Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1827_g06741
Locus habu1_scaffold1827 : 116526 ... 118051 : +
To GenomeBrowser habu1_scaffold1827:116526..118051
Genes list of scaffold habu1_scaffold1827

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1827_g06741.t1 gi|637270701|ref|XP_003217597.2| PREDICTED: protein BRICK1 [Anolis carolinensis] 0.0
habu1_s1827_g06741.t1 gi|527255167|ref|XP_005145867.1| PREDICTED: probable protein BRICK1-like [Melopsittacus undulatus] 0.0
habu1_s1827_g06741.t1 gi|530583747|ref|XP_005285695.1| PREDICTED: protein BRICK1 [Chrysemys picta bellii] 0.0
habu1_s1827_g06741.t1 gi|657526490|ref|XP_008284280.1| PREDICTED: protein BRICK1 isoform X1 [Stegastes partitus] 0.0
habu1_s1827_g06741.t1 gi|348556638|ref|XP_003464128.1| PREDICTED: protein BRICK1 [Cavia porcellus] 1.4013e-45

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 59.8
Venom grand-1 89.5
Pit, infrared sensing 66.7
Nose 51.3
Brain-1 34.9
Eye 40.3
fetal fibroblast 117.6
venom gland-2 115.2
Brain-2 37.8
Spleen 56.5
Lung 109.0
Liver 90.6
Kidney 73.4
Pancreas 82.0
Small intestine 71.7
Large intestine 85.4
Stomach 76.9
heart 67.1
ovary 119.2
cheek muscle 64.9

Transcript
Transcript IDhabu1_s1827_g06741.t1
Definition-
>habu1_s1827_g06741.t1
gcagggttgctgccagctgactcggccatgtcgattcaggaagacccggtccagcgcgagattcaccaggactgggcgaa
ccgcgagtacatcgaattgatcaccagctccattaagaagatcgccgacttcctcaattccttcgacatgtcctgccgct
cccgtctggccacgctcaatgagaagttgacggcgctggagagacggatcgaatacatcgaggcccgggtaacaaagggt
gaaacattgacatagtgtgaagctggcaaggagtcaaccttaggggaaaaaagtgcagctgtttagaaggctgatgatca
gacttcaggtttcttcattacttaacatggatgggagttaactcatttttgccccttgggaagctgcctcctccatttgg
agactttgtgtgggtgattccagctgaaacagctaaattgtacaagagcatgtttaattatgttgttttatacaagcaaa
ttcactcagttcttgtcctattgtgtcccatgtacacgcagaactctggcttcacagcaattaaatgttgatggaacaca
atcttaa

Protein
Protein IDhabu1_s1827_g06741.t1
Definition-
>habu1_s1827_g06741.t1
MSIQEDPVQREIHQDWANREYIELITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIEARVTKGETLT

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Okinawa Institute of Science and Technology
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