Gene
| Gene Model ID | habu1_s17097_g21884 |
|---|---|
| Locus | habu1_scaffold17097 : 309588 ... 352490 : - |
| To GenomeBrowser | habu1_scaffold17097:309588..352490 |
| Genes list of scaffold | habu1_scaffold17097 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17097_g21884.t1 | 1 | 1 | zf-rbx1 | 1481 | 1542 | 3.4e-08 | 33.4 | 3.3e-11 | 3.4e-08 | 33.4 |
| habu1_s17097_g21884.t1 | 1 | 1 | zf-C3HC4_3 | 1499 | 1545 | 3.5e-06 | 26.5 | 3.3e-09 | 3.5e-06 | 26.5 |
| habu1_s17097_g21884.t1 | 1 | 1 | zf-RING_2 | 1501 | 1542 | 3.3e-11 | 42.8 | 3.1e-14 | 3.3e-11 | 42.8 |
| habu1_s17097_g21884.t1 | 1 | 1 | zf-C3HC4_2 | 1502 | 1541 | 2.3e-06 | 27.5 | 2.1e-09 | 2.3e-06 | 27.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s17097_g21884.t1 | gi|602633025|ref|XP_007423399.1| | PREDICTED: E3 ubiquitin-protein ligase TTC3 [Python bivittatus] | 0.0 |
| habu1_s17097_g21884.t1 | gi|641801466|ref|XP_005303368.2| | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TTC3 [Chrysemys picta bellii] | 0.0 |
| habu1_s17097_g21884.t1 | gi|564243991|ref|XP_006278764.1| | PREDICTED: E3 ubiquitin-protein ligase TTC3 [Alligator mississippiensis] | 0.0 |
| habu1_s17097_g21884.t1 | gi|557296155|ref|XP_006030449.1| | PREDICTED: E3 ubiquitin-protein ligase TTC3 [Alligator sinensis] | 0.0 |
| habu1_s17097_g21884.t1 | gi|705686409|ref|XP_010120617.1| | PREDICTED: E3 ubiquitin-protein ligase TTC3 [Chlamydotis macqueenii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.6 |
| Venom grand-1 | 9.5 |
| Pit, infrared sensing | 8.2 |
| Nose | 7.9 |
| Brain-1 | 6.6 |
| Eye | 7.8 |
| fetal fibroblast | 16.1 |
| venom gland-2 | 19.8 |
| Brain-2 | 5.9 |
| Spleen | 8.2 |
| Lung | 5.2 |
| Liver | 28.1 |
| Kidney | 5.9 |
| Pancreas | 12.4 |
| Small intestine | 5.6 |
| Large intestine | 6.2 |
| Stomach | 6.3 |
| heart | 6.6 |
| ovary | 37.5 |
| cheek muscle | 5.5 |
Transcript
| Transcript ID | habu1_s17097_g21884.t1 |
|---|---|
| Definition | - |
>habu1_s17097_g21884.t1 atgatcggaaatacaaaaactagagaaaacatagatcatttatcagtttttacagcagaagtaagtgaaaatccacaaaa gcaaagaagccaaatggatgattctgaaaagatgaaagaacaactgaatttgaaaactgattctaaaaaagttgtagata aatataactttcattgtggaaatgtgcaacagggggatgtaatactttcattagaaatgttgaagacatatatgaaaaat ggatccacatctttaatggatcaatgttttcacagtgctgaacaatcatttgtgctaactttaaatatgctggatccgtc tcaactacagaatctgaaccttgctcttgttgattatgttgtgatcatgtatggatatgccaatgctctccttggaatag ggcagcctgaggaactaagcaaagccaaatttcattttgataaaataattgagcaatatcagaaagtgagattcaactgc ttggcacattatggaattggaaaagtatatttgagacaaaatagattttctgaggctctagaccaattcatgaaatcaaa aactatggttaatcttaagattgtacctggagtactgacatggcctacaacttcagtagttatcaaagaaacaagatcag aaacattacaagctgtattggaagattgtattacagaatgcaagtttcccccaaaaccagatgcagtatgtcgttaccag caatgccaagcacacaaagtcaaaatatattttaatgacccggatttcaagggttttatacgtattgcctgctgtaaacg gtgtatagtagaatttcatttaagctgctggaaaaaaatgaaagctacaagatactatgataaaaatgataaggatattc ttcaagagatgtgtttcactccagattgttgtggtcttatttctaaaatcactgtcttcagttcttctggtattgtgaaa tgtgaatttgaacataaaataataaccaagaatcctccaaggcctgttctaaagcagaaatgctcaagttttaggaaatt