Gene
| Gene Model ID | habu1_s1827_g06759 |
|---|---|
| Locus | habu1_scaffold1827 : 739458 ... 754521 : - |
| To GenomeBrowser | habu1_scaffold1827:739458..754521 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| c-terminal-binding protein 2-like | EC:1.1.1.0 GO:0016616 GO:0051287 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06759.t1 | 1 | 1 | 2-Hacid_dh | 41 | 349 | 1.9e-26 | 92.1 | 4.6e-30 | 2.3e-26 | 91.8 |
| habu1_s1827_g06759.t1 | 1 | 1 | 2-Hacid_dh_C | 137 | 320 | 0.0 | 194.3 | 0.0 | 0.0 | 193.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06759.t1 | gi|602626899|ref|XP_007420401.1| | PREDICTED: C-terminal-binding protein 2-like [Python bivittatus] | 0.0 |
| habu1_s1827_g06759.t1 | gi|327265593|ref|XP_003217592.1| | PREDICTED: C-terminal-binding protein 2-like [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06759.t1 | gi|591381001|ref|XP_007065038.1| | PREDICTED: C-terminal-binding protein 2-like [Chelonia mydas] | 0.0 |
| habu1_s1827_g06759.t1 | gi|154816153|ref|NP_001025795.1| | C-terminal binding protein-like [Gallus gallus] | 0.0 |
| habu1_s1827_g06759.t1 | gi|530576639|ref|XP_005282288.1| | PREDICTED: C-terminal-binding protein 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.8 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 3.4 |
| Nose | 2.8 |
| Brain-1 | 3.2 |
| Eye | 3.9 |
| fetal fibroblast | 11.4 |
| venom gland-2 | 4.9 |
| Brain-2 | 2.6 |
| Spleen | 3.9 |
| Lung | 2.8 |
| Liver | 3.1 |
| Kidney | 3.8 |
| Pancreas | 3.1 |
| Small intestine | 4.3 |
| Large intestine | 3.2 |
| Stomach | 3.1 |
| heart | 5.6 |
| ovary | 4.6 |
| cheek muscle | 30.8 |
Transcript
| Transcript ID | habu1_s1827_g06759.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06759.t1 agccagtcaggcttcagcttccgtagctctctcgctttctcccgcctccctcgccctctcctgctcagagtcgcccgggc ccatttcggtgtgtcccatggacaggcacaaagtgaagcgccagaggctggaccgcatttgcgaaggtataaggcctcct attggtaatggtccaatgccagctcgtccattggttgccctccttgatggcagggattgcactgtagaaatgcctatcct gaaagatgttgccacagtggctttctgtgatgcacaatcaactcaggaaatccatgaaaaggttctaaatgaagctgttg gggctctgatgtaccacaccattaccttgtcgcgccaggacctggagaagttcaaagctctccgggtcattgtgcgaatt ggcagtggctatgacaatgtggatatcaagtcagctgcagaattaggcattgcagtatgcaatatcccttcatcttctgt agaagaaacagctgattctaccctctgtcacatcctaaacctttatcgtcgggttacatggcttcaccaagccatgcggg aaggaaacagagcctcgagtatggagcaaatcagagaggtggctggtggggctgtacgtatccgtggtgagaccttgggc atcattggccttggccgaattgggcaagcagttgccttacgtgcaaaaccctttggtttcaacgttattttttatgatcc ttatttgcctgatggagtggagcgttccttgggattacagcggatggccaccttgcaagacctcctaatgcatagtgatt gcatcacattgcactgtagtctaaatgagcataatcatcatctcatcaatgacttcaccattaaacagatgcgtcagggc tgctttctggtgaatacggcgcgtggaggtctgattgaagagaaggccctggctcaagccctaaaggaagggaggatcag aggggctgctcttgatgtgcatgagtcagaacctttcagttttgctaatgggcccctaaaagatgctcccaatgtgattt gtactcctcacacagcctggtacagtgaacaggcttctattgagtcgagagaggatgcggctaaggagatccgaagagcc atcacaggtcacatacctgatggtttgaggaactgtgttaacaaggaatacttgcttttagcggctcagtggtctggcat tgatcctgcagctgtacattcagagcttaatggagctacagcttacaggtttcctccaggagtagtaggagtagccagct ctgggctaccggagccaccagttgagggaattgtagctcacagcattccctctgtgtctcactctgcaccacacactcct tctccaggagagtcaagcaaattggagccagacagagaaatctccactgaccagtagcacctctcttatcttattcagcc cttaacataaaacagggaaagtctcctgttttt |
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Protein
| Protein ID | habu1_s1827_g06759.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06759.t1 MDRHKVKRQRLDRICEGIRPPIGNGPMPARPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYH TITLSRQDLEKFKALRVIVRIGSGYDNVDIKSAAELGIAVCNIPSSSVEETADSTLCHILNLYRRVTWLHQAMREGNRAS SMEQIREVAGGAVRIRGETLGIIGLGRIGQAVALRAKPFGFNVIFYDPYLPDGVERSLGLQRMATLQDLLMHSDCITLHC SLNEHNHHLINDFTIKQMRQGCFLVNTARGGLIEEKALAQALKEGRIRGAALDVHESEPFSFANGPLKDAPNVICTPHTA WYSEQASIESREDAAKEIRRAITGHIPDGLRNCVNKEYLLLAAQWSGIDPAAVHSELNGATAYRFPPGVVGVASSGLPEP PVEGIVAHSIPSVSHSAPHTPSPGESSKLEPDREISTDQ |
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