Gene
| Gene Model ID | habu1_s1713_g06358 |
|---|---|
| Locus | habu1_scaffold1713 : 153 ... 47488 : + |
| To GenomeBrowser | habu1_scaffold1713:153..47488 |
| Genes list of scaffold | habu1_scaffold1713 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: neurofibromin [Python bivittatus] | GO:0005622 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1713_g06358.t1 | 1 | 1 | RasGAP | 491 | 665 | 9.79508e-43 | 146.1 | 0.0 | 4.49957e-42 | 143.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1713_g06358.t1 | gi|602626980|ref|XP_007420441.1| | PREDICTED: neurofibromin [Python bivittatus] | 0.0 |
| habu1_s1713_g06358.t1 | gi|363741223|ref|XP_003642464.1| | PREDICTED: neurofibromin isoformX1 [Gallus gallus] | 0.0 |
| habu1_s1713_g06358.t1 | gi|513216736|ref|XP_004946844.1| | PREDICTED: neurofibromin isoform X5 [Gallus gallus] | 0.0 |
| habu1_s1713_g06358.t1 | gi|641790941|ref|XP_008177078.1| | PREDICTED: neurofibromin isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s1713_g06358.t1 | gi|591365596|ref|XP_007057664.1| | PREDICTED: neurofibromin [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.2 |
| Brain-1 | 3.7 |
| Eye | 1.1 |
| fetal fibroblast | 2.8 |
| venom gland-2 | 1.9 |
| Brain-2 | 3.2 |
| Spleen | 1.4 |
| Lung | 0.0 |
| Liver | 0.3 |
| Kidney | 1.6 |
| Pancreas | 1.2 |
| Small intestine | 1.4 |
| Large intestine | 0.9 |
| Stomach | 0.9 |
| heart | 1.3 |
| ovary | 0.4 |
| cheek muscle | 1.2 |
Transcript
| Transcript ID | habu1_s1713_g06358.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06358.t1 gaagaacggctcttcagaagagagtgatggccctgctcaggcgtattgaacatccaacagcaggtaacacggaggcttgg gaagatacacattttaaatgggaggcggctacaaaattgatcctcaactatccaaagactaagatggaagatggccaggt tgctgaaagccttcacaagacaatcgtcaagaggcggatgtcccatgtcagcggtggaggctccatagacctgtccgaca cagactctttgcaagagtggatcaacatgaccggctttctgtgcgccctgggcggagtgtgcttgcagcatcgcggcaac accccctttccatcctacagtccccccatgggccctgtgagcgagcggaaaggctccatgatctccatgctgtcgacgga cggcaacaccgagactcctgtcagcaagttcatggatcgcttgttgtccctgatggtctgcacccacgagaaagtgggtc tgcagatacggaccaacattaaggacctcgtcggcctggagctgagccctgccctctacccaacgcttttcaacaaatta aagaatatcatcagcaagttcttcgactcgcaagggcaggtcttgttaaatgataccaatacccagtttgtggagcagac catcgcgatcatgaagaacctgcttgataaccacaccgaaggcagctcggaacaccttgggcaagccaggattgagacca tgatgctgaatctagttaggcaactagtggcagaaaataggaacaagatggtggaatacttgaccgactgggttatggga acatccaaccaggctacagatgaggatgtgaaatgtctgacaagagacttggaccaggcaagcatggaagctgttgtctc tcttctggccgggcttccacttcaaccagaagaaggagatggagttgaattgatggaagctaaatcccaactattcctca agtacttcaccctgtttatgaacctccttaatgactgcagtgaagtggaagacgagagtgcacaaacaggcggccggaag cgtgggatgtctcgaagattggcttccttgcggcactgcaccgttctggctatgtcaaacttgctcaacgcgaacgtgga