Gene
| Gene Model ID | habu1_s1827_g06737 |
|---|---|
| Locus | habu1_scaffold1827 : 1 ... 41322 : + |
| To GenomeBrowser | habu1_scaffold1827:1..41322 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 4 | GO:0000244 GO:0004843 GO:0005634 GO:0005737 GO:0005886 GO:0006511 GO:0016579 GO:0031397 GO:0031647 GO:0031685 GO:0034394 GO:0042802 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06737.t3 | 1 | 1 | UCH | 21 | 652 | 0.0 | 292.1 | 0.0 | 0.0 | 289.8 |
| habu1_s1827_g06737.t3 | 2 | 1 | UCH_1 | 23 | 203 | 6.3e-20 | 71.7 | 4.7e-11 | 1.2e-07 | 31.5 |
| habu1_s1827_g06737.t3 | 2 | 2 | UCH_1 | 498 | 634 | 6.3e-20 | 71.7 | 4.8e-13 | 1.2e-09 | 38.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06737.t3 | gi|697477746|ref|XP_009671394.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.7 |
| Venom grand-1 | 17.4 |
| Pit, infrared sensing | 15.6 |
| Nose | 16.9 |
| Brain-1 | 9.9 |
| Eye | 14.3 |
| fetal fibroblast | 22.9 |
| venom gland-2 | 20.1 |
| Brain-2 | 7.9 |
| Spleen | 5.9 |
| Lung | 5.2 |
| Liver | 3.5 |
| Kidney | 4.9 |
| Pancreas | 1.8 |
| Small intestine | 6.2 |
| Large intestine | 5.3 |
| Stomach | 5.0 |
| heart | 20.5 |
| ovary | 39.1 |
| cheek muscle | 147.5 |
Transcript
| Transcript ID | habu1_s1827_g06737.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06737.t1 aaccttgaatctagaagactcccagattatgcaccaagtctgactggggtagcatcatcccctccagtacaaaaaatgac tgaggaaacatgccttttgtgtcatgcccctatcctctggagcagcatccaaaagatatatggacagcacccaaaaaacc cttaagacctggctttgtttctaaacctcgagttaatatggttgttaactattgatatgaagtttgtaaaccaactgaag atagtgctgaatgtgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagtt ctttacggccaaccgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcg aattggacgttatgtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttca ctgataaagctgaaggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggt gcttctcagtctgaagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgt gaattcttatgggacgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttg ctattgattgggattctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtg tttcagtcgcaaaaaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttgggga acatgatccctggtattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgca ttttggtagtgcatttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatc agggatttgaacatgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatca ctatggaggcttggatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctc cagcttctgaagaacaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagc cattctttttgcccaagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattct ctaacatgacaatgtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaa aataaatagaggaagcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaac tgttcaataaaattttattgtctaaatctgact |
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| Transcript ID | habu1_s1827_g06737.t2 |
| Definition | - |
>habu1_s1827_g06737.t2 tggctcgagcttttcttatagttcttacaacagcagggaaagtcttcagtcacagcctggactctgtgggctcagtaatc taggaaatacatgtttcatgaactcggctctacagtgtttgagtaacacacctcccttgactgactatttcttggaagat aaatatgaagctgaaataaaccaagataatcctctgggaatgaggggagaaattgcagaagcgtatgcagaactcatcaa acaaatgtggtctggccggaattctcatgtagcccctcgtatgttcaaaacccaggttggccgttttgctcctcagtttt caggataccaacaacaagattctcaggagcttctggcctttcttttggatggcttacatgaggatttaaacagagtaaag aagaaaccatatttggaattgaaggatgctaatgggagacctgattcgatggttgcaaaggaagcctgggagaaccatca attgcgtaatgactctataattgtagatatttttcacggactcttcaaatccacattggtctgccccaaatgttctaaaa tttcagttacctttgatccattttgctatttaacactccctttgcccttgaagaaagatagatccatggaggtattcttg gtgtttgcagatccacagcgcaaacctatgcaattccgaatagtagtgcccatgatgggtggtatatctgatctgtgtga tgcattgtccaaaatttctgggatccctgcagaaaatatggtggtgacagaggtctataatcacagattccagaaaattt tccaaatggatgaaggcttaactcatattatgccaaaggacaatatatttgtatatgaagtttgtaaaccaactgaagat agtgctgaatgtgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagttct ttacggccaaccgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcgaa ttggacgttatgtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttcact gataaagctgaaggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggtgc ttctcagtctgaagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgtga attcttatgggacgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttgct attgattgggattctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtgtt tcagtcgcaaaaaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttggggaac atgatccctggtattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgcatt ttggtagtgcatttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatcag ggatttgaacatgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatcact atggaggcttggatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctcca gcttctgaagaacaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagcca ttctttttgcccaagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattctct aacatgacaatgtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaaaa taaatagaggaagcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaactg ttcaataaaattttattgtctaaatctgact |
