Gene
| Gene Model ID | habu1_s17_g00109 |
|---|---|
| Locus | habu1_scaffold17 : 52234 ... 108565 : - |
| To GenomeBrowser | habu1_scaffold17:52234..108565 |
| Genes list of scaffold | habu1_scaffold17 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17_g00109.t3 | 1 | 1 | C2 | 209 | 294 | 4.2e-09 | 36.1 | 4.7e-13 | 6.9e-09 | 35.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.7 |
| Brain-1 | 10.2 |
| Eye | 0.4 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 8.8 |
| Spleen | 0.1 |
| Lung | 0.2 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.1 |
| Stomach | 0.3 |
| heart | 0.0 |
| ovary | 7.9 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s17_g00109.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00109.t1 cgcgcttaaagcggccaagccgggcgcgcctgccagcatctttctccgcggctggccagggcgccgagtgggcggatgca gggggccgcggggagcagctcggcgccgctgccggcggcggcaggagcccagcggcgggagcttcacccagctggtccgc agccagtgaggtccctccaggtggccatgctgaatggggagacaagcaactctgcctccaggaatgtggtccgcagctcc agcatcagtggagaaatgtacaatatcgagaagagcaatggtggcaattccgattcagcaagtctctcctccactaagaa gcggagatccagcctaggggccaagatggtagctattgtggggctgtcacagtggagcaggagtactatgcagctcaatc atcctgatggtggcttaaagaaacttcgaagtaacattcgtcgcagcactgagactgggattgctgtggagatgagaaac agggtcacccgtcaaggcagtcgggagtcaaccgatggaagtactaacagcaacagctccgatggcacatttattttccc cacaaccaagctgggagttgaaagccagttcagtgacttcctagatggtcttggaccagcacaaattgtagggcgacaaa cactcgctactccaccaatgggtgatgtccatgttgggatgattgaccggaatggacagctagaggtagaagtgatagaa acccgaggcctcatacccaaactaggatccaagtcttctcctgccacgtacgttaaagtgtatctgctggaaaatggggc ttgcctagccaagaagaaaacaaagaccgtcaagaactatgacccgttgtaccagcaggctcttctgtttgacgagggcc ctcagggtaaaatgctacaggtgaatgctttcctcctctttgaagggtgattgtctggggagactatggccgcatggacc acaagtgcttcatgggcatggctcagattgtcctagatgagctggacctgtccagtgtagtgacaggagacaagatggat tttccaaaaaaaaaaaaaaaaaaaagattaatgtttctccatttggcttgttaactgcatgtacagtatttggacagcaa gtaaagataattaaagccagttttgaaaactgttttg |
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| Transcript ID | habu1_s17_g00109.t2 |
| Definition | - |
>habu1_s17_g00109.t2 ggtggcagagggctggtggatgagtcgattccatgcctcctcggctgggggtctcttgcttcacccagctggtccgcagc cagtgaggtccctccaggtggccatgctgaatggggagacaagcaactctgcctccaggaatgtggtccgcagctccagc atcagtggagaaatgtacaatatcgagaagagcaatggtggcaattccgattcagcaagtctctcctccactaagaagcg gagatccagcctaggggccaagatggtagctattgtggggctgtcacagtggagcaggagtactatgcagctcaatcatc ctgatggtggcttaaagaaacttcgaagtaacattcgtcgcagcactgagactgggattgctgtggagatgagaaacagg gtcacccgtcaaggcagtcgggagtcaaccgatggaagtactaacagcaacagctccgatggcacatttattttccccac aaccaagctgggagttgaaagccagttcagtgacttcctagatggtcttggaccagcacaaattgtagggcgacaaacac tcgctactccaccaatgggtgatgtccatgttgggatgattgaccggaatggacagctagaggtagaagtgatagaaacc cgaggcctcatacccaaactaggatccaagtcttctcctgccacgtacgttaaagtgtatctgctggaaaatggggcttg cctagccaagaagaaaacaaagaccgtcaagaactatgacccgttgtaccagcaggctcttctgtttgacgagggccctc agggtaaaatgctacaggtgattgtctggggagactatggccgcatggaccacaagtgcttcatgggcatggctcagatt gtcctagatgagctggacctgtccagtgtagtgacaggtgtttaattatccaactaggagacaagatggattttccaaaa aaaaaaaaaaaaaaaagattaatgtttctccatttggcttgttaactgcatgtacagtatttggacagcaagtaaagata attaaagccagttttgaaaactgttttg |
