Gene
| Gene Model ID | habu1_s1827_g06761 |
|---|---|
| Locus | habu1_scaffold1827 : 775102 ... 783201 : - |
| To GenomeBrowser | habu1_scaffold1827:775102..783201 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| oocyte-specific histone rna stem-loop-binding protein 2-like isoform x2 | GO:0005634 GO:0030529 GO:0044260 GO:0044822 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06761.t3 | 1 | 1 | SLBP_RNA_bind | 53 | 89 | 9.6e-12 | 44.5 | 6.5e-16 | 9.6e-12 | 44.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 1.8 |
| Nose | 3.4 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.2 |
| Spleen | 0.1 |
| Lung | 2.6 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.6 |
| heart | 0.0 |
| ovary | 27.3 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s1827_g06761.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06761.t1 atgcggaccatgaggtttttggaggggcgcttcggtttgagggccagtcatggaatttccgaattctttggcggacttct cgactgccgtaactggccggtcatcatttcatgttttctcacctggagtgaagatggtgagtgtgggggtaggtacaagg tcagattgggtaagaaaatccagtccgggatctggaacttatatagagacagatgaggctgtcttgcgaagaaggcaaaa gcagatagattatgggaaaaataccattggttaccagcactttgtccaacaagttcccaggatggctcgccaatcaggca ggagctggtgaccaaaatggatcttttgtctaatgtcccaaacgactggtttgatgctcagtgtattcaggaaaatattt gtaaagaagtcctaggagaacagatttctggattgtcatcttctggccatttttatccgctgcttcaggatactccctcc aacagggaatatttcaaggaagacgttgaagactgtccatttgactcctggctcttattttgttctcataggatcccggc acagtctaaagatctaaaggagaacaattagagctaatttcaaggagctatttttgccactgtggcccacttgtattgtc actcagtttgctacaaaatccataattttgttaacaagatgatcttccatttctatatttgatagtgttctatatagagt aatcattatttggctagaacacaaagcatttcctgttgtctctccatatttctattataagtgtacattataaagcaatt gatgactgctattaaactaaagcattgtggcttgttggttgcagtaaggaaattgagaatcaaagttctgaaatatgtac aggtaactaaattgctctgagctcatgttctatcactagatttgttattggttaattccagtctgtttgacatatgcact gtgattggataaaataatatgttttgtatttgattcttaattggcatcatttatttgcttgaatgtgaatgttacacttg tatgatgaagcatcttgcatcttgggtaaaaatgcttttgttaaatctgaataagtgtgccctatgtaggaatattcaga cagcttgtcttccagaaattctgtaacagcaacagacagcaacaagcaacagaatcattggaatatctttgcctgagcat aaactattgaatttcatttggttat |
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| Transcript ID | habu1_s1827_g06761.t2 |
| Definition | - |
>habu1_s1827_g06761.t2 atgcggaccatgaggtttttggaggggcgcttcggtttgagggccagtcatggaatttccgaattctttggcggacttct cgactgccgtaactggccggtcatcatttcatgttttctcacctggagtgaagatggtgagtgtgggggtaggtacaagg tcagattgggtaagaaaatccagtccgggatctggaacttatatagagacagatgaggctgtcttgcgaagaaggcaaaa gcagatagattatgggaaaaataccattggttaccagcactttgtccaacaagttcccaggatggctcgccaatcagagg ctgggagtattttgcactatgttaaggtggaaaatgagaagggtcacatatataaggaaagaaggaagaagcaggagctg gtgaccaaaatggatcttttgtctaatgtcccaaacgactggtttgatgctcagtgtattcaggaaaatatttgtaaaga agtcctaggagaacagatttctggattgtcatcttctggccatttttatccgctgcttcaggatactccctccaacaggg