Gene
| Gene Model ID | habu1_s1713_g06360 |
|---|---|
| Locus | habu1_scaffold1713 : 89656 ... 167788 : + |
| To GenomeBrowser | habu1_scaffold1713:89656..167788 |
| Genes list of scaffold | habu1_scaffold1713 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1713_g06360.t2 | 1 | 1 | CRAL_TRIO_2 | 102 | 213 | 1.7e-15 | 57.2 | 6.1e-19 | 4.5e-15 | 55.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1713_g06360.t2 | gi|704191204|ref|XP_010138989.1| | PREDICTED: neurofibromin, partial [Buceros rhinoceros silvestris] | 0.0 |
| habu1_s1713_g06360.t2 | gi|701308137|ref|XP_010014931.1| | PREDICTED: neurofibromin, partial [Nestor notabilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 1.3 |
| Nose | 0.8 |
| Brain-1 | 4.5 |
| Eye | 1.9 |
| fetal fibroblast | 4.2 |
| venom gland-2 | 1.9 |
| Brain-2 | 4.5 |
| Spleen | 2.8 |
| Lung | 1.1 |
| Liver | 1.0 |
| Kidney | 2.2 |
| Pancreas | 2.4 |
| Small intestine | 2.8 |
| Large intestine | 1.9 |
| Stomach | 1.2 |
| heart | 2.6 |
| ovary | 0.5 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s1713_g06360.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06360.t1 atgacttagtgactgaacaaattcttgttacttagctagtgcgatggcttgaatgctgcaagcttccctaaagtagaggt aggtaagatagcagctgcaggaatgggtgctcagatgttcccgttggttaataatgatgatgatgatgatgatgatgatg atgatgatgatgatgatgatgatgatgatgatgataaaagtttggctttagttggatcctcatctacagttgagagttca ggatctgtattagcgagagcagaggaagaagacagcccctctgttggaaacgttgaagataattgtagggctgtagaggt gggcgtgtctgttagttgcttggatctaacagtggcaatagatttggaagtgaaagtctgtgttgcgtttaagaccggcc aaatcaatggggacctgctgatatatcatgttttgctgacactgaagccttactacgccaagccatacgagatcgtagtg gacctcacccacgctgggcccagcaaccgtttcaaaacagacttcctgtccaagtggtttgtagttttcccaggattcgc ttacgaaaacgtctctgccgtcttcatctacaactgcaactcatgggtgagggagtacaccaagtaccacgagcggctcc tgacgggcctgaaaggcagcaaaaggcttgttttcattgactcgcctgggaaattggccgagcacatagaccacgagcag cagaaacttcctgcggctactttggctttggaagaagacctgaaagttttccacaatgccctcaaactggctcacaaaga caccaaagtttccattaaagttggctccacggctgtccaggtgacgtcagctgagcgcacaagagtcctgggccagaccg tgttcctgaacgacatttactacgcttctgaaatagaagaaatctgccttgtggatgaaaaccagttcaccttaaccatt gccaaccagggcacccctctgactttcatgcaccaggagtgcgaagctattgtacagtctatcattcatatacggacacg atgggagttatcccagcccgactctataccgcaacatacgaaaatccgtcccaaggatgtgcccggaaccctgctgaaca ttgcgctgcttaatctagggagctcagacccaagtctacggtctgcggcctataatcttctctgtgccttaacttgtact tttaatttaaagattgaaggccaattactggaaacgtcaggtctttgtatccctgcaaacaacactcttttcattgtctc cattagtaagactctggcagctaacgagccccaccttaccctagagtttttggaagaatgcatttctggatttagcaagt ctagtattgaactaaaacatctctgcctggaatatatgactccctggttattgaatctggtccgcttttgcaaacataat gatgatgctcggcgccagcgagtcacagcgattcttgataagcttatcacaatgacaataaatgagaaacagatgtatcc ttccattcaagccaagatatggggtagtttgggacagataactgatctacttgatgtggtgttggacagttttatcaaaa