Gene
| Gene Model ID | habu1_s1827_g06740 |
|---|---|
| Locus | habu1_scaffold1827 : 65116 ... 115454 : + |
| To GenomeBrowser | habu1_scaffold1827:65116..115454 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fanconi anemia group d2 partial | GO:0000793 GO:0005634 GO:0005794 GO:0006281 GO:0007129 GO:0007276 GO:0010332 GO:0070182 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06740.t2 | 2 | 1 | FancD2 | 1 | 835 | 0.0 | 2215.6 | 0.0 | 0.0 | 1278.2 |
| habu1_s1827_g06740.t2 | 2 | 2 | FancD2 | 862 | 1449 | 0.0 | 2215.6 | 0.0 | 0.0 | 943.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06740.t2 | gi|694836790|ref|XP_009458895.1| | PREDICTED: Fanconi anemia group D2 protein, partial [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.6 |
| Nose | 0.5 |
| Brain-1 | 0.0 |
| Eye | 0.1 |
| fetal fibroblast | 7.2 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 1.5 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.3 |
| Large intestine | 0.2 |
| Stomach | 0.1 |
| heart | 0.2 |
| ovary | 7.8 |
| cheek muscle | 4.5 |
Transcript
| Transcript ID | habu1_s1827_g06740.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06740.t1 ggcgggagatttgcaaaactggaaggggatcgcgcgccgaagtggtgcagcgactgtgttgtacagtagttgctcctcgt tggatacatcagtacctgtcatggcttcaaaacggaaattgttcaaaccccgggcctacagtgaaaatctgatagaagaa ttaccaaaaacaaaaaggcctcgaacctctggaaagaaaaagtctgttccacaagatgatggtgatatagacagcaataa tgtttttgggcatctccttaagactgcagggattacactgaaatcaggagaaaaacagaatgaaatagctgtagatggag caattttacagaaaaagttgaatcaagccttaagaaaacacccttcttatccacagattgttgcagagttcatcagtggc ttggattcccacattgaaaacagagatcattttaggaattgtcttctaccatgcatacctgcacaaaatcaagaaacaaa taatgcagtacattcatactgcgaaagtgtcattaaattgcttcttggtattgagatgttgcagcctgctgtgataaaac tgttatttgaaaagctccctgaattttttcaggaaagtgttggcagtgatggattaaatttgcctcggctgattgtcaat caattaaaatggcttgacaagatagttgacaacaaggatcttgtttcaatgatcatgcagatggtttatgtttcacctac atcaatccaacatgatattattacaagtctgccagaaattctggaagattcccagcatagtgaaattgccaagcaactta gttctttgttaaaggagaacgttgggcttacagttccagtcctagatgcactttcctgtttgaatcttgatatggaactt ctgtctgagatacgccagtctgtcatgatttcagtgtctgctgtaaaagtggaagatttacccgtaatagttaaatttat tcttcattctatgaaggccactgaagcaacagaggtaatttctgaccttcgtaagaagctgaatctggaatcctgtgccg cccttccaagtatccaggcttctcaaagcagactcagcagccaggcacagtcaagtctatctgcaagccaaatgagtatt