aatatttcaaggaagacgttgaagactgtccatttgactcctggctcttattttgttctcataggatcccggcacagtct aaagatctaaaggagaacaattagagctaatttcaaggagctatttttgccactgtggcccacttgtattgtcactcagt ttgctacaaaatccataattttgttaacaagatgatcttccatttctatatttgatagtgttctatatagagtaatcatt atttggctagaacacaaagcatttcctgttgtctctccatatttctattataagtgtacattataaagcaattgatgact gctattaaactaaagcattgtggcttgttggttgcagtaaggaaattgagaatcaaagttctgaaatatgtacaggtaac taaattgctctgagctcatgttctatcactagatttgttattggttaattccagtctgtttgacatatgcactgtgattg gataaaataatatgttttgtatttgattcttaattggcatcatttatttgcttgaatgtgaatgttacacttgtatgatg aagcatcttgcatcttgggtaaaaatgcttttgttaaatctgaataagtgtgccctatgtaggaatattcagacagcttg tcttccagaaattctgtaacagcaacagacagcaacaagcaacagaatcattggaatatctttgcctgagcataaactat tgaatttcatttggttat |
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| Transcript ID | habu1_s1827_g06761.t3 |
| Definition | - |
>habu1_s1827_g06761.t3 atgcggaccatgaggtttttggaggggcgcttcggtttgagggccagtcatggaatttccgaattctttggcggacttct cgactgccgtaactggccggtcatcatttcatgttttctcacctggagtgaagatggtgagtgtgggggtaggtacaagg tcagattgggtaagaaaatccagtccgggatctggaacttatatagagacagatgaggctgtcttgcgaagaaggcaaaa gcagatagattatgggaaaaataccattggttaccagcactttgtccaacaagttcccaggatggctcgccaatcagagg ctgggagtattttgcactatgttaaggtggaaaatgagaagggtcacatatataaggaaagaaggaagaagcaggagctg gtgaccaaaatggatcttttgtctaatgtcccaaacgactggtttgatgctcagtgtattcaggaaaatatttgtaaaga agtcctaggagaacagatttctggattgtcatcttctggccatttttatccgctgcttcaggatactccctccaacaggg aatatttcaaggaagacgttgaagactgtccatttgactcctggctcttattttgttctcataggatcccggcacagtct aaagatctaaaggagaacaattagagctaatttcaaggagctatttttgccactgtggcccacttgtattgtcactcagt ttgctacaaaatccataattttgttaacaagatgatcttccatttctatatttgatagtgttctatatagagtaatcatt atttggctagaacacaaagcatttcctgttgtctctccatatttctattataagtgtacattataaagcaattgatgact gctattaaactaaagcattgtggcttgttgg |
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Protein
| Protein ID | habu1_s1827_g06761.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06761.t1 MEFPNSLADFSTAVTGRSSFHVFSPGVKMVSVGVGTRSDWVRKSSPGSGTYIETDEAVLRRRQKQIDYGKNTIGYQHFVQ QVPRMARQSGRSW |
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| Protein ID | habu1_s1827_g06761.t2 |
| Definition | - |
>habu1_s1827_g06761.t2 MEFPNSLADFSTAVTGRSSFHVFSPGVKMVSVGVGTRSDWVRKSSPGSGTYIETDEAVLRRRQKQIDYGKNTIGYQHFVQ QVPRMARQSEAGSILHYVKVENEKGHIYKERRKKQELVTKMDLLSNVPNDWFDAQCIQENICKEVLGEQISGLSSSGHFY PLLQDTPSNREYFKEDVEDCPFDSWLLFCSHRIPAQSKDLKENN |
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| Protein ID | habu1_s1827_g06761.t3 |
| Definition | - |
>habu1_s1827_g06761.t3 MEFPNSLADFSTAVTGRSSFHVFSPGVKMVSVGVGTRSDWVRKSSPGSGTYIETDEAVLRRRQKQIDYGKNTIGYQHFVQ QVPRMARQSEAGSILHYVKVENEKGHIYKERRKKQELVTKMDLLSNVPNDWFDAQCIQENICKEVLGEQISGLSSSGHFY PLLQDTPSNREYFKEDVEDCPFDSWLLFCSHRIPAQSKDLKENN |
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