acaagtaaaacaggagaaaaaactaagaagaaaatttataaaagaagcagtctccttcagaaatcttcacagaagtaaca ttgtggcaaaagatgatagctttaaaggaaatactccaaataatttttttgttgaggatacagtcctgcaacttattgga cggtatacagtgaatatacaagatggtatacgtgatgtcttcaaacttctgattgaattgctatcttggtgggtacttag tgaagaggattatgcactcttttcaacaagttgtctaccgtcggctgaaataatggaccagctcataagctttttaattg ctaaaaatgatagagtgaagacaagaatttttgtacatgttgtaagtgaacttgaagaagtggatcctaagctacatgac tggatgaaacatcttgacaataatggtttaaaagctactgaattttttctctcggaatatataactctcattctacagat tgattttaattcagtagcagttctctggaatgagaaatatggtattaaactcagcagaacattcacctgcttatctgaag atacacatgaaataataaaatacatagaagagttgtcacttacggaagttcgctgcttattgtggttattagaagaaaat agagagtgtttcccatttcttcatcaatgtttagatgactattttgataacctggataatccttttattgtgttaaggaa ggaatatactgaaactacttcaaataatgctatcaaagttaaaaacaaaaaccggaaaaagtcaaaagaatccaaggcta ttttagttgtatctggtggagttggtacagtaactcaagaagaagacaatatattttctgaagaatatacattaggtttt atgaatccacatgagccttttagaatcccagatgatcttcatgaacaagttatgatatttgaagcgttgtgtaatactgc ttcttctaacaacggttatgagagcattttggacaattacccagatccaacatgtgaaagtttatatgactatttttctc aaatcttggaagaacatggtcccatggaaattgataatccattattagttggggaatatgaagattttcccacagacact cgtaggatagtggagaatgctggtggtctaaaatcttttcttctcggatctctacgttttgttatggtggatgatcttat tggattgatgaaacatgcagttatgctgcaggaaaatgtagaacttgttgaaattgatgaaaacattaaaaatcaagaaa attattcagagagcctatactatcaagaaaacaatttccatagcaaatccagtttaaacccaactgctaaggaatttaag cctgtctcttttattaataagccttatattccaacatctacaaataatttagagtatgtgactactagccattcctcatt tagtccttttgcttcctcacattccttgtctagtcagacaactgacactggactggtggcaagtgtatctttgtctccaa ctgtatctgatgatcatacaatatttctgaatgagagattatctccagtttttcctcaagtgccatttattccagatatt tctgagcaaaccaattatatatatgcagattataatgcttatcttgatactgattcagaagaaccaacacatagcaagtg taatgttgataaatttaccacagctgatcaagtacatacatttcagaacattccttgcacagcaatgaaattggacattc acacttgcaaagataatcctggccagattgaggatcattgttgtaacgatgctgaatgcagttctgttaccaaaataaaa acagagaataaatctctagcaagaaacaatccccgttcaaggatgattgctatacaggtggatcaggaactaacagatgc tggagttaatactttacctcttcatccttatgaaagccaacaaggagatatgttacgtatggagaaagaacatcatgtac tacaaaaacaacttaaagaagcaactgaaaagtatgaacaacttaaatgtcgaagttccaaagacgccagtattttagag gaggagttatcactacttattgaaggaaataagctcagcaagagagaattggattggtttcatcaagatgcagaagtgaa ctttaaaaaatggcaacaagaaaaaaaagaaaaccaagaaggattaaaagcagcgaaaaataaagtcagaaagctagtag aaaccaatgaaacatatatgaaaagtattgatgagaaggataaacagtacaaagcatatttggatgaatttctggagata agtaataggtttgaatgtgaaaaagtaaaaatagaggaacttataaagaagacccaggattatcagcaagaatgtgttaa aagagcaatagcagccgaggtgtcagtacttgaaaactggaaagagaaagaattatataaattatgcagaaaatcaacaa atgccaaaggcaatcttaagtatctaaaattcatgaccagtcattctgcaatgccccagtcaaaattacagattgattct tgggagttatttatttccaatattggagaagaaaagaaaaaaatagagagtcagtttgaagagaggatttatatagtaaa aaatggtgctctcctaaatagtatcattccagtagaaaccgcagatcttcagccgcctactggtttgtcactggcaactc ctgagaagtctcctattaatgacccagccatcataatgtattcagctgctgttccgcacctgtttgctccattttcaaat gttaatgacaattactccttaccttccaaagttaaaactcacactggcaataaagatccagagcctccttcagatgaaga cattggagaactgccttctgaatgcagacaaagctcactttctgatcaagtatgcttgcctcaatcactaggaaattcag