aacaaggattctttcaagctcctttttgacgtattaaagtcggctcttaaatttcagaagtttgtattagaaggttggat taaggctattgagaatattccttctgcctctgatcataagattctggatatgataatgctgttaataatctatgctacaa ataccaaaaacaagaagcaaattgagagattgttgaagagtaagattcagtcaggttgtttgccagagcagctgctgcag aacgccttccgatatcactcactggttatgagagatcttttcccagcaatcttgtcagttgctgaaagctttgtgaattc agtagatccttgtgttgtctcctttggtagctgcatgtacaagcaagcattcacagcttttgattcttactgccagcagg agattgtgggtgccttggttactcatatatgtggtggcaacaaggttgaagtggatgtttctctggatacattaactgat cttgtgtctgtccatacctcatcagttgttccttacgttgtctttctgaagagcatcttggactatatggataatcttgg tccacagcaaatccggaagctatttcacatcctcagcatgctggcatttagccaggggaatagaaacagccacatccagg atgatatgcacatggtgattagaaagcagctctcaagtactatccctaagtataaacgtattgggattattggagcagtt accatggtctgcagtatggcagccaagaggagcaaagaaaatggaaaattgctggaaagggaacagctgagcaaggaaca acacagacagattataacattgctggagcttgtattctcctgttgtgggcaggttcctcatgccttggctttgtactatg atgaacttgccaacttaattcagaaaggaagtatggatttgcagatcctggcctggattaaggactatgtggtccaagac tttgagaacgattttgtcacagatcttctccagatagaggatagcactttcccattcccgctgaaagctctatatggctt agaagatggtgaaagtgaggggggtattgttgttaacttgctgcccctgttgtcccagagcttttccacgaaccaggatg taacagctgcggaaagcaaggacaaaaggctagtgtctccagtgtgcttgtcgcccttcttccgactgctgaggctctgc atgtcagaactgaataaagggaatatggaggacattgatgccttattagtgtgccctttatatctgaccagcttggaggt gacagaaaaaatagagtctttgtcaaagcaagaacgcgagttcctttgttcgctcttatttcatgcagtgaactggtttc gtgaggttgtaaatgctttctgccgagaagaagaacctagtataaaaggaaaagttttgacccgcttacagaacattacc gagctacagtgtattctagaaaaatgcttagcagcaagccctggatatgctcctcctcttgctaactttgattctgagac cttggaagctgtacctgtcctcaatactacctctgttattaaaaaaaagaacaaaggacaaaaaaaactaaaatcagata gcaaaaacagctttggagataattcacaactggatgagaactcggatataattcaagcagaagctgagacaagtcaacaa gaaaaatctagctccccagaaaaagatccaggaactcctttaatacagctgcagaattacagtgcgtatttccgtgaatt agatttggaagtttttaccgtcctgcactgtggactgctgaccaaatctgttttggacacagagatgcacacaaaaaccc gtgaagtggtgcagctagagccaactgagctcctcttccttttagaagatttgtaccgtaaaatggaacatgtcttaata ctagctcctgcaaagagaaccccttttttgaagggaaaaggaaataaaaatgctggattttcgcatctttgccaaagtac atctcaagaagtgattgagtatgctgctgaacttttaaagccactgtgcaatcacatagaaaatatgcacaaccacttcc agacgctgattacagagaaccatggtgtgattgatggaccaggcgtcaatgttcaggaacatcaattaatgtcatcctgt tatcagcgcttattgcagatctttcgcttcctgtttgcttggaatggattttctcggcatgagaaccatggcttactaaa aacaagtctgcatgtccttgcatgcagacttaagccaggagatagagagcttcctcttgaggacctactcagtcagagtt