Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1827_g06738
Locus habu1_scaffold1827 : 41886 ... 47501 : +
To GenomeBrowser habu1_scaffold1827:41886..47501
Genes list of scaffold habu1_scaffold1827

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1827_g06738.t1 gi|602638076|ref|XP_007425870.1| PREDICTED: uncharacterized protein C3orf62 homolog [Python bivittatus] 0.0
habu1_s1827_g06738.t1 gi|637270724|ref|XP_008103228.1| PREDICTED: uncharacterized protein C3orf62 homolog isoform X2 [Anolis carolinensis] 0.0
habu1_s1827_g06738.t1 gi|637270720|ref|XP_008103227.1| PREDICTED: uncharacterized protein C3orf62 homolog isoform X1 [Anolis carolinensis] 0.0
habu1_s1827_g06738.t1 gi|591374295|ref|XP_007061837.1| PREDICTED: uncharacterized protein C3orf62 homolog [Chelonia mydas] 6.02558e-44
habu1_s1827_g06738.t1 gi|558137050|ref|XP_006117691.1| PREDICTED: uncharacterized protein C3orf62 homolog, partial [Pelodiscus sinensis] 3.0e-32

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.4
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.2
Brain-1 0.1
Eye 0.2
fetal fibroblast 0.1
venom gland-2 0.1
Brain-2 0.2
Spleen 0.2
Lung 0.4
Liver 0.0
Kidney 0.1
Pancreas 0.0
Small intestine 0.2
Large intestine 0.5
Stomach 0.0
heart 0.2
ovary 0.3
cheek muscle 0.2

Transcript
Transcript IDhabu1_s1827_g06738.t1
Definition-
>habu1_s1827_g06738.t1
acagtaatatccaattactttggatgtgtttcaacccattcattttcttcccaggtgagatgtctgaaaagttaagtagg
tgccgtaaggagctagcagcagctattgatcgagcaatggaagatctctccattcctttccttccttcccaagataccag
caacaaccaggactctgatttgccaatagtgcagctttctacaccccctaatgcagatatctttaattctaagggagagg
taatatctcctactgtatattgcccccaaccatcttcggcagtttcttctcctcctgaaaaagagaatcccttccttagg
tcaaatctctttccagtgacggtaacctccagtattccatgtaccaaacgggaaccattgatgagcaaggaaaatacatg
gttgcacccaccaatttttatggctgacaagcagtattttatcagcctgcaagacagtgagagatggaagaaaggacaag
taagcaaaactgatgaacgatccatgaagtcagaaacaaacataatttcctgtgatgttcctccagagaatccaaaagat
caggaagatatgtctgctgacgaagcctcagctgtccatctgggtgagaggaacaatttcagaaaggtcctagaacacag
cccagaagatgaagctatcattgaaaccttgttggatatggaagaagaatacagattgaacagctccaccttgcaccagc
tgcactaagcaggtggtataaagtgtgagctattttacaatttggtagtaacatttttaaaccatgcaagcagtcctgac
ctttgccagatacacaattaaagaaaccaacttataatattgca

Protein
Protein IDhabu1_s1827_g06738.t1
Definition-
>habu1_s1827_g06738.t1
MSEKLSRCRKELAAAIDRAMEDLSIPFLPSQDTSNNQDSDLPIVQLSTPPNADIFNSKGEVISPTVYCPQPSSAVSSPPE
KENPFLRSNLFPVTVTSSIPCTKREPLMSKENTWLHPPIFMADKQYFISLQDSERWKKGQVSKTDERSMKSETNIISCDV
PPENPKDQEDMSADEASAVHLGERNNFRKVLEHSPEDEAIIETLLDMEEEYRLNSSTLHQLH

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