Gene
| Gene Model ID | habu1_s1827_g06749 |
|---|---|
| Locus | habu1_scaffold1827 : 321219 ... 328785 : - |
| To GenomeBrowser | habu1_scaffold1827:321219..328785 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein fam212a | GO:0021915 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06749.t2 | 1 | 1 | FAM212 | 127 | 186 | 2.9e-33 | 113.2 | 4.4e-35 | 6.6e-31 | 105.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 4.0 |
| Pit, infrared sensing | 5.8 |
| Nose | 3.2 |
| Brain-1 | 0.3 |
| Eye | 2.0 |
| fetal fibroblast | 8.3 |
| venom gland-2 | 2.1 |
| Brain-2 | 0.2 |
| Spleen | 2.9 |
| Lung | 7.4 |
| Liver | 0.4 |
| Kidney | 0.6 |
| Pancreas | 0.3 |
| Small intestine | 0.8 |
| Large intestine | 3.2 |
| Stomach | 1.3 |
| heart | 3.0 |
| ovary | 9.5 |
| cheek muscle | 4.4 |
Transcript
| Transcript ID | habu1_s1827_g06749.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06749.t1 ctgagcgccccagctcgggcatgcacagcgcgcgtctcgacgccttcgtgagccacctccgcgcagaagtgctgtgcatg aaggagtcgagtgaggtgctgcgaggccagatgcagtgcatgatgcggaccctccacgatctcaagagggctcatgaccg agagctgcgactggaaccccaggagatacggctaccttctgctctgccttcctcaaagtcctgtatcagcccacggatat cagccatctcagaagcagattctgcctgttgcttggagggggctgtggaagaggaggttgctttctccccacccagcagt gagcgaagtctggagttcgattcgggctattcagaagtatctgggaacagttggcgggacgaggaaggcccacctcccct gagagccagtaagctttcctcggggggcttcctgcgccgtcgggtaccggccaggaggccccggccaaaatcagcttcag atgcctgcctggagcggtggcgggatggcgagccctcagaggcaggggactggactgtgtccctcttgtcccagagtcgt aaccggcaaccccttgtgctgggggacaactgctttgctgacttagtggagaactggatggacttgcctgaagaaagcag ggaacgggggtggctgcagcgttggctggccaagccccacggcttcttgcttaacctctcaggcaatgttcgccggaggc tggctggcatctcccgcacggagcgcaccaagcaggaccgggacggcaccaagcgtttctcttgccctgctggtcttggt gtgcgcccttcgttaccgtacttccaccagtcccacgccaacatcagcgagctttctacagactgtagcagctttgctgc cctaatgaactgccgaagtcggcagcccatcatttgcaacgatgtgattggctacatctagcttggctttttttatgctt gtttataaataaatgcctttttttctatgtcatag |
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| Transcript ID | habu1_s1827_g06749.t2 |
| Definition | - |
>habu1_s1827_g06749.t2 cgtgcggctctggctcccaactccacccctgagctgaggcagattggtgcccctcgcctaacaaggtgtctcggctctag agctggaaggagattcttggcatgtagtcggtcctggaaatccctgatgtgtgggactccttaggcactagaatatgtgg accagctgtgcatgaaggagtcgagtgaggtgctgcgaggccagatgcagtgcatgatgcggaccctccacgatctcaag agggctcatgaccgagagctgcgactggaaccccaggagatacggctaccttctgctctgccttcctcaaagtcctgtat cagcccacggatatcagccatctcagaagcagattctgcctgttgcttggagggggctgtggaagaggaggttgctttct ccccacccagcagtgagcgaagtctggagttcgattcgggctattcagaagtatctgggaacagttggcgggacgaggaa ggcccacctcccctgagagccagtaagctttcctcggggggcttcctgcgccgtcgggtaccggccaggaggccccggcc aaaatcagcttcagatgcctgcctggagcggtggcgggatggcgagccctcagaggcaggggactggactgtgtccctct tgtcccagagtcgtaaccggcaaccccttgtgctgggggacaactgctttgctgacttagtggagaactggatggacttg cctgaagaaagcagggaacgggggtggctgcagcgttggctggccaagccccacggcttcttgcttaacctctcaggcaa tgttcgccggaggctggctggcatctcccgcacggagcgcaccaagcaggaccgggacggcaccaagcgtttctcttgcc ctgctggtcttggtgtgcgcccttcgttaccgtacttccaccagtcccacgccaacatcagcgagctttctacagactgt agcagctttgctgccctaatgaactgccgaagtcggcagcccatcatttgcaacgatgtgattggctacatctagcttgg ctttttttatgcttgtttataaataaatgcctttttttctatgtcatag |
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Protein
| Protein ID | habu1_s1827_g06749.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06749.t1 MKESSEVLRGQMQCMMRTLHDLKRAHDRELRLEPQEIRLPSALPSSKSCISPRISAISEADSACCLEGAVEEEVAFSPPS SERSLEFDSGYSEVSGNSWRDEEGPPPLRASKLSSGGFLRRRVPARRPRPKSASDACLERWRDGEPSEAGDWTVSLLSQS RNRQPLVLGDNCFADLVENWMDLPEESRERGWLQRWLAKPHGFLLNLSGNVRRRLAGISRTERTKQDRDGTKRFSCPAGL GVRPSLPYFHQSHANISELSTDCSSFAALMNCRSRQPIICNDVIGYI |
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| Protein ID | habu1_s1827_g06749.t2 |
| Definition | - |
>habu1_s1827_g06749.t2 MKESSEVLRGQMQCMMRTLHDLKRAHDRELRLEPQEIRLPSALPSSKSCISPRISAISEADSACCLEGAVEEEVAFSPPS SERSLEFDSGYSEVSGNSWRDEEGPPPLRASKLSSGGFLRRRVPARRPRPKSASDACLERWRDGEPSEAGDWTVSLLSQS RNRQPLVLGDNCFADLVENWMDLPEESRERGWLQRWLAKPHGFLLNLSGNVRRRLAGISRTERTKQDRDGTKRFSCPAGL GVRPSLPYFHQSHANISELSTDCSSFAALMNCRSRQPIICNDVIGYI |
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