Gene
| Gene Model ID | habu1_s17528_g21945 |
|---|---|
| Locus | habu1_scaffold17528 : 1 ... 64010 : + |
| To GenomeBrowser | habu1_scaffold17528:1..64010 |
| Genes list of scaffold | habu1_scaffold17528 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| smoothened homolog | GO:0001503 GO:0002064 GO:0003007 GO:0005488 GO:0005929 GO:0006357 GO:0007224 GO:0007267 GO:0007368 GO:0009953 GO:0010628 GO:0010629 GO:0016477 GO:0030900 GO:0031016 GO:0034504 GO:0040007 GO:0043231 GO:0045596 GO:0048565 GO:0048568 GO:0048699 GO:0048864 GO:0051962 GO:0060284 GO:0060485 GO:0060562 GO:0065009 GO:0072088 GO:0098590 GO:2000027 GO:2000179 GO:2000648 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17528_g21945.t2 | 1 | 1 | Frizzled | 2 | 247 | 0.0 | 294.4 | 0.0 | 0.0 | 293.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.9 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 6.8 |
| Nose | 2.6 |
| Brain-1 | 1.9 |
| Eye | 3.0 |
| fetal fibroblast | 14.6 |
| venom gland-2 | 1.3 |
| Brain-2 | 1.9 |
| Spleen | 4.0 |
| Lung | 4.5 |
| Liver | 3.1 |
| Kidney | 1.6 |
| Pancreas | 1.4 |
| Small intestine | 1.1 |
| Large intestine | 2.4 |
| Stomach | 5.5 |
| heart | 4.4 |
| ovary | 0.9 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s17528_g21945.t1 |
|---|---|
| Definition | - |
>habu1_s17528_g21945.t1 ctccaacgagaccctttcctgcgtgatcatctttgtgattgtctactactccctgatgtcgggcgtgatctggttcgtca tgctgacgtacgcctggcacacctccttcaaggcgctggggaccacctaccagccgctggcaggaaagacctcctacttc cacctggtgacctggtccgtccccttcgttctcacggtggccatcttggcggtggcccaggtggacggagattcggttag tggcatctgctttgtggggtacaaaaactaccactaccgtgcggggtttgtcctggcccccatcggcctggtgttaatta tcgggggctacttcctgatcaaaggagtgatgacgctcttctccatcaaaagcaaccatccaggtctccttagtgagaaa gcggccagcaagatcaacgagaccatgttacgcctcgggatcttcggcttcttggcctttggctttgtcttcatcacctt cggctgccatttctacgacttcttcaaccaggcggagtgggaacgcagcttccgggaatacgtgctgtgcgaggccaacg tgaccatcgccacgcagaccaagaagccgattccggattgtgggatcaagaaccgtcccagccttctggtggagaagatc aacctcttcgccatgtttgggacgggcatctccatgagcacctgggtttggaccaaggccaccctgctcatctggaagcg cacctggggcaggctgaccggccagagcggcaacgagccgaagcggctgaagaagagcaggatgatcgccaaggccttct cccggcggaaggagctgcagcagaacccccagcaggagctctccttcagcctgcgcaccgtctcgcacgaggggccggtc gtgccccccgaggagagggccagtcattggctgatggaaggcgagttttcctccaggcgggccaagaaatcgacccggaa gaagaagaagcacaggaagaagaagggggtcaacccctccgggccggcagccgagacttgcaccccgaattacttcgccc cgggggtccccagctccgtcccacacctgccccggctccccaaggccaagtgcttcgtggccagcccagagcaagcccag gctttggacgacgtccttttgcctcgagcggcccccgactggagaccccggcacccccagcagccggaccaccctctggg ccgacggccccccggcagctgcaggcgcgacaacccaccagatctcatcaaccaccccttttgtcccgatctcgggggtc