tccagtatttactgaacttccagcacagcgttcccaatatttactgtgcactgagtcttacccagcttctgcttgtcatt gctgaaaaatctgtggccaatgcaaaaagcaaagaaatagcttccatcacaaaaggtttcctttgccaatcttggatgca gccctgtggaactcgtcagaagggttcccaatttaatgatgctctccatactttgctgaatattcatatggaatacacac atgatatcttgaaggagatagaagacatttcaagcactggggttccagagctgattaaatcttctaaagatggatactct tccacttaccctacactgaccagacaaacttttcccattttcttccgggtgatgataactcacctagaaacttcaataag aagcatatctgctggaaaatcatcggattcaagtgagatccagttggagaagttgttacactggaacctagctgtgcgtg atttccacatccttgttaatttggtcaaggtatttgatagtcgtcctgtactcagtgtttgcttgaagtatggtcgtctg tttatagagacatttttgaagtctggtatgcccctcttggactacagctttaaaaagcacagggaggatgtgcagagttt gttgaaaaccttgcaactaagcaccagacaacttcatcatgtttgtggccactctaagattcatcaagacacaggtctca ccagtcatgtacctctcctaaagaagtccctcgagctatttgtttaccgagtgaaagcaatgctggctctcaatcattgt caggaggctttctgggtgggcatcctcaaaaatagggacttgcagggagaagagatcctttcacaagcatcacaagtaac cgaagcagaagagacagagatgcccacactctctcaaaaggatcctgaagaggaaaaggaagattcagagactgaaggta gaatggacaccaatgatagtgatgaagacagttctgattagaatgtgctataattctgggtgaaactttttggcttagat tattggaatttgttatccatatccctagaagtttataatttgtattcagacaatattaaaataaattggatgagccatgg gc |
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| Transcript ID | habu1_s1827_g06740.t2 |
| Definition | - |
>habu1_s1827_g06740.t2 ggcgggagatttgcaaaactggaaggggatcgcgcgccgaagtggtgcagcgactgtgttgtacagtagttgctcctcgt tggatacatcagtacctgtcatggcttcaaaacggaaattgttcaaaccccgggcctacagtgaaaatctgatagaagaa ttaccaaaaacaaaaaggcctcgaacctctggaaagaaaaagtctgttccacaagatgatggtgatatagacagcaataa tgtttttgggcatctccttaagactgcagggattacactgaaatcaggagaaaaacagaatgaaatagctgtagatggag caattttacagaaaaagttgaatcaagccttaagaaaacacccttcttatccacagattgttgcagagttcatcagtggc ttggattcccacattgaaaacagagatcattttaggaattgtcttctaccatgcatacctgcacaaaatcaagaaacaaa taatgcagtacattcatactgcgaaagtgtcattaaattgcttcttggtattgagatgttgcagcctgctgtgataaaac tgttatttgaaaagctccctgaattttttcaggaaagtgttggcagtgatggattaaatttgcctcggctgattgtcaat caattaaaatggcttgacaagatagttgacaacaaggatcttgtttcaatgatcatgcagatggtttatgtttcacctac atcaatccaacatgatattattacaagtctgccagaaattctggaagattcccagcatagtgaaattgccaagcaactta gttctttgttaaaggagaacgttgggcttacagttccagtcctagatgcactttcctgtttgaatcttgatatggaactt ctgtctgagatacgccagtctgtcatgatttcagtgtctgctgtaaaagtggaagatttacccgtaatagttaaatttat tcttcattctatgaaggccactgaagcaacagaggtaatttctgaccttcgtaagaagctgaatctggaatcctgtgccg