gaagtcactttctacacaccattctagaggaaccagcaggagctgcagaattcgacaatgctacaattctaaacaagcca attctcggaaagctatctgaaaatatcattaaccaacttagaattatatttccataccatacgagttcagatttagaaaa ttttataaaagaagtcaatatcaagaacagaaacaagttgagcacagatgcatacctaaacagggtaactgaatttatct tggatcatccaaacacaaaaaaggttctttcctcttctggacaaaatgaaaagttatcctcttgtacttctggaaaaaat ggaagtcatactcaaaaagtattaaacacattggtacaaagcaaaccaaagtctaaagctactaatgaaaagaaaaataa aactaactttccacctcaatcaaatcagatgccatggaaaaaaatcggtgaaacttcaaaatcaaagtggaaaaaatcaa atgatgcccctgataatgatccatgtgtaatatgtcatgaagagctaacttcaaatctattgcatgttctggattgtgga catagatttcacaaactgtgtattggtccatggattaaggagcacagtacatgtccaacatgtcgacgtcacatactttt gcgagaagattatcctgagcttcctggacgaaacaaaaaaacttaaaataacgcaacatacagattagcaagaatgatat tcagattattttaaaatcatgataataaaattatatatgaattgtgttccagttatttccagaatattgtatattaaatt atccctttgtagcttgaggaaaatatatacatgatgctagttcctccatttccaatgagttaaggtacatgatgcaacat tatatatcctctattgttaatctgtgtctacactttgggcagaaatatgtaatttatatatctgtattagctatttttac tgtatcacagtagagcagttcaaaaagttaacaaaatatatctcagatgttgtctcattaaataaagaatattaataaaa ttgtagactacagatttgtctagtttttcttgcttgcttataaaacattagtcctttaccttggattggttattagtgag caatgttattcagtacatttggagcctgattctttttgattttcacagataacctctttaaaaagtaatctagttcacaa attgttttagaatataatcaataaactatgattttaagtcagtgttt |
|
Protein
| Protein ID | habu1_s17097_g21884.t1 |
|---|---|
| Definition | - |
>habu1_s17097_g21884.t1 MIGNTKTRENIDHLSVFTAEVSENPQKQRSQMDDSEKMKEQLNLKTDSKKVVDKYNFHCGNVQQGDVILSLEMLKTYMKN GSTSLMDQCFHSAEQSFVLTLNMLDPSQLQNLNLALVDYVVIMYGYANALLGIGQPEELSKAKFHFDKIIEQYQKVRFNC LAHYGIGKVYLRQNRFSEALDQFMKSKTMVNLKIVPGVLTWPTTSVVIKETRSETLQAVLEDCITECKFPPKPDAVCRYQ QCQAHKVKIYFNDPDFKGFIRIACCKRCIVEFHLSCWKKMKATRYYDKNDKDILQEMCFTPDCCGLISKITVFSSSGIVK CEFEHKIITKNPPRPVLKQKCSSFRKLQVKQEKKLRRKFIKEAVSFRNLHRSNIVAKDDSFKGNTPNNFFVEDTVLQLIG RYTVNIQDGIRDVFKLLIELLSWWVLSEEDYALFSTSCLPSAEIMDQLISFLIAKNDRVKTRIFVHVVSELEEVDPKLHD WMKHLDNNGLKATEFFLSEYITLILQIDFNSVAVLWNEKYGIKLSRTFTCLSEDTHEIIKYIEELSLTEVRCLLWLLEEN RECFPFLHQCLDDYFDNLDNPFIVLRKEYTETTSNNAIKVKNKNRKKSKESKAILVVSGGVGTVTQEEDNIFSEEYTLGF MNPHEPFRIPDDLHEQVMIFEALCNTASSNNGYESILDNYPDPTCESLYDYFSQILEEHGPMEIDNPLLVGEYEDFPTDT RRIVENAGGLKSFLLGSLRFVMVDDLIGLMKHAVMLQENVELVEIDENIKNQENYSESLYYQENNFHSKSSLNPTAKEFK PVSFINKPYIPTSTNNLEYVTTSHSSFSPFASSHSLSSQTTDTGLVASVSLSPTVSDDHTIFLNERLSPVFPQVPFIPDI SEQTNYIYADYNAYLDTDSEEPTHSKCNVDKFTTADQVHTFQNIPCTAMKLDIHTCKDNPGQIEDHCCNDAECSSVTKIK TENKSLARNNPRSRMIAIQVDQELTDAGVNTLPLHPYESQQGDMLRMEKEHHVLQKQLKEATEKYEQLKCRSSKDASILE EELSLLIEGNKLSKRELDWFHQDAEVNFKKWQQEKKENQEGLKAAKNKVRKLVETNETYMKSIDEKDKQYKAYLDEFLEI SNRFECEKVKIEELIKKTQDYQQECVKRAIAAEVSVLENWKEKELYKLCRKSTNAKGNLKYLKFMTSHSAMPQSKLQIDS WELFISNIGEEKKKIESQFEERIYIVKNGALLNSIIPVETADLQPPTGLSLATPEKSPINDPAIIMYSAAVPHLFAPFSN VNDNYSLPSKVKTHTGNKDPEPPSDEDIGELPSECRQSSLSDQVCLPQSLGNSGSHFLHTILEEPAGAAEFDNATILNKP ILGKLSENIINQLRIIFPYHTSSDLENFIKEVNIKNRNKLSTDAYLNRVTEFILDHPNTKKVLSSSGQNEKLSSCTSGKN GSHTQKVLNTLVQSKPKSKATNEKKNKTNFPPQSNQMPWKKIGETSKSKWKKSNDAPDNDPCVICHEELTSNLLHVLDCG HRFHKLCIGPWIKEHSTCPTCRRHILLREDYPELPGRNKKT |
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