Gene
| Gene Model ID | habu1_s17_g00112 |
|---|---|
| Locus | habu1_scaffold17 : 231626 ... 299928 : + |
| To GenomeBrowser | habu1_scaffold17:231626..299928 |
| Genes list of scaffold | habu1_scaffold17 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily kqt member 4 | GO:0005044 GO:0005249 GO:0006898 GO:0006955 GO:0007165 GO:0007605 GO:0008076 GO:0008234 GO:0010466 GO:0030247 GO:0030414 GO:0042472 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17_g00112.t2 | 1 | 1 | Ion_trans | 79 | 262 | 3.5e-25 | 88.4 | 9.3e-29 | 3.5e-25 | 88.4 |
| habu1_s17_g00112.t2 | 1 | 1 | Ion_trans_2 | 191 | 264 | 2.3e-14 | 52.8 | 6.1e-18 | 2.3e-14 | 52.8 |
| habu1_s17_g00112.t2 | 1 | 1 | KCNQ_channel | 405 | 598 | 0.0 | 281.6 | 0.0 | 0.0 | 280.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.3 |
| Brain-1 | 1.8 |
| Eye | 4.0 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.0 |
| Spleen | 5.0 |
| Lung | 1.0 |
| Liver | 0.1 |
| Kidney | 0.5 |
| Pancreas | 0.3 |
| Small intestine | 1.8 |
| Large intestine | 2.6 |
| Stomach | 1.8 |
| heart | 0.2 |
| ovary | 1.8 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s17_g00112.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00112.t1 gacttttttttttgccattgccggcaatggggtgggcacggtttcactatgatgcatctggcccatgggccggcagtttg acacccctggactacaagcaacggcatgacaaagtagcaacaagggtgcactggaagatcagcaagaaataccatttgcc tgcaagcaaaaactgatttatcctggtcttcagctgtctgattttatctgtgttttcaactattcccgagcatcacacat ttgccaatgagtatctcttcatcctggaatttgtcatgattgttgtttttggagtggaatacattgtccgtgtctggtcg gcgggctgctgctgtcgttatcgaggatggcaaggtcgcttccggtttgcccgcaaacctttctgtgtcatcgatttcat cgtctttattgcttctctggccgtcattgcagctggcacccaggggaacatctttgctacctcggccctacgcagcatgc gcttcctgcagatcttacgcatggtgcgcatggaccgccgtggcggtacttggaagcttcttggctcagtggtctatgcc catagcaaggagctgatcacagcatggtacattgggttccttgtccttatcttttcctccttcctggtttacctggtgga aaaagatgccaatgatgattttctcacctatgcagactccctgtggtggggtacgatcacactcaccactatcggctatg gggacaaggttccaaaaacatggctgggccgggtgctgacagcctgcttcgccttgctgggaatctccttctttgccctt cctgcgggaattctaggctcagggtttgctcttaaagtccaagagcaacatcgacaaaagcattttgagaagagaaggac acctgcagcaaatttgatccaggctgcttggcgcctctactccacagacatcaaccgatgctacctgactgctacctggt gttactatgacagcatgcttccctcttttagagaactggtccttatgtttgaccacttgcaccgagctcgcaacggaggg cttaggatctctgaggtgaggaaattccctgatggagctccaccgtcgtatcactccttcacctctggcctgaaagcctc cactcctcctttttacacaggagaaagcaataaaatgggactcaaagaccgcatccgagtgagcaattctcagaagcaag gcagccgggggaagcagcatctggtgcctccactccaccgctcccccagtacggagaacgtcaacgaaggcatcagcccc agcaaggtacagaagagctggagcttcaatgacaggacaaagttccgggcctcattgaggctgaagccccggacgccagt