cccttccaagtatccaggcttctcaaagcagactcagcagccaggcacagtcaagtctatctgcaagccaaatgagtatt aacaaggattctttcaagctcctttttgacgtattaaagtcggctcttaaatttcagaagtttgtattagaaggttggat taaggctattgagaatattccttctgcctctgatcataagattctggatatgataatgctgttaataatctatgctacaa ataccaaaaacaagaagcaaattgagagattgttgaagagtaagattcagtcaggttgtttgccagagcagctgctgcag aacgccttccgatatcactcactggttatgagagatcttttcccagcaatcttgtcagttgctgaaagctttgtgaattc agtagatccttgtgttgtctcctttggtagctgcatgtacaagcaagcattcacagcttttgattcttactgccagcagg agattgtgggtgccttggttactcatatatgtggtggcaacaaggttgaagtggatgtttctctggatacattaactgat cttgtgtctgtccatacctcatcagttgttccttacgttgtctttctgaagagcatcttggactatatggataatcttgg tccacagcaaatccggaagctatttcacatcctcagcatgctggcatttagccaggggaatagaaacagccacatccagg atgatatgcacatggtgattagaaagcagctctcaagtactatccctaagtataaacgtattgggattattggagcagtt accatggtctgcagtatggcagccaagaggagcaaagaaaatggaaaattgctggaaagggaacagctgagcaaggaaca acacagacagattataacattgctggagcttgtattctcctgttgtgggcaggttcctcatgccttggctttgtactatg atgaacttgccaacttaattcagaaaggaagtatggatttgcagatcctggcctggattaaggactatgtggtccaagac tttgagaacgattttgtcacagatcttctccagatagaggatagcactttcccattcccgctgaaagctctatatggctt agaagatggtgaaagtgaggggggtattgttgttaacttgctgcccctgttgtcccagagcttttccacgaaccaggatg taacagctgcggaaagcaaggacaaaaggctagtgtctccagtgtgcttgtcgcccttcttccgactgctgaggctctgc atgtcagaactgaataaagggaatatggaggacattgatgccttattagtgtgccctttatatctgaccagcttggaggt gacagaaaaaatagagtctttgtcaaagcaagaacgcgagttcctttgttcgctcttatttcatgcagtgaactggtttc gtgaggttgtaaatgctttctgccgagaagaagaacctagtataaaaggaaaagttttgacccgcttacagaacattacc gagctacagtgtattctagaaaaatgcttagcagtcacacaatcgctatttgcaacctttcctgctggcttcccacaagc aaagtcaatgaagaaactggcagggaaggtcaccagttcttttgcaagccctggatatgctcctcctcttgctaactttg attctgagaccttggaagctgtacctgtcctcaatactacctctgttattaaaaaaaagaacaaaggacaaaaaaaacta aaatcagatagcaaaaacagctttggagataattcacaactggatgagaactcggatataattcaagcagaagctgagac aagtcaacaagaaaaatctagctccccagaaaaagatccaggaactcctttaatacagctgcagaattacagtgcgtatt tccgtgaattagatttggaagtttttaccgtcctgcactgtggactgctgaccaaatctgttttggacacagagatgcac acaaaaacccgtgaagtggtgcagctagagccaactgagctcctcttccttttagaagatttgtaccgtaaaatggaaca tgtcttaatactagctcctgcaaagagaaccccttttttgaagggaaaaggaaataaaaatgctggattttcgcatcttt gccaaagtacatctcaagaagtgattgagtatgctgctgaacttttaaagccactgtgcaatcacatagaaaatatgcac aaccacttccagacgctgattacagagaaccatggtgtgattgatggaccaggcgtcaatgttcaggaacatcaattaat