ccagtgccacaggaggattggggtccatcaaagcagaggtcatggcagatacagctgttgccctggcttctggaaacgtg aagctggtttccagcaaagtgattggacggatgtgcaaaataatcgacaagacctgcctctctccaactgccacgttaga gcagcacctcatgtgggacgacattgccattctggcccgttacatgctgatgctgtcttttaacaattccctcgatgtgg ccgcacacctcccctacctcttccacgttgttactctgttggtggctaccggccctctttctctcagagcttccacccac ggcctggtcatcaacatcattcattctctgtgcacttgttcacaacttcactttagtgaggaaacgaagcaggttttgag gctaagtttaacggagttctcattgcccaaattctacttgctgtttggaattagcaaagtgaaatctgcagcggtcattg cattccgatccagctatcgggaccggtcattctctcctggctcctatgagagagaaacatttgcactgacatctctggaa acagtcacagaagcattgctggaaattatggagggtctggagagctgcttgaaagggccagacaactacaacagccaagt tctgatagaggccaccgtcatagccctgactaagctccagccgctcctcaacaaggattcacctctgcacaaggtgctgt tttgggtggccatggcagttctacagctggatgaggtcaatctgtattccgcaggcacagctttacttgagcagaacctt cacactttggacaacctccgggtatttaatgataaaagccctgaggaagtcttcatggagatcaggaggcctctggagtg gcactgtaagcagatggaccactttgtgggactcaatttcaactccaacttcaactttgcacttgtgggacatctgctaa aaggttaccggcatccctcaccgaccatagtagcaagaacagtaaggattctgcacacactccttgctctggttaacaaa cataggaactgtgataagtttgaggtgaatacccagagtgtggcttaccttgcagctctgctgactatgtccgaggaagt caggagccggtgcagcttaaagcataggaaatcgctcctcttgacagatatttcaatggaaaacgttcctatggagacat accccatacaccacaatgaagccagttgtaggacactaagagaaaaccagccctggtcttctcccaagaactctgacaga catctcgctgctagttacccaactgttgggcagatcagtccccgcacaaggaaatccatgagcctggatatgggacagcc ttctcaagccaacactaaaaagctgctaggtattcctcgacttacgaccacaattggggccgggatttccgtcgacgctg caaccagtcataaacgcgagccagttgccaggcgctcaaattgcgatcacgtgattgtgaggtggtgcgacggtcataag ttgcaagttcaggtcaatgagatcgctttttccaaggccattggaacattgaaccgttgtaaaatgaacaattgtacccg aaaaagttttgaccacttagtatcggacacaaaagcccctaaaagacaagaaatggaatccgggatcaccacgcctccaa aaatgagaagagtagcagaaaatgattatgaaatggaaacacaaaggatatcaccccaacagcatccccatctccgtaaa gtatctgtgtccgagtctaacgtcctcctggatgaggaagtcctcactgatcccaaaatccaagctttgctgctgaccgt ccttgcaacgttggtaaagtacacagcagatgagtttgaccagcgaatcctgtatgagtatttagcagaagccagtgtgg ttttcccaaaagtctttcctgtggtgcacaatttattggacttcaagataaatactctcttatcgcaatgtcaggatcca aatttattgaatcccattcatgggattgttcagagtgtggtttaccacgaagaatctccaccacagtaccagacgtctta tctgcagagttttggatttaacggcttgtggaggtttgcaggaccattttctaagcaaagtcaaatacccgactacgctg agctgattgtgaagttccttgacgccttgatcgacacctacttgcctggaatggatgaggagatcagtgaagaatccctt ctaaccccaacctctccttaccctcctgcagtgcagagtcagctcagtatcactgcaaacctgaacctttccaattccat gacctcacttgcaacttcccagcattccccaggaatcgacaaagagaacgtggaactttctccaacggccgcacactcca acagcggaaggactcgccatggctcagctagccaagtgcagaagcaacggagcaccggcagtttcaaacgccacaacatt aagaagatggtgtgaagctttttctttctttctttctttctttctttctttctttctttctttctttctttctttctttc tttctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctgcccgacacacagt