Gene
Gene Model ID | habu1_s1827_g06737 |
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Locus | habu1_scaffold1827 : 1 ... 41322 : + |
To GenomeBrowser | habu1_scaffold1827:1..41322 |
Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
Annotation | GO |
---|---|
ubiquitin carboxyl-terminal hydrolase 4 | GO:0000244 GO:0004843 GO:0005634 GO:0005737 GO:0005886 GO:0006511 GO:0016579 GO:0031397 GO:0031647 GO:0031685 GO:0034394 GO:0042802 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1827_g06737.t3 | 1 | 1 | UCH | 21 | 652 | 0.0 | 292.1 | 0.0 | 0.0 | 289.8 |
habu1_s1827_g06737.t3 | 2 | 1 | UCH_1 | 23 | 203 | 6.3e-20 | 71.7 | 4.7e-11 | 1.2e-07 | 31.5 |
habu1_s1827_g06737.t3 | 2 | 2 | UCH_1 | 498 | 634 | 6.3e-20 | 71.7 | 4.8e-13 | 1.2e-09 | 38.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s1827_g06737.t3 | gi|697477746|ref|XP_009671394.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Struthio camelus australis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 14.7 |
Venom grand-1 | 17.4 |
Pit, infrared sensing | 15.6 |
Nose | 16.9 |
Brain-1 | 9.9 |
Eye | 14.3 |
fetal fibroblast | 22.9 |
venom gland-2 | 20.1 |
Brain-2 | 7.9 |
Spleen | 5.9 |
Lung | 5.2 |
Liver | 3.5 |
Kidney | 4.9 |
Pancreas | 1.8 |
Small intestine | 6.2 |
Large intestine | 5.3 |
Stomach | 5.0 |
heart | 20.5 |
ovary | 39.1 |
cheek muscle | 147.5 |
Transcript
Transcript ID | habu1_s1827_g06737.t1 |
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Definition | - |
>habu1_s1827_g06737.t1 aaccttgaatctagaagactcccagattatgcaccaagtctgactggggtagcatcatcccctccagtacaaaaaatgac tgaggaaacatgccttttgtgtcatgcccctatcctctggagcagcatccaaaagatatatggacagcacccaaaaaacc cttaagacctggctttgtttctaaacctcgagttaatatggttgttaactattgatatgaagtttgtaaaccaactgaag atagtgctgaatgtgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagtt ctttacggccaaccgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcg aattggacgttatgtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttca ctgataaagctgaaggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggt gcttctcagtctgaagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgt gaattcttatgggacgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttg ctattgattgggattctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtg tttcagtcgcaaaaaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttgggga acatgatccctggtattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgca ttttggtagtgcatttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatc agggatttgaacatgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatca ctatggaggcttggatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctc cagcttctgaagaacaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagc cattctttttgcccaagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattct ctaacatgacaatgtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaa aataaatagaggaagcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaac tgttcaataaaattttattgtctaaatctgact |
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Transcript ID | habu1_s1827_g06737.t2 |
Definition | - |
>habu1_s1827_g06737.t2 tggctcgagcttttcttatagttcttacaacagcagggaaagtcttcagtcacagcctggactctgtgggctcagtaatc taggaaatacatgtttcatgaactcggctctacagtgtttgagtaacacacctcccttgactgactatttcttggaagat aaatatgaagctgaaataaaccaagataatcctctgggaatgaggggagaaattgcagaagcgtatgcagaactcatcaa acaaatgtggtctggccggaattctcatgtagcccctcgtatgttcaaaacccaggttggccgttttgctcctcagtttt caggataccaacaacaagattctcaggagcttctggcctttcttttggatggcttacatgaggatttaaacagagtaaag aagaaaccatatttggaattgaaggatgctaatgggagacctgattcgatggttgcaaaggaagcctgggagaaccatca attgcgtaatgactctataattgtagatatttttcacggactcttcaaatccacattggtctgccccaaatgttctaaaa tttcagttacctttgatccattttgctatttaacactccctttgcccttgaagaaagatagatccatggaggtattcttg gtgtttgcagatccacagcgcaaacctatgcaattccgaatagtagtgcccatgatgggtggtatatctgatctgtgtga tgcattgtccaaaatttctgggatccctgcagaaaatatggtggtgacagaggtctataatcacagattccagaaaattt tccaaatggatgaaggcttaactcatattatgccaaaggacaatatatttgtatatgaagtttgtaaaccaactgaagat agtgctgaatgtgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagttct ttacggccaaccgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcgaa ttggacgttatgtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttcact gataaagctgaaggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggtgc ttctcagtctgaagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgtga attcttatgggacgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttgct attgattgggattctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtgtt tcagtcgcaaaaaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttggggaac atgatccctggtattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgcatt ttggtagtgcatttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatcag ggatttgaacatgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatcact atggaggcttggatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctcca gcttctgaagaacaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagcca ttctttttgcccaagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattctct aacatgacaatgtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaaaa taaatagaggaagcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaactg ttcaataaaattttattgtctaaatctgact |