gtcatcctgttatcagcgcttattgcagatctttcgcttcctgtttgcttggaatggattttctcggcatgagaaccatg gcttactaaaaacaagtctgcatgtccttgcatgcagacttaagccaggagatagagagcttcctcttgaggacctactc agtcagagtttccagtatttactgaacttccagcacagcgttcccaatatttactgtgcactgagtcttacccagcttct gcttgtcattgctgaaaaatctgtggccaatgcaaaaagcaaagaaatagcttccatcacaaaaggtttcctttgccaat cttggatgcagccctgtggaactcgtcagaagggttcccaatttaatgatgctctccatactttgctgaatattcatatg gaatacacacatgatatcttgaaggagatagaagacatttcaagcactggggttccagagctgattaaatcttctaaaga tggatactcttccacttaccctacactgaccagacaaacttttcccattttcttccgggtgatgataactcacctagaaa cttcaataagaagcatatctgctggaaaatcatcggattcaagtgagatccagttggagaagttgttacactggaaccta gctgtgcgtgatttccacatccttgttaatttggtcaaggtatttgatagtcgtcctgtactcagtgtttgcttgaagta tggtcgtctgtttatagagacatttttgaagtctggtatgcccctcttggactacagctttaaaaagcacagggaggatg tgcagagtttgttgaaaaccttgcaactaagcaccagacaacttcatcatgtttgtggccactctaagattcatcaagac acaggtctcaccagtcatgtacctctcctaaagaagtccctcgagctatttgtttaccgagtgaaagcaatgctggctct caatcattgtcaggaggctttctgggtgggcatcctcaaaaatagggacttgcagggagaagagatcctttcacaagcat cacaagtaaccgaagcagaagagacagagatgcccacactctctcaaaaggatcctgaagaggaaaaggaagattcagag actgaaggtagaatggacaccaatgatagtgatgaagacagttctgattagaatgtgctataattctgggtgaaactttt tggcttagattattggaatttgttatccatatccctagaagtttataatttgtattcagacaatattaaaataaattgga tgagccatgggc |
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Protein
| Protein ID | habu1_s1827_g06740.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06740.t1 MASKRKLFKPRAYSENLIEELPKTKRPRTSGKKKSVPQDDGDIDSNNVFGHLLKTAGITLKSGEKQNEIAVDGAILQKKL NQALRKHPSYPQIVAEFISGLDSHIENRDHFRNCLLPCIPAQNQETNNAVHSYCESVIKLLLGIEMLQPAVIKLLFEKLP EFFQESVGSDGLNLPRLIVNQLKWLDKIVDNKDLVSMIMQMVYVSPTSIQHDIITSLPEILEDSQHSEIAKQLSSLLKEN VGLTVPVLDALSCLNLDMELLSEIRQSVMISVSAVKVEDLPVIVKFILHSMKATEATEVISDLRKKLNLESCAALPSIQA SQSRLSSQAQSSLSASQMSINKDSFKLLFDVLKSALKFQKFVLEGWIKAIENIPSASDHKILDMIMLLIIYATNTKNKKQ IERLLKSKIQSGCLPEQLLQNAFRYHSLVMRDLFPAILSVAESFVNSVDPCVVSFGSCMYKQAFTAFDSYCQQEIVGALV THICGGNKVEVDVSLDTLTDLVSVHTSSVVPYVVFLKSILDYMDNLGPQQIRKLFHILSMLAFSQGNRNSHIQDDMHMVI RKQLSSTIPKYKRIGIIGAVTMVCSMAAKRSKENGKLLEREQLSKEQHRQIITLLELVFSCCGQVPHALALYYDELANLI QKGSMDLQILAWIKDYVVQDFENDFVTDLLQIEDSTFPFPLKALYGLEDGESEGGIVVNLLPLLSQSFSTNQDVTAAESK DKRLVSPVCLSPFFRLLRLCMSELNKGNMEDIDALLVCPLYLTSLEVTEKIESLSKQEREFLCSLLFHAVNWFREVVNAF