Gene
| Gene Model ID | habu1_s17_g00110 |
|---|---|
| Locus | habu1_scaffold17 : 127636 ... 196396 : + |
| To GenomeBrowser | habu1_scaffold17:127636..196396 |
| Genes list of scaffold | habu1_scaffold17 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear transcription factor y subunit gamma | GO:0005622 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17_g00110.t2 | 1 | 1 | Histone | 37 | 104 | 4.6e-12 | 45.8 | 2.2e-15 | 1.1e-11 | 44.6 |
| habu1_s17_g00110.t2 | 1 | 1 | CBFD_NFYB_HMF | 41 | 104 | 9.8e-22 | 76.8 | 5.7e-25 | 2.8e-21 | 75.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.7 |
| Venom grand-1 | 9.6 |
| Pit, infrared sensing | 10.2 |
| Nose | 9.7 |
| Brain-1 | 8.4 |
| Eye | 9.2 |
| fetal fibroblast | 11.2 |
| venom gland-2 | 8.7 |
| Brain-2 | 7.8 |
| Spleen | 13.4 |
| Lung | 14.1 |
| Liver | 11.9 |
| Kidney | 33.3 |
| Pancreas | 26.3 |
| Small intestine | 11.4 |
| Large intestine | 16.0 |
| Stomach | 14.3 |
| heart | 35.6 |
| ovary | 20.5 |
| cheek muscle | 20.3 |
Transcript
| Transcript ID | habu1_s17_g00110.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00110.t1 cgtcgagcagcaggctaggtcgaatgcctttcagcgttaaagtggaaggaggctgcacggcgtctcattggagtccctgg gagttttgcaccgaggcgggcaggggtcagctgaaagacaaagaaagatggcgaggagtttggggagggcagctgctcca gctttggcccaccgtggacactccagagagcttggccggcctctcctgctgcctttgtttcctctgcctccacgtctctc tctccctctctctctccctctccccccttctctctttttgtgtgtggggaaggaccagcaatggctaaattagccctgtc aggaggaggcataattagctggctgtaaaaaatttaacgctctccctgttaccataatgtccacggatggggggtttgca ggaggcaacagcgatgcccagcaatgtcttcagtctttctggcctcgggtcatggacgagattcgaaacctaacagtgaa agacttcagagtccaggagctcccattggcacgcattaagaagatcatgaaactagatgaagacgtgaagatgatcagcg cagaagctcctgttctgttcgccaaggctgctcagatattcatcacggagttgacactacgagcctggatacacacagaa gacaacaaacgcaggactttgcagagaaatgatattgctatggccatcacgaagtttgatcaatttgactttctcattga catcgttccaagggatgaacttaaacctccaaagcgacaggaggaagtacgccaggctgtgactccggcagaacccgtcc agtactacttcactctggcccagcagccagcagctgtgcaagtccagggccagcagacgggccagcagacaaccacatcc accaccacaatccagcccgggcagattatcatcgctcagcctcagcaagggcagaccactcctgtgaccatgcaggtggg cgaagggcagcaggtacagatcgttcaggcccagccacagggacaggcccagccagcgcagagtgggaccgcgccaacta tgcaagtcatgcaacagatcatcaccaacacgggcgaaatccagcaaataccggtccaacttaacgccggccagctgcag tatatccgcttagctcagcctgtgtctggaacccaggtggtccagggccagatccagacgcttgcagccaacacgcagca gattgcgcagacagacgttcaacaggggcagcagcagttcagccagtttaccgatggacagcaactctaccagatccaac aagtgactatgcctgccggtcaagatatcacccaacccatgttcatccagtccaccaatcagaccacagatggacaggcg ccacaggatccgcccaagtcctatggattaatatattttagaagaggagaatggccatccaatcaggagaaagataaagg agcaagtaggacaagtgataaagtgatggtattttctcctgagagaggagaacgagaaccaatccattacagcttcctga aaaaaaaaatgcagcctggaaagattgaaggcaaacgaggtccaggcagaagaagaacattgtggcttccaaatctaagg gacttgtttggacaaaactcagcagcactttttcgtgcggctgctgataaaaacaggattgccaacatgatcgccaacgt ccgataacggatatggcacaagaagaagatgctacatgaacttctcagggagagttgcattaaacctattaccaatgtca ggttag |
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| Transcript ID | habu1_s17_g00110.t2 |
| Definition | - |