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Transcript ID | habu1_s1827_g06737.t3 |
Definition | - |
>habu1_s1827_g06737.t3 tggctcgagcttttcttatagttcttacaacagcagggaaagtcttcagtcacagcctggactctgtgggctcagtaatc taggaaatacatgtttcatgaactcggctctacagtgtttgagtaacacacctcccttgactgactatttcttggaagat aaatatgaagctgaaataaaccaagataatcctctgggaatgaggggagaaattgcagaagcgtatgcagaactcatcaa acaaatgtggtctggccggaattctcatgtagcccctcgtatgttcaaaacccaggttggccgttttgctcctcagtttt caggataccaacaacaagattctcaggagcttctggcctttcttttggatggcttacatgaggatttaaacagagtaaag aagaaaccatatttggaattgaaggatgctaatgggagacctgattcgatggttgcaaaggaagcctgggagaaccatca attgcgtaatgactctataattgtagatatttttcacggactcttcaaatccacattggtctgccccaaatgttctaaaa tttcagttacctttgatccattttgctatttaacactccctttgcccttgaagaaagatagatccatggaggtattcttg gtgtttgcagatccacagcgcaaacctatgcaattccgaatagtagtgcccatgatgggtggtatatctgatctgtgtga tgcattgtccaaaatttctgggatccctgcagaaaatatggtggtgacagaggtctataatcacagattccagaaaattt tccaaatggatgaaggcttaactcatattatgccaaaggacaatatatttgtagccatgaagggttttcaaggtgttggc aagcaagactttgaactgaattcagaagccaccagtaaaaaatatgaagtttgtaaaccaactgaagatagtgctgaatg tgtcacgctctcagtttacttcagagaaaagaaagcaaggcaatccagtgctaccccagggacagttctttacggccaac cgctgctcatagctgtacccaaacacaaactaacaatagattatttgtacaatgttatattggagcgaattggacgttat gtaaaaattaatttaaaagaagaatattctgatgtgtgtctggacagtgacacttgcaatggcttcactgataaagctga aggtgatgttgaggagatggagcatcaggatagtgaagaaaacaaacagaaaacaccagatgcaggtgcttctcagtctg aagacagggatgagcaggtggaagggaagcagcatcacaaaaagcggcttttcagtttcagttttgtgaattcttatggg acgtctgaagtaaactgccttactacagaaggaaagatcctcaaactgagttcctatgcaactgttgctattgattggga ttctgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaatacaacagtgtgtttcagtcgcaaa aaaagaaatcttctgtagcccttagagaatgtattgaactttttacaactatggagacgcttggggaacatgatccctgg tattgtcctaattgcaagaaacatcaacaagccactaagaaatttgatctttggtcgttgccacgcattttggtagtgca tttaaaacgcttttcatacaatcgatattggagggataaacttgacgcggtagttgacttccctatcagggatttgaaca tgtctgagtttgttggtgatccagcagcaagtccatatgtatatgacttaattgctgtttccaatcactatggaggcttg gatactgcttatgctaagaataaaatcaatggaaaatggtactactttgatgacagcaatgtatctccagcttctgaaga acaaatagtgacaaaggcagcatatgtactgttttaccaacgtagagatgtcaagctcaaggggagccattctttttgcc caagcatggaaccagaatctgaagaatgtgatggcatggatactaactgaatttgtttggttattctctaacatgacaat gtatctgaggacttattttgaacccctgtagggctactggacagcacaggaggcctcagcactgaaaaataaatagagga agcaataagatggcaaacttgggcatattctttaatctaagagtttttactcaaattttatcttaactgttcaataaaat tttattgtctaaatctgact |
Protein
Protein ID | habu1_s1827_g06737.t1 |
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Definition | - |
>habu1_s1827_g06737.t1 MPFVSCPYPLEQHPKDIWTAPKKPLRPGFVSKPRVNMVVNYXYEVCKPTEDSAECVTLSVYFREKKARQSSATPGTVLYG QPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAEGDVEEMEHQDSEENKQKTPDAGASQ SEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWDSDTRKLLFDEHEAQAFEKYNSVFQS QKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKLDAVVDFPIRDL NMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEEQIVTKAAYVLFYQRRDVKLKGSHSF CPSMEPESEECDGMDTN |
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Protein ID | habu1_s1827_g06737.t2 |
Definition | - |
>habu1_s1827_g06737.t2 GSSFSYSSYNSRESLQSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQDNPLGMRGEIAEAYAELIK QMWSGRNSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSMVAKEAWENHQ LRNDSIIVDIFHGLFKSTLVCPKCSKISVTFDPFCYLTLPLPLKKDRSMEVFLVFADPQRKPMQFRIVVPMMGGISDLCD ALSKISGIPAENMVVTEVYNHRFQKIFQMDEGLTHIMPKDNIFVYEVCKPTEDSAECVTLSVYFREKKARQSSATPGTVL YGQPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAEGDVEEMEHQDSEENKQKTPDAGA SQSEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWDSDTRKLLFDEHEAQAFEKYNSVF QSQKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKLDAVVDFPIR DLNMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEEQIVTKAAYVLFYQRRDVKLKGSH SFCPSMEPESEECDGMDTN |
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Protein ID | habu1_s1827_g06737.t3 |
Definition | - |
>habu1_s1827_g06737.t3 GSSFSYSSYNSRESLQSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQDNPLGMRGEIAEAYAELIK QMWSGRNSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSMVAKEAWENHQ LRNDSIIVDIFHGLFKSTLVCPKCSKISVTFDPFCYLTLPLPLKKDRSMEVFLVFADPQRKPMQFRIVVPMMGGISDLCD ALSKISGIPAENMVVTEVYNHRFQKIFQMDEGLTHIMPKDNIFVAMKGFQGVGKQDFELNSEATSKKYEVCKPTEDSAEC VTLSVYFREKKARQSSATPGTVLYGQPLLIAVPKHKLTIDYLYNVILERIGRYVKINLKEEYSDVCLDSDTCNGFTDKAE GDVEEMEHQDSEENKQKTPDAGASQSEDRDEQVEGKQHHKKRLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWD SDTRKLLFDEHEAQAFEKYNSVFQSQKKKSSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVH LKRFSYNRYWRDKLDAVVDFPIRDLNMSEFVGDPAASPYVYDLIAVSNHYGGLDTAYAKNKINGKWYYFDDSNVSPASEE QIVTKAAYVLFYQRRDVKLKGSHSFCPSMEPESEECDGMDTN |