tagcggccttatgcactctataggtaaaatggacgagcttctcctttatattgtggacttcggaaatgcaaaactgtacc taaactcttatctttcattgttggtagggttaggatatcacaaagacctccagacaagagctacatttatggaggtcctc accaaaattctgcaacagggcactgagtttgacaccctggcggaaacggtgctggcagatcggtttgaaagattggtgga gttggtcaccatgatgggtgaccaaggagaattgcccattgctatggccttggcaaatgtggtgccttgttcccagtggg atgaactagctcgtgtcctcgtcaccctttttgactccaggcacttgctttaccagctgctctggaacatgttttctaaa gaagtggagctggctgactccatgcagactcttttcaggggaaatagtctggctagcaaaataatgactttctgctttaa ggtgtacggtgcaacctatctacagaagcttttggagcctttattaagaactgtaattacatccccagaatggcagcctg tgagcttcgaagtggaccctacaaggttggaatccagtgaaagcctggatagtaaccagcggagccttcttcagatgacc gagaagttcttccatgccatcatcaactcttccaccgagttcccacctcagcttcggagcgtttgccactgtctctatca ggtcgtcagccaacggtttcctcagaatagcattggagcagttgggagcgccatgttcttgagattcattaatccagcta ttgtgtccccatatgaggctggcatactggataagaagcctccaccaagaatcgaaaggggtctgaagttaatgtcaaag gtacttcagagcatcgctaaccatgtcttgtttacaaaggaggaacacatgcggccttttaacgactttgtgaaaagcaa ttttgatgctgcaagaaggtttttccttgacattgcctcagattgtccagctagtgatacagtcaatcacagcctctctt tcatcagtgatggcaacgtgcttgcactacatcgtttgctgtggaacaatcaagagaagattgggcagtacctttccagc aacagggaccacaaggctgttggaaggcgaccatttgacaagatggcaactttgcttgcatacctgggtcctcctgaaca caaaccagtggcagacacgcagtggtccagtataaacctcactagttccaagtttgaggaatttatgacaaggcaccaag tacacgagaaagaagaattcaaagccttgaaaaccctcaacattttttaccaagctgggacaacaaaagccggcaaccct gtcttctattacattgctcgccgttccttctggtctgttctgctgtctccaggcactgccatgtccactatccagatgtg gcagacatcatcatcatcatcatcataataataataataataatcatcatcatcatcatcatcatcatcatcatcatcat catcatcatcatcatatataaataaaaatgtaaatgttcgtttgttca |
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Protein
| Protein ID | habu1_s1713_g06358.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06358.t1 MALLRRIEHPTAGNTEAWEDTHFKWEAATKLILNYPKTKMEDGQVAESLHKTIVKRRMSHVSGGGSIDLSDTDSLQEWIN MTGFLCALGGVCLQHRGNTPFPSYSPPMGPVSERKGSMISMLSTDGNTETPVSKFMDRLLSLMVCTHEKVGLQIRTNIKD LVGLELSPALYPTLFNKLKNIISKFFDSQGQVLLNDTNTQFVEQTIAIMKNLLDNHTEGSSEHLGQARIETMMLNLVRQL VAENRNKMVEYLTDWVMGTSNQATDEDVKCLTRDLDQASMEAVVSLLAGLPLQPEEGDGVELMEAKSQLFLKYFTLFMNL LNDCSEVEDESAQTGGRKRGMSRRLASLRHCTVLAMSNLLNANVDSGLMHSIGKMDELLLYIVDFGNAKLYLNSYLSLLV GLGYHKDLQTRATFMEVLTKILQQGTEFDTLAETVLADRFERLVELVTMMGDQGELPIAMALANVVPCSQWDELARVLVT LFDSRHLLYQLLWNMFSKEVELADSMQTLFRGNSLASKIMTFCFKVYGATYLQKLLEPLLRTVITSPEWQPVSFEVDPTR LESSESLDSNQRSLLQMTEKFFHAIINSSTEFPPQLRSVCHCLYQVVSQRFPQNSIGAVGSAMFLRFINPAIVSPYEAGI LDKKPPPRIERGLKLMSKVLQSIANHVLFTKEEHMRPFNDFVKSNFDAARRFFLDIASDCPASDTVNHSLSFISDGNVLA LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTQWSSINLTSSKFEEFMTRHQVHEKEEFKA LKTLNIFYQAGTTKAGNPVFYYIARRSFWSVLLSPGTAMSTIQMWQTSSSSSS |
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