gctgggcaattaacttttgaaacagtccttgtacatttatttttggattttcacttcgatttcatacagctgcctttttt ttttttttaaagacttgctcctcccctgatcattttcaaaatagtgatttcaaagctgatgagtggaactatacgaggaa ctggaaaaaaaaataatgaattataggcagaagggatggtaattgtatccgaagcttcacagaaattatgggcatcttac tttggataggttcccttttttatttttgtttttgttttttgtaattcgagggcttattttgatgttttttgtgtcgtttt gttttttacagcttattttgtgtctactttttttttaaaagtgttaatattcagtcttgtttgcacactagtgagatttg ggggggggcaataaatgtgcatagcgtagcgtcctct |
|
| Transcript ID | habu1_s1713_g06360.t2 |
| Definition | - |
>habu1_s1713_g06360.t2 atgacttagtgactgaacaaattcttgttacttagctagtgcgatggcttgaatgctgcaagcttccctaaagtagaggt aggtaagatagcagctgcaggaatgggtgctcagatgttcccgttggttaataatgatgatgatgatgatgatgatgatg atgatgatgatgatgatgatgatgatgatgatgataaaagtttggctttagttggatcctcatctacagttgagagttca ggatctgtattagcgagagcagaggaagaagacagcccctctgttggaaacgttgaagataattgtagggctgtagaggt gggcgtgtctgttagttgcttggatctaacagtggcaatagatttggaagtgaaagtctgtgttgcgtttaagaccggcc aaatcaatggggacctgctgatatatcatgttttgctgacactgaagccttactacgccaagccatacgagatcgtagtg gacctcacccacgctgggcccagcaaccgtttcaaaacagacttcctgtccaagtggtttgtagttttcccaggattcgc ttacgaaaacgtctctgccgtcttcatctacaactgcaactcatgggtgagggagtacaccaagtaccacgagcggctcc tgacgggcctgaaaggcagcaaaaggcttgttttcattgactcgcctgggaaattggccgagcacatagaccacgagcag cagaaacttcctgcggctactttggctttggaagaagacctgaaagttttccacaatgccctcaaactggctcacaaaga caccaaagtttccattaaagttggctccacggctgtccaggtgacgtcagctgagcgcacaagagtcctgggccagaccg tgttcctgaacgacatttactacgcttctgaaatagaagaaatctgccttgtggatgaaaaccagttcaccttaaccatt gccaaccagggcacccctctgactttcatgcaccaggagtgcgaagctattgtacagtctatcattcatatacggacacg atgggagttatcccagcccgactctataccgcaacatacgaaaatccgtcccaaggatgtgcccggaaccctgctgaaca ttgcgctgcttaatctagggagctcagacccaagtctacgtaagactctggcagctaacgagccccaccttaccctagag tttttggaagaatgcatttctggatttagcaagtctagtattgaactaaaacatctctgcctggaatatatgactccctg gttattgaatctggtccgcttttgcaaacataatgatgatgctcggcgccagcgagtcacagcgattcttgataagctta tcacaatgacaataaatgagaaacagatgtatccttccattcaagccaagatatggggtagtttgggacagataactgat ctacttgatgtggtgttggacagttttatcaaaaccagtgccacaggaggattggggtccatcaaagcagaggtcatggc agatacagctgttgccctggcttctggaaacgtgaagctggtttccagcaaagtgattggacggatgtgcaaaataatcg acaagacctgcctctctccaactgccacgttagagcagcacctcatgtgggacgacattgccattctggcccgttacatg ctgatgctgtcttttaacaattccctcgatgtggccgcacacctcccctacctcttccacgttgttactctgttggtggc taccggccctctttctctcagagcttccacccacggcctggtcatcaacatcattcattctctgtgcacttgttcacaac ttcactttagtgaggaaacgaagcaggttttgaggctaagtttaacggagttctcattgcccaaattctacttgctgttt ggaattagcaaagtgaaatctgcagcggtcattgcattccgatccagctatcgggaccggtcattctctcctggctccta tgagagagaaacatttgcactgacatctctggaaacagtcacagaagcattgctggaaattatggagggtctggagagct gcttgaaagggccagacaactacaacagccaagttctgatagaggccaccgtcatagccctgactaagctccagccgctc