Gene
| Gene Model ID | habu1_s17_g00114 |
|---|---|
| Locus | habu1_scaffold17 : 365663 ... 376524 : - |
| To GenomeBrowser | habu1_scaffold17:365663..376524 |
| Genes list of scaffold | habu1_scaffold17 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peflin isoform x1 | GO:0005509 GO:0005737 GO:0044822 GO:0046982 GO:0051592 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s17_g00114.t1 | 1 | 1 | EF-hand_1 | 25 | 49 | 1.5e-10 | 39.6 | 8.4e-09 | 2.1e-05 | 23.4 |
| habu1_s17_g00114.t1 | 1 | 1 | EF-hand_6 | 25 | 51 | 9.0e-09 | 34.5 | 5.8e-08 | 0.00014 | 21.4 |
| habu1_s17_g00114.t1 | 1 | 1 | EF-hand_7 | 25 | 115 | 7.2e-08 | 32.4 | 6.1e-09 | 1.5e-05 | 25.0 |
| habu1_s17_g00114.t1 | 1 | 1 | EF-hand_8 | 26 | 48 | 7.9e-06 | 25.3 | 6.0e-07 | 0.0015 | 18.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s17_g00114.t1 | gi|602626796|ref|XP_007420351.1| | PREDICTED: peflin isoform X1 [Python bivittatus] | 0.0 |
| habu1_s17_g00114.t1 | gi|602626798|ref|XP_007420352.1| | PREDICTED: peflin isoform X2 [Python bivittatus] | 0.0 |
| habu1_s17_g00114.t1 | gi|327281717|ref|XP_003225593.1| | PREDICTED: peflin [Anolis carolinensis] | 0.0 |
| habu1_s17_g00114.t1 | gi|301618237|ref|XP_002938526.1| | PREDICTED: peflin [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s17_g00114.t1 | gi|165970454|gb|AAI58286.1| | LOC100144965 protein [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.0 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 0.7 |
| Nose | 0.8 |
| Brain-1 | 1.1 |
| Eye | 0.8 |
| fetal fibroblast | 1.4 |
| venom gland-2 | 0.9 |
| Brain-2 | 1.4 |
| Spleen | 0.8 |
| Lung | 1.8 |
| Liver | 0.8 |
| Kidney | 1.5 |
| Pancreas | 0.9 |
| Small intestine | 1.1 |
| Large intestine | 1.3 |
| Stomach | 1.0 |
| heart | 1.7 |
| ovary | 2.1 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s17_g00114.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00114.t1 caagcaaggctgtccgccatttttttcccccttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna ccggttgggggtcgcggcattaaaaaggttgagaaccactgatatatagcttcctcaatacctaaaccagtaaattgggt taaggggcaaacctagcttcctaaagatagtccaccattgcctttggcatgtttcagggaaaatctttttcccaatctca tccaagtcttctgttggcattccaaggaacaggataaacttggagacacttcttcaatgggttcaaaatggcatgctagg gcttgtaaaaaaaacaaaacccttcaaacctaattaagcagcctccaaagcggtacgacgctctcatctccctttcagct ttgggttgggaaaaaaataattaacgatacatgttcgacaaaagcaaatctggccggatagacctctatggcttttcagc cctgtggcgttatatacaacagtggcggaatctgttccagcagtttgatcgggaccagtcaggaaacattaactgtaacg aactgcatcaagctctttgccaaatggggtacagtttgagcccccagtttgcccagctgctggtgtcccgttacgcacag aagggctgcgcgcctggcatccagctggaccgcttcatccagatctgcactctcctccagagcatgaccgaagctttccg ggagaaggataccggcatgacaggcaacgcgcggatcagctacgaagacttcctcatgatgtccgttactcatagcatta tcgtcaagcccaacaggacagctctgaagcagaacggagactcatgacgagagcactgtgggcaacctcctcagagggca gggagccactgatgaatggcctggctctgtaggaatccaagacctttgcccttcctccaagccaagcaaataaaaggcag ttcaaggctcaaagtcatgcggagaggcagcctgaagccttataggaaactttaattatgaaactaatttatagcacact aggatacccccagaatacaattttgggagttgctgctagatgagttaacccttaaaatccccctggagtccattcctggt tatgcagttttcgtggccacactatgtaagtgatctgcccttccttctgcaatgacatttggacttcccagcctaaaatt cagctgcaggatttcctcaatgtatcctaaacaagacagataaagagagaaatagggaggatagataaataatagacaga gatggatggatagttggatatatgggtggtaggtaggtaggtaggtaggtaggtagctaggtagatagatagatagatag atagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatag atagatagatagatagatagatagatagatagatgtaggtagatatactgtagatagatagatagatagatagatagata gatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagata gatagatagatagatagatagatatagatgatggatggataataaagagatgagtgaatgatagatta |
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Protein
| Protein ID | habu1_s17_g00114.t1 |
|---|---|
| Definition | - |
>habu1_s17_g00114.t1 MFDKSKSGRIDLYGFSALWRYIQQWRNLFQQFDRDQSGNINCNELHQALCQMGYSLSPQFAQLLVSRYAQKGCAPGIQLD RFIQICTLLQSMTEAFREKDTGMTGNARISYEDFLMMSVTHSIIVKPNRTALKQNGDS |
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