Gene
| Gene Model ID | habu1_s1827_g06739 |
|---|---|
| Locus | habu1_scaffold1827 : 49352 ... 65015 : - |
| To GenomeBrowser | habu1_scaffold1827:49352..65015 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| er membrane protein complex subunit 3 | GO:0034975 GO:0072546 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06739.t1 | 1 | 1 | DUF106 | 5 | 191 | 0.0 | 172.6 | 0.0 | 0.0 | 172.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06739.t1 | gi|602638061|ref|XP_007425864.1| | PREDICTED: ER membrane protein complex subunit 3-like [Python bivittatus] | 0.0 |
| habu1_s1827_g06739.t1 | gi|310750356|ref|NP_001185541.1| | transmembrane protein 111 [Gallus gallus] | 0.0 |
| habu1_s1827_g06739.t1 | gi|557291522|ref|XP_006028321.1| | PREDICTED: ER membrane protein complex subunit 3 isoform X3 [Alligator sinensis] | 0.0 |
| habu1_s1827_g06739.t1 | gi|527255165|ref|XP_005145866.1| | PREDICTED: ER membrane protein complex subunit 3 [Melopsittacus undulatus] | 0.0 |
| habu1_s1827_g06739.t1 | gi|558215292|ref|XP_006134591.1| | PREDICTED: ER membrane protein complex subunit 3 isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.5 |
| Venom grand-1 | 19.3 |
| Pit, infrared sensing | 11.1 |
| Nose | 14.6 |
| Brain-1 | 10.0 |
| Eye | 12.4 |
| fetal fibroblast | 16.1 |
| venom gland-2 | 27.8 |
| Brain-2 | 11.2 |
| Spleen | 11.0 |
| Lung | 10.1 |
| Liver | 15.5 |
| Kidney | 12.4 |
| Pancreas | 18.6 |
| Small intestine | 15.1 |
| Large intestine | 10.7 |
| Stomach | 13.2 |
| heart | 10.5 |
| ovary | 22.3 |
| cheek muscle | 17.2 |
Transcript
| Transcript ID | habu1_s1827_g06739.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06739.t1 tgaagggggaccagagattaaagattgaagctggtgtgcatgaccagaactcttctgaaaaatgagtgagccagaactgt tgttggattccaatattcgattatgggtggtgcttcccatagtcttcatcaccttctttgtggggatgattcgtcactat gtatccatccttctccagagtgataaaaagcttactcaggaacaagtgtctgacagccaagttctcattcgaagtagagt cctcagagaaaatggaaaatacattccaaagcagtcatttctgacacggaagtattatttcaataatcctgatgatgggt tctttaagaaaactaaaagaaaggtagtgcctccttccccaatgacagatcctaccatgctgacagatatgatgaagggg aatgtaacaaatgtattacctatgattttaattggtggttggatcaacatgaccttctcaggctttgtcacaacaaaagt cccctttcctctgacgttgcgttttaaaccaatgctacaacagggtattgaattgcttactttggatgcatcttgggtaa gctcagcttcttggtattttctaaatgtctttggactcagaagcatttatacactcattcttggccaagataacgctgct gatcagtccagagtaatgcaggagcagatgacaggagcagccatggccatgcctgcagatactaataaagcattcaagac agaatgggaggctctagaactgactgaccatcagtgggcgctggaggatgttgaggaagaactcatggctaaagatctcc actttgaaggcatgtttaaggaagaattgcagacatccatgttctgaggaccttcatttggttggcattaaatcagttat gtttaatatcagaagtgtgttcttattgatgaccagaataaatttgatcagaatttctgtgaaagatgtagctgcaggca aaaagtcttgcttcaagagcctcttctgagactgatgttttctgagttatcttagaactcatgctgatacttcttcattg atcaaacgtaaactactaaacttgttacccaagccaaactcattggaagaagaatttatatgttgtggatagcggaaatg