CREEEPSIKGKVLTRLQNITELQCILEKCLAASPGYAPPLANFDSETLEAVPVLNTTSVIKKKNKGQKKLKSDSKNSFGD NSQLDENSDIIQAEAETSQQEKSSSPEKDPGTPLIQLQNYSAYFRELDLEVFTVLHCGLLTKSVLDTEMHTKTREVVQLE PTELLFLLEDLYRKMEHVLILAPAKRTPFLKGKGNKNAGFSHLCQSTSQEVIEYAAELLKPLCNHIENMHNHFQTLITEN HGVIDGPGVNVQEHQLMSSCYQRLLQIFRFLFAWNGFSRHENHGLLKTSLHVLACRLKPGDRELPLEDLLSQSFQYLLNF QHSVPNIYCALSLTQLLLVIAEKSVANAKSKEIASITKGFLCQSWMQPCGTRQKGSQFNDALHTLLNIHMEYTHDILKEI EDISSTGVPELIKSSKDGYSSTYPTLTRQTFPIFFRVMITHLETSIRSISAGKSSDSSEIQLEKLLHWNLAVRDFHILVN LVKVFDSRPVLSVCLKYGRLFIETFLKSGMPLLDYSFKKHREDVQSLLKTLQLSTRQLHHVCGHSKIHQDTGLTSHVPLL KKSLELFVYRVKAMLALNHCQEAFWVGILKNRDLQGEEILSQASQVTEAEETEMPTLSQKDPEEEKEDSETEGRMDTNDS DEDSSD |
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| Protein ID | habu1_s1827_g06740.t2 |
| Definition | - |
>habu1_s1827_g06740.t2 MASKRKLFKPRAYSENLIEELPKTKRPRTSGKKKSVPQDDGDIDSNNVFGHLLKTAGITLKSGEKQNEIAVDGAILQKKL NQALRKHPSYPQIVAEFISGLDSHIENRDHFRNCLLPCIPAQNQETNNAVHSYCESVIKLLLGIEMLQPAVIKLLFEKLP EFFQESVGSDGLNLPRLIVNQLKWLDKIVDNKDLVSMIMQMVYVSPTSIQHDIITSLPEILEDSQHSEIAKQLSSLLKEN VGLTVPVLDALSCLNLDMELLSEIRQSVMISVSAVKVEDLPVIVKFILHSMKATEATEVISDLRKKLNLESCAALPSIQA SQSRLSSQAQSSLSASQMSINKDSFKLLFDVLKSALKFQKFVLEGWIKAIENIPSASDHKILDMIMLLIIYATNTKNKKQ IERLLKSKIQSGCLPEQLLQNAFRYHSLVMRDLFPAILSVAESFVNSVDPCVVSFGSCMYKQAFTAFDSYCQQEIVGALV THICGGNKVEVDVSLDTLTDLVSVHTSSVVPYVVFLKSILDYMDNLGPQQIRKLFHILSMLAFSQGNRNSHIQDDMHMVI RKQLSSTIPKYKRIGIIGAVTMVCSMAAKRSKENGKLLEREQLSKEQHRQIITLLELVFSCCGQVPHALALYYDELANLI QKGSMDLQILAWIKDYVVQDFENDFVTDLLQIEDSTFPFPLKALYGLEDGESEGGIVVNLLPLLSQSFSTNQDVTAAESK DKRLVSPVCLSPFFRLLRLCMSELNKGNMEDIDALLVCPLYLTSLEVTEKIESLSKQEREFLCSLLFHAVNWFREVVNAF CREEEPSIKGKVLTRLQNITELQCILEKCLAVTQSLFATFPAGFPQAKSMKKLAGKVTSSFASPGYAPPLANFDSETLEA VPVLNTTSVIKKKNKGQKKLKSDSKNSFGDNSQLDENSDIIQAEAETSQQEKSSSPEKDPGTPLIQLQNYSAYFRELDLE VFTVLHCGLLTKSVLDTEMHTKTREVVQLEPTELLFLLEDLYRKMEHVLILAPAKRTPFLKGKGNKNAGFSHLCQSTSQE VIEYAAELLKPLCNHIENMHNHFQTLITENHGVIDGPGVNVQEHQLMSSCYQRLLQIFRFLFAWNGFSRHENHGLLKTSL HVLACRLKPGDRELPLEDLLSQSFQYLLNFQHSVPNIYCALSLTQLLLVIAEKSVANAKSKEIASITKGFLCQSWMQPCG TRQKGSQFNDALHTLLNIHMEYTHDILKEIEDISSTGVPELIKSSKDGYSSTYPTLTRQTFPIFFRVMITHLETSIRSIS AGKSSDSSEIQLEKLLHWNLAVRDFHILVNLVKVFDSRPVLSVCLKYGRLFIETFLKSGMPLLDYSFKKHREDVQSLLKT LQLSTRQLHHVCGHSKIHQDTGLTSHVPLLKKSLELFVYRVKAMLALNHCQEAFWVGILKNRDLQGEEILSQASQVTEAE ETEMPTLSQKDPEEEKEDSETEGRMDTNDSDEDSSD |
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