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| Transcript ID | habu1_s1827_g06737.t3 |
| Definition | - |
>habu1_s1827_g06737.t3 tggctcgagcttttcttatagttcttacaacagcagggaaagtcttcagtcacagcctggactctgtgggctcagtaatc taggaaatacatgtttcatgaactcggctctacagtgtttgagtaacacacctcccttgactgactatttcttggaagat aaatatgaagctgaaataaaccaagataatcctctgggaatgaggggagaaattgcagaagcgtatgcagaactcatcaa acaaatgtggtctggccggaattctcatgtagcccctcgtatgttcaaaacccaggttggccgttttgctcctcagtttt caggataccaacaacaagattctcaggagcttctggcctttcttttggatggcttacatgaggatttaaacagagtaaag aagaaaccatatttggaattgaaggatgctaatgggagacctgattcgatggttgcaaaggaagcctgggagaaccatca attgcgtaatgactctataattgtagatatttttcacggactcttcaaatccacattggtctgccccaaatgttctaaaa tttcagttacctttgatccattttgctatttaacactccctttgcccttgaagaaagatagatccatggaggtattcttg gtgtttgcagatccacagcgcaaacctatgcaattccgaatagtagtgcccatgatgggtggtatatctgatctgtgtga tgcattgtccaaaatttctgggatccctgcagaaaatatggtggtgacagaggtctataatcacagattccagaaaattt tccaaatggatgaaggcttaactcatattatgccaaaggacaatatatttgtagccatgaagggttttcaaggtgttggc aagcaagactttgaactgaattcagaagccaccagtaaaaaatatgaagtttgtaaaccaactgaagatagtgctgaatg tgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagttctttacggccaac cgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcgaattggacgttat gtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttcactgataaagctga aggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggtgcttctcagtctg aagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgtgaattcttatggg acgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttgctattgattggga ttctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtgtttcagtcgcaaa aaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttggggaacatgatccctgg tattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgcattttggtagtgca tttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatcagggatttgaaca tgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatcactatggaggcttg gatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctccagcttctgaaga acaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagccattctttttgcc caagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattctctaacatgacaat gtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaaaataaatagagga agcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaactgttcaataaaat tttattgtctaaatctgact |
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Protein
| Protein ID | habu1_s1827_g06737.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06737.t1 MPFVSCPYPLEQHPKDIWTAPKKPLRPGFVSKPRVNMVVNYXYEVCKPTEDSAECVTLSVYFREKKARQSSATPGTVLYG QPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAEGDVEEMEHQDSEENKQKTPDAGASQ SEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWDSDTRKLLFDEHEAQAFEKYNSVFQS QKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKLDAVVDFPIRDL NMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEEQIVTKAAYVLFYQRRDVKLKGSHSF CPSMEPESEECDGMDTN |
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| Protein ID | habu1_s1827_g06737.t2 |
| Definition | - |
>habu1_s1827_g06737.t2 GSSFSYSSYNSRESLQSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQDNPLGMRGEIAEAYAELIK QMWSGRNSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSMVAKEAWENHQ LRNDSIIVDIFHGLFKSTLVCPKCSKISVTFDPFCYLTLPLPLKKDRSMEVFLVFADPQRKPMQFRIVVPMMGGISDLCD ALSKISGIPAENMVVTEVYNHRFQKIFQMDEGLTHIMPKDNIFVYEVCKPTEDSAECVTLSVYFREKKARQSSATPGTVL YGQPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAEGDVEEMEHQDSEENKQKTPDAGA SQSEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWDSDTRKLLFDEHEAQAFEKYNSVF QSQKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKLDAVVDFPIR DLNMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEEQIVTKAAYVLFYQRRDVKLKGSH SFCPSMEPESEECDGMDTN |
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| Protein ID | habu1_s1827_g06737.t3 |
| Definition | - |
>habu1_s1827_g06737.t3 GSSFSYSSYNSRESLQSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQDNPLGMRGEIAEAYAELIK QMWSGRNSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSMVAKEAWENHQ LRNDSIIVDIFHGLFKSTLVCPKCSKISVTFDPFCYLTLPLPLKKDRSMEVFLVFADPQRKPMQFRIVVPMMGGISDLCD ALSKISGIPAENMVVTEVYNHRFQKIFQMDEGLTHIMPKDNIFVAMKGFQGVGKQDFELNSEATSKKYEVCKPTEDSAEC VTLSVYFREKKARQSSATPGTVLYGQPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAE GDVEEMEHQDSEENKQKTPDAGASQSEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWD SDTRKLLFDEHEAQAFEKYNSVFQSQKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVH LKRFSYNRYWRDKLDAVVDFPIRDLNMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEE QIVTKAAYVLFYQRRDVKLKGSHSFCPSMEPESEECDGMDTN |
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