tattaagaattcaatacactgctgctgtacctgttaaatgccaccattttgcaaaagatggtttaatgctgaagttcctt gacagctagggcttagccgcaccacatttgagaaactacctatccttaaagacttgaatttaggtggaaagagcatgcaa gtgttctctctgcttgctaccatttggttatccagatgttcaagttactagaaagtcttggagctttgccaagagctgga tgaagagtccccctttcctttctaatttttcttctgtcacctaggtaaacaacagtaaccgaatcctgttaccaaaatgg aaagtaaataaatttcactgtagtagatatcactgactagaataacttggattttaattttagaatggaatactggtaaa atatggattagaattggataaattcctcttttcattgagatatgttttttatggattttagatctacagaaaatgggctt taggtcttaaactaatctctcaagggacaagcatttaaagtttcaacatgtatatgaaataagatttcctatgaattatg ttcatggcttttggactagagggcgttgtgtgtatactcaagacaatacatgttcctgagttcacctggctaaaatcaga ttgactgaataatttctttagttaccagccaaacgttatatgtggctgtactcggttgtcagactgtgacactaaagtag cagtgcattaaaagactagttcagattttttaacagtgtggtgtatgtacaatatttcaaatatttcatgttacaatttt tcagaatagcattggccttgatctacccttgataagcctgaatttcccacccagggagacctttgctgagaattctgaga attgatgctcatgcacttgttgaattatgctgtatcatagttcttttacaactgtgaaatggcaatgctagactaaggaa aatgaataaatccatggatcacattgtcccaatggaaacctctggggatgcatgttacatttaatattgttcccatcctt tttctgtcacaaactaaaaattggaatgagacctctttttcttgttccttaagtctacccaatgttgagcagcttaggga ggggggattatgaagaaagtgaggtttaagccattcctcctctcagattgttcagcttattgcaaacactgcttggttct gttaaagggggatggaggcttggacatggcctatagaccagatatttcccattgctgtctaagagggggaaagatatata tgcaccgtgaagctagctatgccagtgaagcccatatgagcatccccacactttgtttcttctgctgtaggcaggtttct ctgttttagattcacgagcttaatcctatctcatatctcacatatgaagatagtttattctgtaattaaggtatgaaaat tgcttattttttttttactttcacggcacccaacctctatctagtttaggcttgtttaagtctattttatgcaaccaaat atttttgcagcagtaatgcaaattgatttgtatctcagttcccactaacttaaaaaacacccaggaactctttgtttcat tgcacgtttgggttgatgggtacagttatttatctgtttcagattcatagcaaatgccatacttaagttgcactttaata gtacacatttttatatgatatataaagaaattcattctatgctagtgtgctcatatcaaataattatatgtccttatatc aagtgatttaagaccttgaagaaagtggcattctaaagattgaatatttactgagaaataatatatctgtaaagtatctg aagtatagatatttatatgtaaaatatccatcttcctgatgattgtaaagcaaatcactgacatgattgactcaatttta cagcctttttttgtggtggcgattaagcaaatgctgtagtcataaagccaccactctagttattaagcaaatctcacaat catcaagtgaatccattgttcactatggggtgtttttgccaaaaactggaaataaacaccaggttttggcaaacttgtca taaattgtggtcacgtgaccgcaggatgctgcaaacagccataaatgcagggcacccaaaatgcagttatgtaattggac gcgcgtgtgtgtatctgttagaacttcggaactgggttgtaagtatcttttgggggggaggggtgtctgctggaattttg aacggtaattaaatgaccagttgtatgtcaaggac |
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Protein
| Protein ID | habu1_s1827_g06739.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06739.t1 MSEPELLLDSNIRLWVVLPIVFITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYF NNPDDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLT LDASWVSSASWYFLNVFGLRSIYTLILGQDNAADQSRVMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALEDVEEE LMAKDLHFEGMFKEELQTSMF |
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