ctcaacaaggattcacctctgcacaaggtgctgttttgggtggccatggcagttctacagctggatgaggtcaatctgta ttccgcaggcacagctttacttgagcagaaccttcacactttggacaacctccgggtatttaatgataaaagccctgagg aagtcttcatggagatcaggaggcctctggagtggcactgtaagcagatggaccactttgtgggactcaatttcaactcc aacttcaactttgcacttgtgggacatctgctaaaaggttaccggcatccctcaccgaccatagtagcaagaacagtaag gattctgcacacactccttgctctggttaacaaacataggaactgtgataagtttgaggtgaatacccagagtgtggctt accttgcagctctgctgactatgtccgaggaagtcaggagccggtgcagcttaaagcataggaaatcgctcctcttgaca gatatttcaatggaaaacgttcctatggagacataccccatacaccacaatgaagccagttgtaggacactaagagaaaa ccagccctggtcttctcccaagaactctgacagacatctcgctgctagttacccaactgttgggcagatcagtccccgca caaggaaatccatgagcctggatatgggacagccttctcaagccaacactaaaaagctgctaggtattcctcgacttacg accacaattggggccgggatttccgtcgacgctgcaaccagtcataaacgcgagccagttgccaggcgctcaaattgcga tcacgtgattgtgaggtggtgcgacggtcataagttgcaagttcaggtcaatgagatcgctttttccaaggccattggaa cattgaaccgttgtaaaatgaacaattgtacccgaaaaagttttgaccacttagtatcggacacaaaagcccctaaaaga caagaaatggaatccgggatcaccacgcctccaaaaatgagaagagtagcagaaaatgattatgaaatggaaacacaaag gatatcaccccaacagcatccccatctccgtaaagtatctgtgtccgagtctaacgtcctcctggatgaggaagtcctca ctgatcccaaaatccaagctttgctgctgaccgtccttgcaacgttggtaaagtacacagcagatgagtttgaccagcga atcctgtatgagtatttagcagaagccagtgtggttttcccaaaagtctttcctgtggtgcacaatttattggacttcaa gataaatactctcttatcgcaatgtcaggatccaaatttattgaatcccattcatgggattgttcagagtgtggtttacc acgaagaatctccaccacagtaccagacgtcttatctgcagagttttggatttaacggcttgtggaggtttgcaggacca ttttctaagcaaagtcaaatacccgactacgctgagctgattgtgaagttccttgacgccttgatcgacacctacttgcc tggaatggatgaggagatcagtgaagaatcccttctaaccccaacctctccttaccctcctgcagtgcagagtcagctca gtatcactgcaaacctgaacctttccaattccatgacctcacttgcaacttcccagcattccccaggaatcgacaaagag aacgtggaactttctccaacggccgcacactccaacagcggaaggactcgccatggctcagctagccaagtgcagaagca acggagcaccggcagtttcaaacgccacaacattaagaagatggtgtgaagctttttctttctttctttctttctttctt tctttctttctttctttctttctttctttctttctttctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnccctgcccgacacacagtgctgggcaattaacttttgaaacagtccttgtacatttatttttgg attttcacttcgatttcatacagctgccttttttttttttttaaagacttgctcctcccctgatcattttcaaaatagtg atttcaaagctgatgagtggaactatacgaggaactggaaaaaaaaataatgaattataggcagaagggatggtaattgt atccgaagcttcacagaaattatgggcatcttactttggataggttcccttttttatttttgtttttgttttttgtaatt cgagggcttattttgatgttttttgtgtcgttttgttttttacagcttattttgtgtctactttttttttaaaagtgtta atattcagtcttgtttgcacactagtgagatttgggggggggcaataaatgtgcatagcgtagcgtcctct |
|
Protein