ggacgctgatggtcctgcagaggaaagcagcgaggagaagacctatcaatgtgacttgacttttgaagacatcatgcctg ctgttaagaccttgatccgagcagtcagaattcttaaattcctggtagccaaaagaaagttcaaggagaccctgagacca tatgatgttaaggatgtgattgagcaatactcagctggccacctggacatgcttggcagaatcaaaagtctccagacacg tgtggatcagattgtgggccggggaggtctcaccatggataagaagacacgggagaaaggggaaaaagcaccattggagg ttgacctggtggatgaactcagtatgatgggccgagtggtaaaggtggaaaagcagattcatctgcctttgcaccagaac gatcacctcaactttacttgaagtcttccaattgggggcaaagccactagcaccagagcatttagagcaaatgtagacaa acggtggtcccagcaaccatcaactgtcagtcgtaacttcgccagtgcttctgggcttcctacggtggccgtgatagaat gtaaaactcagtcagcagctttctctgttgggaggcaagtcttgttagtctgacgtaacgggcagaggaatctgtcttta gcctctcagcctcctgtagacatctgccatggttcccagttaactccagcgttttcaggtgcctccaggcttaccgaata attcaattctcttttgaaa |
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| Transcript ID | habu1_s17_g00112.t2 |
| Definition | - |
>habu1_s17_g00112.t2 gacttttttttttgccattgccggcaatggggtgggcacggtttcactatgatgcatctggcccatgggccggcagtttg acacccctggactacaagcaacggcatgacaaagtagcaacaagggtgcactggaagatcagcaagaaataccatttgcc tgcaagcaaaaactgatttatcctggtcttcagctgtctgattttatctgtgttttcaactattcccgagcatcacacat ttgccaatgagtatctcttcatcctggaatttgtcatgattgttgtttttggagtggaatacattgtccgtgtctggtcg gcgggctgctgctgtcgttatcgaggatggcaaggtcgcttccggtttgcccgcaaacctttctgtgtcatcgatttcat cgtctttattgcttctctggccgtcattgcagctggcacccaggggaacatctttgctacctcggccctacgcagcatgc gcttcctgcagatcttacgcatggtgcgcatggaccgccgtggcggtacttggaagcttcttggctcagtggtctatgcc catagcaaggagctgatcacagcatggtacattgggttccttgtccttatcttttcctccttcctggtttacctggtgga aaaagatgccaatgatgattttctcacctatgcagactccctgtggtggggtacgatcacactcaccactatcggctatg gggacaaggttccaaaaacatggctgggccgggtgctgacagcctgcttcgccttgctgggaatctccttctttgccctt cctgcgggaattctaggctcagggtttgctcttaaagtccaagagcaacatcgacaaaagcattttgagaagagaaggac acctgcagcaaatttgatccaggctgcttggcgcctctactccacagacatcaaccgatgctacctgactgctacctggt gttactatgacagcatgcttccctcttttagagaactggtccttatgtttgaccacttgcaccgagctcgcaacggaggg cttaggatctctgaggtgaggaaattccctgatggagctccaccgtcgtatcactccttcacctctggcctgaaagcctc cactcctcctttttacacaggagaaagcaataaaatgggactcaaagaccgcatccgagtgagcaattctcagaagcaag gcagccgggggaagcagcatctggtgcctccactccaccgctcccccagtacggagaacgtcaacgaaggcatcagcccc agcaaggtacagaagagctggagcttcaatgacaggacaaagttccgggcctcattgaggctgaagccccggacgccagt ggacgctgatggtcctgcagaggaaagcagcgaggagaagacctatcaatgtgacttgacttttgaagacatcatgcctg ctgttaagaccttgatccgagcagtcagaattcttaaattcctggtagccaaaagaaagttcaaggagaccctgagacca tatgatgttaaggatgtgattgagcaatactcagctggccacctggacatgcttggcagaatcaaaagtctccagacacg