Gene
| Gene Model ID | habu1_s1827_g06746 |
|---|---|
| Locus | habu1_scaffold1827 : 256656 ... 264569 : + |
| To GenomeBrowser | habu1_scaffold1827:256656..264569 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| Aminomethyltransferase, mitochondrial [Ophiophagus hannah] | EC:2.1.2.10 EC:2.6.1.0 GO:0004047 GO:0005739 GO:0006546 GO:0006563 GO:0006566 GO:0008483 GO:0032259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06746.t1 | 1 | 1 | GCV_T | 50 | 263 | 0.0 | 220.7 | 0.0 | 0.0 | 220.4 |
| habu1_s1827_g06746.t1 | 1 | 1 | GCV_T_C | 273 | 364 | 5.9e-24 | 83.9 | 1.4e-27 | 1.0e-23 | 83.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06746.t1 | gi|602644039|ref|XP_007428474.1| | PREDICTED: aminomethyltransferase, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s1827_g06746.t1 | gi|327265707|ref|XP_003217649.1| | PREDICTED: aminomethyltransferase, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06746.t1 | gi|557284476|ref|XP_006025074.1| | PREDICTED: aminomethyltransferase, mitochondrial [Alligator sinensis] | 0.0 |
| habu1_s1827_g06746.t1 | gi|564236177|ref|XP_006274998.1| | PREDICTED: aminomethyltransferase, mitochondrial [Alligator mississippiensis] | 0.0 |
| habu1_s1827_g06746.t1 | gi|612041258|ref|XP_007499913.1| | PREDICTED: aminomethyltransferase, mitochondrial isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.0 |
| Venom grand-1 | 14.8 |
| Pit, infrared sensing | 8.7 |
| Nose | 7.3 |
| Brain-1 | 3.2 |
| Eye | 6.5 |
| fetal fibroblast | 3.1 |
| venom gland-2 | 24.8 |
| Brain-2 | 3.7 |
| Spleen | 20.3 |
| Lung | 11.2 |
| Liver | 59.7 |
| Kidney | 35.8 |
| Pancreas | 71.4 |
| Small intestine | 57.0 |
| Large intestine | 17.5 |
| Stomach | 9.3 |
| heart | 11.7 |
| ovary | 4.6 |
| cheek muscle | 10.4 |
Transcript
| Transcript ID | habu1_s1827_g06746.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06746.t1 agggttcgggcctccaatctcacatcaacaggtatggaggagaacctgaaacagacccctctctatgacttccaccgaca tcatggtgggaagatggtggcctttgcaggctggagccttcctgtacaatacacacagagccacttggactcccatctcc acacacgtcaacactgttctctctttgatgtgtcccacatgctccagacaaaagtgtttggcagggacaggttgaaactt atagaaaatcttgtagttggagatattgcagagctgaagcctgatcagggcacactttctctgttcacaaatgataaagg cggcattatagatgatttgattgtgaccaacacctcagatcagcacttatatgtggtctcaaatgccggttgcatggaca aagattatgccctcatgaaggataagatgaaggaaatgaaagcagctggttatgatgtacacttggaggtgtcagacaat gctttgcttgctctgcaaggtcctgctatggcccgtgtgctgcaacctggagtggcagatgatctggctaagttaccttt catgagcagtgcgatgatggctgtatttggagtgcaaggctgtagggtgacacgctgtggctacacaggcgaggatggtg tagagatctctgtccctgcaaatcaagctgtggagctggctgagctgttgcttagggactcttctgtgtggttggctgga cttgcagctagagatagcttgcgactggaagcaggcctatgtctttatggcaatgacattgatgagaacacaacccctgt ggaggccagtctggtgtggactcttgggaagcgccgtcgtgttgccatggatttccctggtgcttcaatcattttggccc aaattaaagagaaaccgaaaaagaagcgtgtagggctgacttccacaggacctcccatccggcagcatgtgcccattctt agcccagagggcaaggcaattggtgaaattactagtggctgcccatcaccatgcctgcagaagaatattgctatgggcta tgtggacagtgaatacagcaaactgaacacagccctcaccgtagaggtgaggaagaagaactatccagctcttgtgacca aaatgccctttacacctacccattactacactataaaataggctgctgccagcagagatttttaattttacatcacattg tattaaaaggcaagagatatttgactctatgaagggtctgctactaatgacaacctgggcctagagaactgactgtatca gtctatgattgatgactgcagtgtgagatggaatacttgagatatgataagcagaaaagtaacctggttttattcctctc atctactcagtggcttcttagttgctatcatgagttatttagttcagatcatggaaatacagttgaatctaggctacatt ttgggaattggttaggcacatcggaatttgaaaagcatattctgggtagacttacaaaattggagcatggtcagcaacaa aattctaatttagcagaaggaaaactgaagaagatactctccacttttgaacacttgtcttcaggacctcgccctttgac tcacaactgatcagctatcttttttctgggtagatggacactacactgtaatccctctccatttttatactctgagaatg cctatgagcccactggaattttttaaaaataaatatcaggtagttagatacccagagataatgtcagaaggcacagggat aaatcggagcaaaaattgcaaaactacttgtgagccattttctttaagaagaggacttttataattgtttaacacatgtt ctgtgagaatatgcaggaacagtgattcaagcttaggcaaatcctcttttatttctttgcttttttcccgagctggaagc ttcagataatatcttgaaatacagctcagagcacatctatgaagttttcttggcaacaataaaatagtttgctattgtta tcttt |
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Protein
| Protein ID | habu1_s1827_g06746.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06746.t1 MEENLKQTPLYDFHRHHGGKMVAFAGWSLPVQYTQSHLDSHLHTRQHCSLFDVSHMLQTKVFGRDRLKLIENLVVGDIAE LKPDQGTLSLFTNDKGGIIDDLIVTNTSDQHLYVVSNAGCMDKDYALMKDKMKEMKAAGYDVHLEVSDNALLALQGPAMA RVLQPGVADDLAKLPFMSSAMMAVFGVQGCRVTRCGYTGEDGVEISVPANQAVELAELLLRDSSVWLAGLAARDSLRLEA GLCLYGNDIDENTTPVEASLVWTLGKRRRVAMDFPGASIILAQIKEKPKKKRVGLTSTGPPIRQHVPILSPEGKAIGEIT SGCPSPCLQKNIAMGYVDSEYSKLNTALTVEVRKKNYPALVTKMPFTPTHYYTIK |
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