ccgaggaaaccggaccggaacgtggaacgtggctggtccccggacggcagccctcgcattttcggggggctgccttcccc gctgcccccaggagctcagctgctttgttcctgggcagtgatgcctatggggtgcagccgcctctgggcagttgggtcat gaaacgtctgcaagataaccaggctgggagaccacccgggacccctcagatcctcctcgtctccacggcttcccagctca ccgcctcaaatggcccccgtaagaactttgctcggaaggagatccggaactggggggggtcaacagaaggaggcttggca acagacagagttctgcgacgcggccctaaccctggtttgataaaacacagttccttcttccgcagaagatactgtgccca aaccaagattcaggcaatcctcgacttcaccaccacaattctgcccaaaatttctgttggcaatctgggtcagtgttgct caacctttaagatccagtttgctgaccaaaagcaagaattcaacaagcgccccacgaagatcggccgccgttcgctctcc cgctccatctctcagtcgtccacagacagttacagctccggtcgagtcggcacggagccctccgagaagagagcgcctct cccccggtgccgcgtcgggggtcctgctgcacggaaaggaagggccgcccccctcgatcggatggacaccccgagaatct tctccattgacaccgtgcacgacgagatcccggccgtggctcagctctcttttcgttcccaagaaaggaagccgagccgg gttctctgccgacgggtgggaagcg |
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| Transcript ID | habu1_s17528_g21945.t2 |
| Definition | - |
>habu1_s17528_g21945.t2 ctccaacgagaccctttcctgcgtgatcatctttgtgattgtctactactccctgatgtcgggcgtgatctggttcgtca tgctgacgtacgcctggcacacctccttcaaggcgctggggaccacctaccagccgctggcaggaaagacctcctacttc cacctggtgacctggtccgtccccttcgttctcacggtggccatcttggcggtggcccaggtggacggagattcggttag tggcatctgctttgtggggtacaaaaactaccactaccgtgcggggtttgtcctggcccccatcggcctggtgttaatta tcgggggctacttcctgatcaaaggagtgatgacgctcttctccatcaaaagcaaccatccaggtctccttagtgagaaa gcggccagcaagatcaacgagaccatgttacgcctcgggatcttcggcttcttggcctttggctttgtcttcatcacctt cggctgccatttctacgacttcttcaaccaggcggagtgggaacgcagcttccgggaatacgtgctgtgcgaggccaacg tgaccatcgccacgcagaccaagaagccgattccggattgtgggatcaagaaccgtcccagccttctggtggagaagatc aacctcttcgccatgtttgggacgggcatctccatgagcacctgggtttggaccaaggccaccctgctcatctggaagcg cacctggggcaggctgaccggccagagcggcaacgagccgaagcggctgaagaagagcaggatgatcgccaaggccttct cccggcggaaggagctgcagcagaacccccagcaggagctctccttcagcctgcgcaccgtctcgcacgaggggccggtc gtgccccccgaggagagggccagtcattggctgatggaaggcgagttttcctccaggcgggccaagaaatcgacccggaa gaagaagaagcacaggaagaagaagggggtcaacccctccgggccggcagccgagacttgcaccccgaattacttcgccc cgggggtccccagctccgtcccacacctgccccggctccccaaggccaagtgcttcgtggccagcccagagcaagcccag gctttggacgacgtccttttgcctcgagcggcccccgactggagaccccggcacccccagcagccggaccaccctctggg ccgacggccccccggcagctgcaggcgcgacaacccaccagatctcatcaaccaccccttttgtcccgatctcgggggtc ccgaggaaaccggaccggaacgtggaacgtggctggtccccggacggcagccctcgcattttcggggggctgccttcccc gctgcccccaggagctcagctgctttgttcctgggcagtgatgcctatggggtgcagccgcctctgggcagttgggtcat gaaacgtctgcaagataaccaggctgggagaccacccgggacccctcagatcctcctcgtctccacggcttcccagctca ccgcctcaaatggcccccgtaagaactttgctcggaaggagatccggaactggggggggtcaacagaaggaggcttggca acagacagagttctgcgacgcggccctaaccctggtttgataaaacacagttccttcttccgcagaagatactgtgccca