tgtggatcagattgtgggccggggaggtctcaccatggataagaagacacgggagaaaggggaaaaagcaccattggagg ttgacctggtggatgaactcagtatgatgggccgagtggtaaaggtggaaaagcaggttgagtctattgagcacaagctg gacttgttgctaggcgtttactcccagtgcctacggaagggttccatcaactccattagtttgaccgctataccagttca cactggggaaccagacatcacctctgactatcatagtcctgtggaccatgaagacatctctgtctctgctcagaccttga acatctcccgatcggctagcaccaacattgactaacatggcctccccagactagctgtgtaacagcaacacaccagctac atgcagggaggagaggctgggagggagtctttacttcgaaggaggacttgggagacaattcctgactactcttatggagc gtgctcgactgagccgaaaccttctccagcctcaccctgttggtctttcctcatcagattcatctgcctttgcaccagaa cgatcacctcaactttacttgaagtcttccaattgggggcaaagccactagcaccagagcatttagagcaaatgtagaca aacggtggtcccagcaaccatcaactgtcagtcgtaacttcgccagtgcttctgggcttcctacggtggccgtgatagaa tgtaaaactcagtcagcagctttctctgttgggaggcaagtcttgttagtctgacgtaacgggcagaggaatctgtcttt agcctctcagcctcctgtagacatctgccatggttcccagttaactccagcgttttcaggtgcctccaggcttaccgaat aattcaattctcttttgaaa |
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Protein
| Protein ID | habu1_s17_g00112.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00112.t1 MGWARFHYDASGPWAGSLTPLDYKQRHDKVATRVHWKISKKYHLPASKNXFILVFSCLILSVFSTIPEHHTFANEYLFIL EFVMIVVFGVEYIVRVWSAGCCCRYRGWQGRFRFARKPFCVIDFIVFIASLAVIAAGTQGNIFATSALRSMRFLQILRMV RMDRRGGTWKLLGSVVYAHSKELITAWYIGFLVLIFSSFLVYLVEKDANDDFLTYADSLWWGTITLTTIGYGDKVPKTWL GRVLTACFALLGISFFALPAGILGSGFALKVQEQHRQKHFEKRRTPAANLIQAAWRLYSTDINRCYLTATWCYYDSMLPS FRELVLMFDHLHRARNGGLRISEVRKFPDGAPPSYHSFTSGLKASTPPFYTGESNKMGLKDRIRVSNSQKQGSRGKQHLV PPLHRSPSTENVNEGISPSKVQKSWSFNDRTKFRASLRLKPRTPVDADGPAEESSEEKTYQCDLTFEDIMPAVKTLIRAV RILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQTRVDQIVGRGGLTMDKKTREKGEKAPLEVDLVDELSM MGRVVKVEKQIHLPLHQNDHLNFT |
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| Protein ID | habu1_s17_g00112.t2 |
| Definition | - |
>habu1_s17_g00112.t2 MGWARFHYDASGPWAGSLTPLDYKQRHDKVATRVHWKISKKYHLPASKNXFILVFSCLILSVFSTIPEHHTFANEYLFIL EFVMIVVFGVEYIVRVWSAGCCCRYRGWQGRFRFARKPFCVIDFIVFIASLAVIAAGTQGNIFATSALRSMRFLQILRMV RMDRRGGTWKLLGSVVYAHSKELITAWYIGFLVLIFSSFLVYLVEKDANDDFLTYADSLWWGTITLTTIGYGDKVPKTWL GRVLTACFALLGISFFALPAGILGSGFALKVQEQHRQKHFEKRRTPAANLIQAAWRLYSTDINRCYLTATWCYYDSMLPS FRELVLMFDHLHRARNGGLRISEVRKFPDGAPPSYHSFTSGLKASTPPFYTGESNKMGLKDRIRVSNSQKQGSRGKQHLV PPLHRSPSTENVNEGISPSKVQKSWSFNDRTKFRASLRLKPRTPVDADGPAEESSEEKTYQCDLTFEDIMPAVKTLIRAV RILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQTRVDQIVGRGGLTMDKKTREKGEKAPLEVDLVDELSM MGRVVKVEKQVESIEHKLDLLLGVYSQCLRKGSINSISLTAIPVHTGEPDITSDYHSPVDHEDISVSAQTLNISRSASTN ID |
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