Gene
| Gene Model ID | habu1_s1713_g06363 |
|---|---|
| Locus | habu1_scaffold1713 : 294036 ... 333809 : + |
| To GenomeBrowser | habu1_scaffold1713:294036..333809 |
| Genes list of scaffold | habu1_scaffold1713 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1713_g06363.t1 | 1 | 1 | RRM_1 | 71 | 101 | 4.8e-07 | 29.3 | 1.5e-10 | 7.5e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1713_g06363.t1 | gi|602626991|ref|XP_007420446.1| | PREDICTED: RNA-binding protein Musashi homolog 2-like, partial [Python bivittatus] | 9.0e-12 |
| habu1_s1713_g06363.t1 | gi|657743344|ref|XP_008306820.1| | PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 2-like [Cynoglossus semilaevis] | 9.0e-11 |
| habu1_s1713_g06363.t1 | gi|512930642|ref|XP_004906723.1| | 1.0e-10 | |
| habu1_s1713_g06363.t1 | gi|585155126|ref|XP_006729905.1| | PREDICTED: RNA-binding protein Musashi homolog 2 [Leptonychotes weddellii] | 2.0e-10 |
| habu1_s1713_g06363.t1 | gi|685597509|ref|XP_009188587.1| | PREDICTED: RNA-binding protein Musashi homolog 2 isoform X1 [Papio anubis] | 2.0e-10 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.2 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1713_g06363.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06363.t1 cggtcataagttgaggactttccctgcccgggagcgccgcacatgcgtggttccgccccctgcgccggccgaggcgtagc tgacaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggagaaagtcaaaaaaggtgatcacatga ccctgggactctgcaactgccataaatgtgagtcagttgccaagcatccaaattttgatcacgtgaccacagggatgctg caacagttgtacaataatcttagagattattttagcaaatttggagacattagagaatgtatggtcatgcgggacccaac tacaaaacgctccagaaaatatgcaaatgatcttgctttccatttctcccccctccaccaccccccatcccgcagattga ccccaaagttgcatttccccgaagagctcaacctaagctttccacgcaaacgttgcccgaccttttgaatctgcagggtt cccatgctaatttatactgactttttttttttccatggagttatttatggttgctttctgcctgggtaagaggaaggagt ataatagtacaagcacaaattgcccaagtgtcaaaatgggatagaaagggaccgctcccccccctcccccagaatgtttc tcaaaaactggaaccggtataaaagtttgatctggaaaggaataaggtagagatttttgaactcattagctgccttacgt ccacctccgaatgtgggattttaaaggggaaaaaattactgccatttcctctacttttttattgagggggggaagtttgt atgatttatgtattcaaagtgttttctaagaaaatctgcttatcatcttagacagagttacaatacaataaaacccaagg taacaccacattaaaacaatttaagtattaaaacagt |
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Protein
| Protein ID | habu1_s1713_g06363.t1 |
|---|---|
| Definition | - |
>habu1_s1713_g06363.t1 MRGSAPCAGRGVADKRQRRSRPTTSWPSSREKVKKGDHMTLGLCNCHKCESVAKHPNFDHVTTGMLQQLYNNLRDYFSKF GDIRECMVMRDPTTKRSRKYANDLAFHFSPLHHPPSRRLTPKLHFPEELNLSFPRKRCPTF |
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