Gene
| Gene Model ID | habu1_s1827_g06754 |
|---|---|
| Locus | habu1_scaffold1827 : 570968 ... 584901 : - |
| To GenomeBrowser | habu1_scaffold1827:570968..584901 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| early growth response protein 1 | GO:0003700 GO:0005667 GO:0006357 GO:0007166 GO:0010033 GO:0043565 GO:0044212 GO:0045449 GO:0045893 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06754.t1 | 1 | 1 | DUF3446 | 113 | 202 | 5.7e-23 | 80.9 | 4.6e-26 | 5.7e-23 | 80.9 |
| habu1_s1827_g06754.t1 | 3 | 1 | zf-C2H2 | 334 | 358 | 2.8e-15 | 55.6 | 1.2e-08 | 1.5e-05 | 25.0 |
| habu1_s1827_g06754.t1 | 3 | 1 | zf-C2H2_4 | 334 | 358 | 1.9e-13 | 49.6 | 2.5e-07 | 0.00031 | 20.8 |
| habu1_s1827_g06754.t1 | 2 | 1 | zf-H2C2_2 | 351 | 374 | 1.7e-18 | 65.9 | 9.2e-11 | 1.1e-07 | 31.7 |
| habu1_s1827_g06754.t1 | 3 | 2 | zf-C2H2 | 364 | 386 | 2.8e-15 | 55.6 | 4.6e-07 | 0.00057 | 20.0 |
| habu1_s1827_g06754.t1 | 3 | 2 | zf-C2H2_4 | 364 | 386 | 1.9e-13 | 49.6 | 1.3e-06 | 0.0016 | 18.6 |
| habu1_s1827_g06754.t1 | 2 | 2 | zf-H2C2_2 | 378 | 402 | 1.7e-18 | 65.9 | 6.0e-12 | 7.4e-09 | 35.4 |
| habu1_s1827_g06754.t1 | 3 | 3 | zf-C2H2 | 392 | 414 | 2.8e-15 | 55.6 | 2.1e-06 | 0.0026 | 17.9 |
| habu1_s1827_g06754.t1 | 3 | 3 | zf-C2H2_4 | 392 | 410 | 1.9e-13 | 49.6 | 3.8e-06 | 0.0046 | 17.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06754.t1 | gi|602668602|ref|XP_007439847.1| | PREDICTED: early growth response protein 1-like [Python bivittatus] | 0.0 |
| habu1_s1827_g06754.t1 | gi|543360250|ref|XP_005523784.1| | PREDICTED: early growth response protein 1 [Pseudopodoces humilis] | 0.0 |
| habu1_s1827_g06754.t1 | gi|525029088|ref|XP_005061952.1| | PREDICTED: early growth response protein 1 [Ficedula albicollis] | 0.0 |
| habu1_s1827_g06754.t1 | gi|542169159|ref|XP_005493135.1| | PREDICTED: early growth response protein 1 [Zonotrichia albicollis] | 0.0 |
| habu1_s1827_g06754.t1 | gi|699670588|ref|XP_009900593.1| | PREDICTED: early growth response protein 1 isoform X1 [Picoides pubescens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 1.0 |
| Pit, infrared sensing | 8.3 |
| Nose | 4.5 |
| Brain-1 | 10.6 |
| Eye | 2.2 |
| fetal fibroblast | 13.8 |
| venom gland-2 | 0.7 |
| Brain-2 | 2.6 |
| Spleen | 4.9 |
| Lung | 3.2 |
| Liver | 0.9 |
| Kidney | 0.5 |
| Pancreas | 0.2 |
| Small intestine | 0.7 |
| Large intestine | 5.5 |
| Stomach | 0.4 |
| heart | 1.2 |
| ovary | 1.6 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s1827_g06754.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06754.t1 gtgtagccccgggcaaagcccaagaacacccccatggccgcagccaaggccgagatgcagctcctgccctcgctgcagat ggccgaccctttcggacccttcccgcactcgccccctactatggacaccaactaccccaagctagaggagatcatgttgc tcgccggtggggggccacagttcctcaatcccgtcggtggccccgagagcggcggcggcggcttcaatcactccggcgac ggtggggagcactccttcgaccacctccctgcagacacttttcccgagatctctctgaacggcgagaaacctttagcaga gaccagctatccgacccaaactacccgcctcccgcccatcacctacaccggccgcttctctctggagccggcgtcgagcg gcggcggaggcagcaccccgttgtggccggagcctctcttcagcctggtgagcggcctggtgggtatggctaaccccccg actacgtcggcccagtcttcctccgcctcttcgcccatcgccagctccgcttctcccagcccggctttgagctgctcggt gcaggccagcgaccccagccccatctactcagcggcgcccaccttccccagccccggcggggctgacgtcttcccagagc agaccagccagccgtttcccagcccgtcgggagcctcactacagtttccgcctccggcatacccgacggccaagagcggc ttccagctgcccatcattccggactacttattcccgcctcagccgccaccgcagccgggcgacctgggcctgggctcggt ggagcaaaagcccttcccgggcccgcagccctcgctcactccgctctccaccatcaaggccttcgctacccagagtggcg gcggcagctgcggcaccggcaccggcaccggcactccgcaggaggccaagagcctgccaaacggcggctcctaccaggcg cagctggtcaagcccagccgcatgaggaagtatcccaaccggcccagcaagaccccgccgcacgagcggccctacgcttg ccccgtcgagtcctgcgaccgccgcttctcgcgctccgacgagctcacccgccacatccgcatccacaccggccagaagc ctttccagtgccgcatctgcatgcgcaacttcagccggagcgaccacctcaccacacacattcgcactcacacaggcgag aagcccttcgcctgcgacatctgcggccgcaaattcgcccgcagcgacgagaggaagcgccacaccaagatccacctccg gcagaaggacaagaaggccgacaagggaccccccgggccccaggcaccctcgacgtcctcccctctggccccttactcgg cctcgacctgctctacctcgggagttgactaattcatgctgaaaagtgaaggtatatgtttaattgtgaatgaaggggca aacaggtgtatcagaaagtatgaaacggtgtcacataggatgcatatgaaaattgggattcataggttgatgatagttat gtgtttatgaatgaagataatgaaacaaataaaaggattttgcggtaaaactaat |
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Protein
| Protein ID | habu1_s1827_g06754.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06754.t1 MAAAKAEMQLLPSLQMADPFGPFPHSPPTMDTNYPKLEEIMLLAGGGPQFLNPVGGPESGGGGFNHSGDGGEHSFDHLPA DTFPEISLNGEKPLAETSYPTQTTRLPPITYTGRFSLEPASSGGGGSTPLWPEPLFSLVSGLVGMANPPTTSAQSSSASS PIASSASPSPALSCSVQASDPSPIYSAAPTFPSPGGADVFPEQTSQPFPSPSGASLQFPPPAYPTAKSGFQLPIIPDYLF PPQPPPQPGDLGLGSVEQKPFPGPQPSLTPLSTIKAFATQSGGGSCGTGTGTGTPQEAKSLPNGGSYQAQLVKPSRMRKY PNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK FARSDERKRHTKIHLRQKDKKADKGPPGPQAPSTSSPLAPYSASTCSTSGVD |
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