aaccaagattcaggcaatcctcgacttcaccaccacaattctgcccaaaatttctgttggacttgtggagttcacgctgg ccgaggaattctgggagttgaagtccacaagtcctaaaaggaccaagtttgaagacccctggcctaggccagggcttttc aaccagtggtacgggtaccacctgtggtacattggcacctggcaggtgagccaaaccgtagcctccttagaaagacgccg tgtttgtaaagttgctgggatggaggagctggaggagaccgaaaggacctccgctttccacttgccagactggatgatcc agtttgctgaccaaaagcaagaattcaacaagcgccccacgaagatcggccgccgttcgctctcccgctccatctctcag tcgtccacagacagttacagctccggtcgagtcggcacggagccctccgagaagagagcgcctctcccccggtgccgcgt cgggggtcctgctgcacggaaaggaagggccgcccccctcgatcggatggacaccccgagaatcttctccattgacaccg tgcacgacgagatcccggccgtggctcagctctcttttcgttcccaagaaaggaagccgagccgggttctctgccgacgg gtgggaagcg |
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Protein
| Protein ID | habu1_s17528_g21945.t1 |
|---|---|
| Definition | - |
>habu1_s17528_g21945.t1 SNETLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTYQPLAGKTSYFHLVTWSVPFVLTVAILAVAQVDGDSVS GICFVGYKNYHYRAGFVLAPIGLVLIIGGYFLIKGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITF GCHFYDFFNQAEWERSFREYVLCEANVTIATQTKKPIPDCGIKNRPSLLVEKINLFAMFGTGISMSTWVWTKATLLIWKR TWGRLTGQSGNEPKRLKKSRMIAKAFSRRKELQQNPQQELSFSLRTVSHEGPVVPPEERASHWLMEGEFSSRRAKKSTRK KKKHRKKKGVNPSGPAAETCTPNYFAPGVPSSVPHLPRLPKAKCFVASPEQAQALDDVLLPRAAPDWRPRHPQQPDHPLG RRPPGSCRRDNPPDLINHPFCPDLGGPEETGPERGTWLVPGRQPSHFRGAAFPAAPRSSAALFLGSDAYGVQPPLGSWVM KRLQDNQAGRPPGTPQILLVSTASQLTASNGPRKNFARKEIRNWGGSTEGGLATDRVLRRGPNPGLIKHSSFFRRRYCAQ TKIQAILDFTTTILPKISVGNLGQCCSTFKIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSGRVGTEPSEKRAPL PRCRVGGPAARKGRAAPLDRMDTPRIFSIDTVHDEIPAVAQLSFRSQERKPSRVLCRRVGS |
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| Protein ID | habu1_s17528_g21945.t2 |
| Definition | - |
>habu1_s17528_g21945.t2 SNETLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTYQPLAGKTSYFHLVTWSVPFVLTVAILAVAQVDGDSVS GICFVGYKNYHYRAGFVLAPIGLVLIIGGYFLIKGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITF GCHFYDFFNQAEWERSFREYVLCEANVTIATQTKKPIPDCGIKNRPSLLVEKINLFAMFGTGISMSTWVWTKATLLIWKR TWGRLTGQSGNEPKRLKKSRMIAKAFSRRKELQQNPQQELSFSLRTVSHEGPVVPPEERASHWLMEGEFSSRRAKKSTRK KKKHRKKKGVNPSGPAAETCTPNYFAPGVPSSVPHLPRLPKAKCFVASPEQAQALDDVLLPRAAPDWRPRHPQQPDHPLG RRPPGSCRRDNPPDLINHPFCPDLGGPEETGPERGTWLVPGRQPSHFRGAAFPAAPRSSAALFLGSDAYGVQPPLGSWVM KRLQDNQAGRPPGTPQILLVSTASQLTASNGPRKNFARKEIRNWGGSTEGGLATDRVLRRGPNPGLIKHSSFFRRRYCAQ TKIQAILDFTTTILPKISVGLVEFTLAEEFWELKSTSPKRTKFEDPWPRPGLFNQWYGYHLWYIGTWQVSQTVASLERRR VCKVAGMEELEETERTSAFHLPDWMIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSGRVGTEPSEKRAPLPRCRV GGPAARKGRAAPLDRMDTPRIFSIDTVHDEIPAVAQLSFRSQERKPSRVLCRRVGS |
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