|
| Transcript ID | habu1_s17_g00109.t3 |
| Definition | - |
>habu1_s17_g00109.t3 cgcgcttaaagcggccaagccgggcgcgcctgccagcatctttctccgcggctggccagggcgccgagtgggcggatgca gggggccgcggggagcagctcggcgccgctgccggcggcggcaggagcccagcggcgggagcttcacccagctggtccgc agccagtgaggtccctccaggtggccatgctgaatggggagacaagcaactctgcctccaggaatgtggtccgcagctcc agcatcagtggagaaatgtacaatatcgagaagagcaatggtggcaattccgattcagcaagtctctcctccactaagaa gcggagatccagcctaggggccaagatggtagctattgtggggctgtcacagtggagcaggagtactatgcagctcaatc atcctgatggtggcttaaagaaacttcgaagtaacattcgtcgcagcactgagactgggattgctgtggagatgagaaac agggtcacccgtcaaggcagtcgggagtcaaccgatggaagtactaacagcaacagctccgatggcacatttattttccc cacaaccaagctgggagttgaaagccagttcagtgacttcctagatggtcttggaccagcacaaattgtagggcgacaaa cactcgctactccaccaatgggtgatgtccatgttgggatgattgaccggaatggacagctagaggtagaagtgatagaa acccgaggcctcatacccaaactaggatccaagtcttctcctgccacgtacgttaaagtgtatctgctggaaaatggggc ttgcctagccaagaagaaaacaaagaccgtcaagaactatgacccgttgtaccagcaggctcttctgtttgacgagggcc ctcagggtaaaatgctacaggtgattgtctggggagactatggccgcatggaccacaagtgcttcatgggcatggctcag attgtcctagatgagctggacctgtccagtgtagtgacaggtgtttaattatccaactaggagacaagatggattttcca aaaaaaaaaaaaaaaaaaagattaatgtttctccatttggcttgttaactgcatgtacagtatttggacagcaagtaaag ataattaaagccagttttgaaaactgttttg |
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Protein
| Protein ID | habu1_s17_g00109.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00109.t1 MQGAAGSSSAPLPAAAGAQRRELHPAGPQPVRSLQVAMLNGETSNSASRNVVRSSSISGEMYNIEKSNGGNSDSASLSST KKRRSSLGAKMVAIVGLSQWSRSTMQLNHPDGGLKKLRSNIRRSTETGIAVEMRNRVTRQGSRESTDGSTNSNSSDGTFI FPTTKLGVESQFSDFLDGLGPAQIVGRQTLATPPMGDVHVGMIDRNGQLEVEVIETRGLIPKLGSKSSPATYVKVYLLEN GACLAKKKTKTVKNYDPLYQQALLFDEGPQGKMLQVNAFLLFEG |
|
| Protein ID | habu1_s17_g00109.t2 |
| Definition | - |
>habu1_s17_g00109.t2 MLNGETSNSASRNVVRSSSISGEMYNIEKSNGGNSDSASLSSTKKRRSSLGAKMVAIVGLSQWSRSTMQLNHPDGGLKKL RSNIRRSTETGIAVEMRNRVTRQGSRESTDGSTNSNSSDGTFIFPTTKLGVESQFSDFLDGLGPAQIVGRQTLATPPMGD VHVGMIDRNGQLEVEVIETRGLIPKLGSKSSPATYVKVYLLENGACLAKKKTKTVKNYDPLYQQALLFDEGPQGKMLQVI VWGDYGRMDHKCFMGMAQIVLDELDLSSVVTGV |
|
| Protein ID | habu1_s17_g00109.t3 |
| Definition | - |
>habu1_s17_g00109.t3 MQGAAGSSSAPLPAAAGAQRRELHPAGPQPVRSLQVAMLNGETSNSASRNVVRSSSISGEMYNIEKSNGGNSDSASLSST KKRRSSLGAKMVAIVGLSQWSRSTMQLNHPDGGLKKLRSNIRRSTETGIAVEMRNRVTRQGSRESTDGSTNSNSSDGTFI FPTTKLGVESQFSDFLDGLGPAQIVGRQTLATPPMGDVHVGMIDRNGQLEVEVIETRGLIPKLGSKSSPATYVKVYLLEN GACLAKKKTKTVKNYDPLYQQALLFDEGPQGKMLQVIVWGDYGRMDHKCFMGMAQIVLDELDLSSVVTGV |
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