Gene
| Gene Model ID | habu1_s17097_g21880 |
|---|---|
| Locus | habu1_scaffold17097 : 1 ... 136296 : + |
| To GenomeBrowser | habu1_scaffold17097:1..136296 |
| Genes list of scaffold | habu1_scaffold17097 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g protein-activated inward rectifier potassium channel 2 | GO:0005794 GO:0008076 GO:0015467 GO:0034765 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17097_g21880.t2 | 1 | 1 | IRK | 70 | 389 | 0.0 | 544.3 | 0.0 | 0.0 | 543.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s17097_g21880.t2 | gi|637283618|ref|XP_008105737.1| | PREDICTED: G protein-activated inward rectifier potassium channel 2 [Anolis carolinensis] | 0.0 |
| habu1_s17097_g21880.t2 | gi|663270740|ref|XP_008494859.1| | PREDICTED: G protein-activated inward rectifier potassium channel 2 [Calypte anna] | 0.0 |
| habu1_s17097_g21880.t2 | gi|669281954|ref|XP_008633514.1| | PREDICTED: G protein-activated inward rectifier potassium channel 2 [Corvus brachyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 7.4 |
| Eye | 1.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 5.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s17097_g21880.t1 |
|---|---|
| Definition | - |
>habu1_s17097_g21880.t1 gtggggaaaaaccaaactgattcattggagccaagacttcggcggaggatggaagctgccaacagcagcgccgggtccct gtaaaagccggcgattctttcttctcgtttccttttgtttctctttctttcttaaattttaactgtttcaccttccattc ttgagcggcagatgagcctgctgtgttccgaaagagaaaaaatcatgatcgagtgagtgaaaacgagcagcaaacaggag gatctcaaacagaaagtgaaaaagatggccaaattgacagaatcaatgactaatgtgcttgaaggagactcaatggagca ggacgtggaaagccctgttacaattcatccacccaagttgcccaaacaggccagagaagatctgccaaagcatttaagca aagagaatgccaaaagaaaaatccagaggtatgttaggaaagatggaaaatgcaacgtccaccatggaaacgtgagagag acttatcgctatctgaccgatatcttcactaccttggtcgacctcaagtggagattcaaccttttcatatttgtcttggt ttatactgtgacttggttattctttggattcatctggtggctaattgcttacatccgaggagatatggagcacataggag ataagaaatggacaccgtgtgttagtaacctcaatggatttgtctcagcctttttattctctatagagacagaaactaca attgggtatggttatcgggttatcacagacaaatgtcctgaaggaattatcctgcttttagttcagtctgttttagggtc tattgtgaatgctttcatggttggctgcatgtttgtaaaaatatcacagcccaagaagagagcagaaactctggtgtttt ctaccaatgctgtaatttctatgcgggatggaaagctatgtttgatgtttcgagttggggatcttagaaattcgcacatt gtggaagcatcaatacgagccaagctgatcaaatcgaaacagacaaaggagggggaatttatacctctcaatcaaacaga tatcaatgtaggttattatactggggatgatcgactgtttttggtttcaccactgatcatcagccatgaaataaaccaac agagtcctttctgggagatttccaaagcccagttgcccaaagaggaattagaaatagttgtgatcctagaaggaatggtg gaagcgacagggatgacatgccaagcccgaagttcttacattaccagtgaaattctctggggttatcgtttcacacctgt tctcaccctagaggatggattctatgaagttgattataataatttccatgagacctatgaaaccaacaccccatcttata gcgccaaagaattggctgagatggccagtcgagcagaattaccccttacttggtctgtctcaagccagttagatcagcat gctgaaatggaggctggagaggaagctaagagccatgaagaacaaacagaaaggaatggtgatgtggccaacttagagaa tgaatccaaagtttagaactgaacgatgggagagaaaactttaacactttcaaaagaaggggggaaaacagcagtctaaa atgtttattgtctgtccatgcatcaataagatcagtggagatttgggttgaagctgcaatattgtatattttcctgtttt gttttaccttttgttgttccactttttagttgatgaaatcaatattctcatacataagcaagtggcttttgttttgtttt gataacaaaaagcaaaaacacatagatctgggcaaaaacgaatgaagaatctgtaggtaataattattactgacctgagc tttaactccagatttatatatatatatatatatttctccaaaatagatttaaatgatatgcctttattgcagctttaaaa cccaagatgtgcagaaagatctgcagatcaatacgatactgtacatatgccttctgtaatttctttctctttcagtttaa taataaatccagcatgtacaaaagtactg |
