Gene
| Gene Model ID | habu1_s16115_g21630 |
|---|---|
| Locus | habu1_scaffold16115 : 396886 ... 403936 : + |
| To GenomeBrowser | habu1_scaffold16115:396886..403936 |
| Genes list of scaffold | habu1_scaffold16115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 26s proteasome non-atpase regulatory subunit 5-like | GO:0000502 GO:0043248 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s16115_g21630.t1 | 1 | 1 | Proteasom_PSMB | 11 | 508 | 0.0 | 544.7 | 0.0 | 0.0 | 544.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s16115_g21630.t1 | gi|602629211|ref|XP_007421534.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s16115_g21630.t1 | gi|602629209|ref|XP_007421533.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s16115_g21630.t1 | gi|637370293|ref|XP_008121936.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like [Anolis carolinensis] | 0.0 |
| habu1_s16115_g21630.t1 | gi|637378005|ref|XP_008123267.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like [Anolis carolinensis] | 0.0 |
| habu1_s16115_g21630.t1 | gi|729745328|ref|XP_010569075.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 17.4 |
| Venom grand-1 | 35.1 |
| Pit, infrared sensing | 11.9 |
| Nose | 10.8 |
| Brain-1 | 6.5 |
| Eye | 9.4 |
| fetal fibroblast | 29.2 |
| venom gland-2 | 45.4 |
| Brain-2 | 10.7 |
| Spleen | 43.2 |
| Lung | 42.3 |
| Liver | 39.4 |
| Kidney | 100.1 |
| Pancreas | 108.4 |
| Small intestine | 74.3 |
| Large intestine | 31.0 |
| Stomach | 46.0 |
| heart | 25.7 |
| ovary | 19.4 |
| cheek muscle | 32.9 |
Transcript
| Transcript ID | habu1_s16115_g21630.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21630.t1 gcgagacgttccctcctctttccaagatggcggcggctgaggtagacgctgctctggcgctgctgagccgggtcgctacg ctggaagagccgctggaggagctgcgggccctgcgggcggccgtgcagactctgcccctcggcgccctccgcgagcgagg gcccggctaccccctggctgggctcttcgtcctcctggcccgcggggagagtgagcaaatctctttgtgtgtctccatct tggagagattcctgcaagtcatggatcccttggatgtgatccaaaactttggggaagaacttcagaagggactgttccac cctgatgattcagtcaaaatcctaaccatctcccaagttggaagagttgttgaagaccccgttgccatcagagaaatcct taacactcctgaattattgaggcagattatctattgcattgctgcggagaaaatagcagtggcaaaagaggccatcaaat ctttgtccaggatagcacaatcgcctgagggtttagaagttttactggcggggaatttgctgatcgacttgaaaaacgtc atggcgaagagcgacatcatacgttatcgcgtctatgagctagtggtcaatatttcctccacgtcggtggactctctgaa ctactgcgtgaacagcggtttaatagcggagatgattggagaactgacgggaaacgacgtgcttgtcagagcgacttgta tagagatggtgacctcactcgcccacactcaacatggacgacagtatcttgcccagcaaggcatcatcgacaagatttcc aatataatcattggagctgattcggatcccttctccagtttttacctgccaggttttgttaagttttttggcaacctggc catcgtggacagcccccagcagatctgcgagcagtaccctgccttcgtcgagaaggtcttcaacatggccgaagtccaag acccaaccttgtttggcgtggcggcggacacggtcgggatcttgggctcaaacgtggagggcaagctggtgctccagaag acaggcagtcggttccatcgggtgctaaacagaatcgggcatcaaataaagaacgccccggctgagatgagaatccgatg tctggatgctgtttcatcccttttgtacttgcagcctgaacagcaaaccgaagatcttctccggatgacagaatcgtggt tctcctctctatccaaccagcccttggaactcttcaaaagcatcagtactcagcctttccctgatctccactgcggagcc ttgaaagtcttcactgccattgcaaatcaaccttgggcccagcaggagatgttggccagtcctggctttgtggaatacat cgtggaccgatcggtggaaccagataaagcttctaaggaggccaaatacgaacttgtcaagactttggttaactcaaaga cgacggccgatattttgggaaaccagcattacttaagattgaaggcttatatgcgtgaggggccgtattacgttaaggct gtctcaactactgctgtagaaggagctgagtagctttggaagatgtaattttaagctactgttcagaaattccagggcta actaaactttctggattcctggaaggtgaggctggcctgttgctttgtagagaggagaaggaaagggtgggaaatattaa cttggtatgaggggggttttttttggtttggttgtttttttgacattgaaatgccagttggtttgaaataggaagatttc ctaggtattttcccgatggaaaacacaggttccaccatttcacgctccttaaaatccaagaaaccattaagagagactct ataaagtataaaggaaactatttttcctaggataatgttgcaggaccctgggatgtgtatattcgccttcctttgtgaaa aacatttatttgtttgtttgttttttgttcatcacacgggttgttttaccatctgggtttaagatttgtgctcagaggga ttcatttttcatcacctcctcagtgttggtttttttgatgttccaattgccgtgacacaaatattcctccacacaacttt acgtagggaacaagcaaactgatttaatccgggttcttaaaagcaaatagatggaagaataaagaatatatcttacataa aaggc |
|
Protein
| Protein ID | habu1_s16115_g21630.t1 |
|---|---|
| Definition | - |
>habu1_s16115_g21630.t1 MAAAEVDAALALLSRVATLEEPLEELRALRAAVQTLPLGALRERGPGYPLAGLFVLLARGESEQISLCVSILERFLQVMD PLDVIQNFGEELQKGLFHPDDSVKILTISQVGRVVEDPVAIREILNTPELLRQIIYCIAAEKIAVAKEAIKSLSRIAQSP EGLEVLLAGNLLIDLKNVMAKSDIIRYRVYELVVNISSTSVDSLNYCVNSGLIAEMIGELTGNDVLVRATCIEMVTSLAH TQHGRQYLAQQGIIDKISNIIIGADSDPFSSFYLPGFVKFFGNLAIVDSPQQICEQYPAFVEKVFNMAEVQDPTLFGVAA DTVGILGSNVEGKLVLQKTGSRFHRVLNRIGHQIKNAPAEMRIRCLDAVSSLLYLQPEQQTEDLLRMTESWFSSLSNQPL ELFKSISTQPFPDLHCGALKVFTAIANQPWAQQEMLASPGFVEYIVDRSVEPDKASKEAKYELVKTLVNSKTTADILGNQ HYLRLKAYMREGPYYVKAVSTTAVEGAE |
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