Gene
| Gene Model ID | habu1_s16115_g21626 |
|---|---|
| Locus | habu1_scaffold16115 : 265076 ... 274919 : + |
| To GenomeBrowser | habu1_scaffold16115:265076..274919 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-14 isoform x1 | GO:0005525 GO:0005765 GO:0006895 GO:0007264 GO:0008543 GO:0009790 GO:0015031 GO:0016459 GO:0019003 GO:0031489 GO:0032456 GO:0032880 GO:0045335 GO:0055037 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21626.t1 | 1 | 1 | Arf | 12 | 134 | 1.4e-12 | 47.2 | 1.5e-15 | 1.8e-12 | 46.8 |
| habu1_s16115_g21626.t1 | 1 | 1 | Ras | 13 | 173 | 0.0 | 204.4 | 0.0 | 0.0 | 204.1 |
| habu1_s16115_g21626.t1 | 1 | 1 | Miro | 14 | 127 | 2.1e-19 | 70.1 | 2.8e-22 | 3.2e-19 | 69.5 |
| habu1_s16115_g21626.t1 | 1 | 1 | MMR_HSR1 | 15 | 113 | 6.5e-06 | 26.0 | 7.4e-09 | 8.4e-06 | 25.7 |
| habu1_s16115_g21626.t1 | 1 | 1 | GTP_EFTU | 52 | 171 | 5.1e-06 | 26.0 | 1.0e-07 | 0.00012 | 21.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21626.t1 | gi|657794391|ref|XP_008324138.1| | PREDICTED: ras-related protein Rab-14 [Cynoglossus semilaevis] | 0.0 |
| habu1_s16115_g21626.t1 | gi|697500485|ref|XP_009679352.1| | PREDICTED: ras-related protein Rab-14 isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s16115_g21626.t1 | gi|589952319|ref|XP_006988804.1| | PREDICTED: ras-related protein Rab-14 isoform X1 [Peromyscus maniculatus bairdii] | 0.0 |
| habu1_s16115_g21626.t1 | gi|514790873|ref|XP_005030090.1| | PREDICTED: ras-related protein Rab-14 isoform X2 [Anas platyrhynchos] | 0.0 |
| habu1_s16115_g21626.t1 | gi|671012434|ref|XP_008697044.1| | PREDICTED: ras-related protein Rab-14 isoform X1 [Ursus maritimus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 29.6 |
| Venom grand-1 | 20.5 |
| Pit, infrared sensing | 26.5 |
| Nose | 32.7 |
| Brain-1 | 36.8 |
| Eye | 34.9 |
| fetal fibroblast | 61.5 |
| venom gland-2 | 39.7 |
| Brain-2 | 41.7 |
| Spleen | 20.4 |
| Lung | 30.3 |
| Liver | 25.4 |
| Kidney | 30.6 |
| Pancreas | 19.8 |
| Small intestine | 26.3 |
| Large intestine | 30.0 |
| Stomach | 27.5 |
| heart | 16.6 |
| ovary | 154.3 |
| cheek muscle | 35.8 |
Transcript
| Transcript ID | habu1_s16115_g21626.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21626.t1 cgccgccgccgccgcctcctcagccaagctgcccagtcaccagcccctcgagcccagtgccacaatggcaactgcacctt acaactattcctacatctttaaatacatcattattggtgatatgggtgtaggaaaatcgtgcttgctccatcagtttaca gaaaagaagtttatggcagattgtccccatacaattggagtcgagtttggtaccaggataattgaagtgagcggccaaaa aattaagctgcagatctgggacacggcgggacaagagaggtttagagcggtcacacggagctactacagaggagcagcag gggcccttatggtttatgatatcactagaagaagtacatataaccatttaagcagctggctgacagacgcaaggaatcta actaaccccaatactgtgatcatccttataggaaataaagcagacctggaagcccagagagacgtgacatacgaggaagc caaacagtttgctgaagagaacggcttgctgttccttgaagcgagcgcaaaaacaggtgagaacgtggaagacgcgttcc tagaggccgccaagaaaatctaccagaatatccaagacgggagcctggatctgaacgcggcagagtcaggggtacagcac aagccttcagctccacagggcggccggctaaccaacgaaccccagccccaaagagaaggctgtggctgctagtgacctcg gttccttggctctgtttgtgacctttcacctctgttaaagagcagtgctttttggggctgcttccgtttttcctctgcac atcttaccaggtttaattaaaactcctgaggcaaaagagtttaacacagtactaaactgctaaagaataaaataagagaa aacttagatgtaa |
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Protein
| Protein ID | habu1_s16115_g21626.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21626.t1 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY YRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGEN VEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTNEPQPQREGCGC |
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