>habu1_s17_g00110.t2 cgtcgagcagcaggctaggtcgaatgcctttcagcgttaaagtggaaggaggctgcacggcgtctcattggagtccctgg gagttttgcaccgaggcgggcaggggtcagctgaaagacaaagaaagatggcgaggagtttggggagggcagctgctcca gctttggcccaccgtggacactccagagagcttggccggcctctcctgctgcctttgtttcctctgcctccacgtctctc tctccctctctctctccctctccccccttctctctttttgtgtgtggggaaggaccagcaatggctaaattagccctgtc aggaggaggcataattagctggctgtaaaaaatttaacgctctccctggaaataacgctattgttggaagcagtcttaac aaagaaatgctgcgcttctaatagcatctttcagtaaactactgtgagagctctagcgattgttcagaaattaatccttg aaagataacttcagtttattgttaccataatgtccacggatggggggtttgcaggaggcaacagcgatgcccagcaatgt cttcagtctttctggcctcgggtcatggacgagattcgaaacctaacagtgaaagacttcagagtccaggagctcccatt ggcacgcattaagaagatcatgaaactagatgaagacgtgaagatgatcagcgcagaagctcctgttctgttcgccaagg ctgctcagatattcatcacggagttgacactacgagcctggatacacacagaagacaacaaacgcaggactttgcagaga aatgatattgctatggccatcacgaagtttgatcaatttgactttctcattgacatcgttccaagggatgaacttaaacc tccaaagcgacaggaggaagtacgccaggctgtgactccggcagaacccgtccagtactacttcactctggcccagcagc cagcagctgtgcaagtccagggccagcagacgggccagcagacaaccacatccaccaccacaatccagcccgggcagatt atcatcgctcagcctcagcaagggcagaccactcctgtgaccatgcaggtgggcgaagggcagcaggtacagatcgttca ggcccagccacagggacaggcccagccagcgcagagtgggaccgcgccaactatgcaagtcatgcaacagatcatcacca acacgggcgaaatccagcaaataccggtccaacttaacgccggccagctgcagtatatccgcttagctcagcctgtgtct ggaacccaggtggtccagggccagatccagacgcttgcagccaacacgcagcagattgcgcagacagacgttcaacaggg gcagcagcagttcagccagtttaccgatggacagcaactctaccagatccaacaagtgactatgcctgccggtcaagata tcacccaacccatgttcatccagtccaccaatcagaccacagatggacaggcgccacaggatccgcccaagtcctatgga ttaatatattttagaagaggagaatggccatccaatcaggagaaagataaaggagcaagtaggacaagtgataaagtgat ggtattttctcctgagagaggagaacgagaaccaatccattacagcttcctgaaaaaaaaaatgcagcctggaaagattg aaggcaaacgaggtccaggcagaagaagaacattgtggcttccaaatctaagggacttgtttggacaaaactcagcagca ctttttcgtgcggctgctgataaaaacaggattgccaacatgatcgccaacgtccgataacggatatggcacaagaagaa gatgctacatgaacttctcagggagagttgcattaaacctattaccaatgtcaggttag |
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Protein
| Protein ID | habu1_s17_g00110.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00110.t1 MSTDGGFAGGNSDAQQCLQSFWPRVMDEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELT LRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQAVTPAEPVQYYFTLAQQPAAVQVQGQQ TGQQTTTSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQPAQSGTAPTMQVMQQIITNTGEIQQIPV QLNAGQLQYIRLAQPVSGTQVVQGQIQTLAANTQQIAQTDVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDITQPMFIQST NQTTDGQAPQDPPKSYGLIYFRRGEWPSNQEKDKGASRTSDKVMVFSPERGEREPIHYSFLKKKMQPGKIEGKRGPGRRR TLWLPNLRDLFGQNSAALFRAAADKNRIANMIANVR |
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| Protein ID | habu1_s17_g00110.t2 |
| Definition | - |
>habu1_s17_g00110.t2 MSTDGGFAGGNSDAQQCLQSFWPRVMDEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELT LRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQAVTPAEPVQYYFTLAQQPAAVQVQGQQ TGQQTTTSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQPAQSGTAPTMQVMQQIITNTGEIQQIPV QLNAGQLQYIRLAQPVSGTQVVQGQIQTLAANTQQIAQTDVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDITQPMFIQST NQTTDGQAPQDPPKSYGLIYFRRGEWPSNQEKDKGASRTSDKVMVFSPERGEREPIHYSFLKKKMQPGKIEGKRGPGRRR TLWLPNLRDLFGQNSAALFRAAADKNRIANMIANVR |
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