| Protein ID | habu1_s1713_g06360.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06360.t1 MGAQMFPLVNNDDDDDDDDDDDDDDDDDDDDKSLALVGSSSTVESSGSVLARAEEEDSPSVGNVEDNCRAVEVGVSVSCL DLTVAIDLEVKVCVAFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHAGPSNRFKTDFLSKWFVVFPGFAYENVSAV FIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDSPGKLAEHIDHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKV GSTAVQVTSAERTRVLGQTVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFMHQECEAIVQSIIHIRTRWELSQPD SIPQHTKIRPKDVPGTLLNIALLNLGSSDPSLRSAAYNLLCALTCTFNLKIEGQLLETSGLCIPANNTLFIVSISKTLAA NEPHLTLEFLEECISGFSKSSIELKHLCLEYMTPWLLNLVRFCKHNDDARRQRVTAILDKLITMTINEKQMYPSIQAKIW GSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTCLSPTATLEQHLMWDD IAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRASTHGLVINIIHSLCTCSQLHFSEETKQVLRLSLTEFS LPKFYLLFGISKVKSAAVIAFRSSYRDRSFSPGSYERETFALTSLETVTEALLEIMEGLESCLKGPDNYNSQVLIEATVI ALTKLQPLLNKDSPLHKVLFWVAMAVLQLDEVNLYSAGTALLEQNLHTLDNLRVFNDKSPEEVFMEIRRPLEWHCKQMDH FVGLNFNSNFNFALVGHLLKGYRHPSPTIVARTVRILHTLLALVNKHRNCDKFEVNTQSVAYLAALLTMSEEVRSRCSLK HRKSLLLTDISMENVPMETYPIHHNEASCRTLRENQPWSSPKNSDRHLAASYPTVGQISPRTRKSMSLDMGQPSQANTKK LLGIPRLTTTIGAGISVDAATSHKREPVARRSNCDHVIVRWCDGHKLQVQVNEIAFSKAIGTLNRCKMNNCTRKSFDHLV SDTKAPKRQEMESGITTPPKMRRVAENDYEMETQRISPQQHPHLRKVSVSESNVLLDEEVLTDPKIQALLLTVLATLVKY TADEFDQRILYEYLAEASVVFPKVFPVVHNLLDFKINTLLSQCQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSFGFN GLWRFAGPFSKQSQIPDYAELIVKFLDALIDTYLPGMDEEISEESLLTPTSPYPPAVQSQLSITANLNLSNSMTSLATSQ HSPGIDKENVELSPTAAHSNSGRTRHGSASQVQKQRSTGSFKRHNIKKMV |
|
| Protein ID | habu1_s1713_g06360.t2 |
| Definition | - |
>habu1_s1713_g06360.t2 MGAQMFPLVNNDDDDDDDDDDDDDDDDDDDDKSLALVGSSSTVESSGSVLARAEEEDSPSVGNVEDNCRAVEVGVSVSCL DLTVAIDLEVKVCVAFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHAGPSNRFKTDFLSKWFVVFPGFAYENVSAV FIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDSPGKLAEHIDHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKV GSTAVQVTSAERTRVLGQTVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFMHQECEAIVQSIIHIRTRWELSQPD SIPQHTKIRPKDVPGTLLNIALLNLGSSDPSLRKTLAANEPHLTLEFLEECISGFSKSSIELKHLCLEYMTPWLLNLVRF CKHNDDARRQRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALA SGNVKLVSSKVIGRMCKIIDKTCLSPTATLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLR ASTHGLVINIIHSLCTCSQLHFSEETKQVLRLSLTEFSLPKFYLLFGISKVKSAAVIAFRSSYRDRSFSPGSYERETFAL TSLETVTEALLEIMEGLESCLKGPDNYNSQVLIEATVIALTKLQPLLNKDSPLHKVLFWVAMAVLQLDEVNLYSAGTALL EQNLHTLDNLRVFNDKSPEEVFMEIRRPLEWHCKQMDHFVGLNFNSNFNFALVGHLLKGYRHPSPTIVARTVRILHTLLA LVNKHRNCDKFEVNTQSVAYLAALLTMSEEVRSRCSLKHRKSLLLTDISMENVPMETYPIHHNEASCRTLRENQPWSSPK NSDRHLAASYPTVGQISPRTRKSMSLDMGQPSQANTKKLLGIPRLTTTIGAGISVDAATSHKREPVARRSNCDHVIVRWC DGHKLQVQVNEIAFSKAIGTLNRCKMNNCTRKSFDHLVSDTKAPKRQEMESGITTPPKMRRVAENDYEMETQRISPQQHP HLRKVSVSESNVLLDEEVLTDPKIQALLLTVLATLVKYTADEFDQRILYEYLAEASVVFPKVFPVVHNLLDFKINTLLSQ CQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSFGFNGLWRFAGPFSKQSQIPDYAELIVKFLDALIDTYLPGMDEEIS EESLLTPTSPYPPAVQSQLSITANLNLSNSMTSLATSQHSPGIDKENVELSPTAAHSNSGRTRHGSASQVQKQRSTGSFK RHNIKKMV |
|