagaacccggccgctctgca gcttcgctacctgcaaactctgaccaccatcgccgcggagaagaattccaccatcatcttccctcttcctttagacatat tgcacggttttatccctccgaagcagtagctgggacgaggaggaaaaaagaaagaaaaagagacaacagctgctttcctt ctccaagccctttgaataaaaacctgcgtgcacgttacacag |
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| Transcript ID | habu1_s16115_g21623.t2 |
| Definition | - |
>habu1_s16115_g21623.t2 cgtccgccaacctgggaaacagcgccgtgggactgatgggcgacatggaaaggggcacccggaggaatccagacggtctg aaattggacgggaactttgaggaaagctacggaccgtgtgaatggatcctcattatcctaatgtatatttttgtaatttt aaccttccccataaccatctggatgtgcatagaggttgttatgcaatatgaacgagtggtcatttttaggctgggccata tacgaaaaggagggtccaaaggtcctggagtctattttattttgcctctcctagattatgcggtcaaagtggatatgcgg acgatctcgttcgatatatctccccaggaaattcttaccaaagattcagtgacgatcatggtggacggcgtcgtttatta ccgggtttggaatgctattctttccgtcgccaacgtgctttacacggacccggccactcggctcctggctcaaaccacct tgaggaacatcttgggaaccaaagacctggctcagattctctccgaccgagaggagattgcccagagcatgcaggtgatc gcggcggagggcgaaatgaacgcctcgcgggctctgcagaaggccgcagccatcatctgcgagaacccggccgctctgca gcttcgctacctgcaaactctgaccaccatcgccgcggagaagaattccaccatcatcttccctcttcctttagacatat tgcacggttttatccctccgaagcagtagctgggacgaggaggaaaaaagaaagaaaaagagacaacagctgctttcctt ctccaagccctttgaataaaaacctgcgtgcacgttacacag |
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Protein
| Protein ID | habu1_s16115_g21623.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21623.t1 MGDMERGTRRNPDGLKLDGNFEESYGPCEWILIILMYIFVILTFPITIWMCIEVVMQYERVVIFRLGHIRKGGSKGPGVY FILPLLDYAVKVDMRTISFDISPQEILTKDSVTIMVDGVVYYRVWNAILSVANVLYTDPATRLLAQTTLRNILGTKDLAQ ILSDREEIAQSMQVIAAEGEMNASRALQKAAAIICENPAALQLRYLQTLTTIAAEKNSTIIFPLPLDILHGFIPPKQ |
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| Protein ID | habu1_s16115_g21623.t2 |
| Definition | - |
>habu1_s16115_g21623.t2 MERGTRRNPDGLKLDGNFEESYGPCEWILIILMYIFVILTFPITIWMCIEVVMQYERVVIFRLGHIRKGGSKGPGVYFIL PLLDYAVKVDMRTISFDISPQEILTKDSVTIMVDGVVYYRVWNAILSVANVLYTDPATRLLAQTTLRNILGTKDLAQILS DREEIAQSMQVIAAEGEMNASRALQKAAAIICENPAALQLRYLQTLTTIAAEKNSTIIFPLPLDILHGFIPPKQ |
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