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| Transcript ID | habu1_s17097_g21880.t2 |
| Definition | - |
>habu1_s17097_g21880.t2 atgagcctgctgtgttccgaaagagaaaaaatcatgatcgagtgagtgaaaacgagcagcaaacagctaatgtgcttgaa ggagactcaatggagcaggacgtggaaagccctgttacaattcatccacccaagttgcccaaacaggccagagaagatct gccaaagcatttaagcaaagagaatgccaaaagaaaaatccagaggtatgttaggaaagatggaaaatgcaacgtccacc atggaaacgtgagagagacttatcgctatctgaccgatatcttcactaccttggtcgacctcaagtggagattcaacctt ttcatatttgtcttggtttatactgtgacttggttattctttggattcatctggtggctaattgcttacatccgaggaga tatggagcacataggagataagaaatggacaccgtgtgttagtaacctcaatggatttgtctcagcctttttattctcta tagagacagaaactacaattgggtatggttatcgggttatcacagacaaatgtcctgaaggaattatcctgcttttagtt cagtctgttttagggtctattgtgaatgctttcatggttggctgcatgtttgtaaaaatatcacagcccaagaagagagc agaaactctggtgttttctaccaatgctgtaatttctatgcgggatggaaagctatgtttgatgtttcgagttggggatc ttagaaattcgcacattgtggaagcatcaatacgagccaagctgatcaaatcgaaacagacaaaggagggggaatttata cctctcaatcaaacagatatcaatgtaggttattatactggggatgatcgactgtttttggtttcaccactgatcatcag ccatgaaataaaccaacagagtcctttctgggagatttccaaagcccagttgcccaaagaggaattagaaatagttgtga tcctagaaggaatggtggaagcgacagggatgacatgccaagcccgaagttcttacattaccagtgaaattctctggggt tatcgtttcacacctgttctcaccctagaggatggattctatgaagttgattataataatttccatgagacctatgaaac caacaccccatcttatagcgccaaagaattggctgagatggccagtcgagcagaattaccccttacttggtctgtctcaa gccagttagatcagcatgctgaaatggaggctggagaggaagctaagagccatgaagaacaaacagaaaggaatggtgat gtggccaacttagagaatgaatccaaagtttagaactgaacgatgggagagaaaactttaacactttcaaaagaaggggg gaaaacagcagtctaaaatgtttattgtctgtccatgcatcaataagatcagtggagatttgggttgaagctgcaatatt gtatattttcctgttttgttttaccttttgttgttccactttttagttgatgaaatcaatattctcatacataagcaagt ggcttttgttttgttttgataacaaaaagcaaaaacacatagatctgggcaaaaacgaatgaagaatctgtaggtaataa ttattactgacctgagctttaactccagatttatatatatatatatatatttctccaaaatagatttaaatgatatgcct ttattgcagctttaaaacccaagatgtgcagaaagatctgcagatcaatacgatactgtacatatgccttctgtaatttc tttctctttcagtttaataataaatccagcatgtacaaaagtactg |
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Protein
| Protein ID | habu1_s17097_g21880.t1 |
|---|---|
| Definition | - |
>habu1_s17097_g21880.t1 MAKLTESMTNVLEGDSMEQDVESPVTIHPPKLPKQAREDLPKHLSKENAKRKIQRYVRKDGKCNVHHGNVRETYRYLTDI FTTLVDLKWRFNLFIFVLVYTVTWLFFGFIWWLIAYIRGDMEHIGDKKWTPCVSNLNGFVSAFLFSIETETTIGYGYRVI TDKCPEGIILLLVQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTNAVISMRDGKLCLMFRVGDLRNSHIVEASIRAK LIKSKQTKEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQ ARSSYITSEILWGYRFTPVLTLEDGFYEVDYNNFHETYETNTPSYSAKELAEMASRAELPLTWSVSSQLDQHAEMEAGEE AKSHEEQTERNGDVANLENESKV |
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| Protein ID | habu1_s17097_g21880.t2 |
| Definition | - |
>habu1_s17097_g21880.t2 EPAVFRKRKNHDRVSENEQQTANVLEGDSMEQDVESPVTIHPPKLPKQAREDLPKHLSKENAKRKIQRYVRKDGKCNVHH GNVRETYRYLTDIFTTLVDLKWRFNLFIFVLVYTVTWLFFGFIWWLIAYIRGDMEHIGDKKWTPCVSNLNGFVSAFLFSI ETETTIGYGYRVITDKCPEGIILLLVQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTNAVISMRDGKLCLMFRVGDL RNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVI LEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNNFHETYETNTPSYSAKELAEMASRAELPLTWSVSS QLDQHAEMEAGEEAKSHEEQTERNGDVANLENESKV |
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