Gene
| Gene Model ID | habu1_s1827_g06762 |
|---|---|
| Locus | habu1_scaffold1827 : 783452 ... 843353 : + |
| To GenomeBrowser | habu1_scaffold1827:783452..843353 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| m-phase inducer phosphatase 1-b-like | GO:0005622 GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06762.t1 | 1 | 1 | M-inducer_phosp | 87 | 232 | 5.5e-22 | 78.0 | 3.2e-25 | 1.6e-21 | 76.5 |
| habu1_s1827_g06762.t1 | 1 | 1 | Rhodanese | 280 | 383 | 7.8e-12 | 45.5 | 4.3e-15 | 2.1e-11 | 44.1 |
| habu1_s1827_g06762.t1 | 3 | 1 | GDNF | 436 | 517 | 2.7e-25 | 88.6 | 6.2e-08 | 0.00031 | 21.2 |
| habu1_s1827_g06762.t1 | 3 | 2 | GDNF | 532 | 608 | 2.7e-25 | 88.6 | 7.1e-11 | 3.5e-07 | 30.6 |
| habu1_s1827_g06762.t1 | 3 | 3 | GDNF | 618 | 712 | 2.7e-25 | 88.6 | 8.2e-19 | 4.1e-15 | 56.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06762.t1 | gi|602626919|ref|XP_007420411.1| | PREDICTED: M-phase inducer phosphatase 1-B-like [Python bivittatus] | 0.0 |
| habu1_s1827_g06762.t1 | gi|602626893|ref|XP_007420398.1| | PREDICTED: GDNF family receptor alpha-4-like [Python bivittatus] | 0.0 |
| habu1_s1827_g06762.t1 | gi|637270564|ref|XP_008103204.1| | PREDICTED: M-phase inducer phosphatase 3 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06762.t1 | gi|530576745|ref|XP_005282339.1| | PREDICTED: LOW QUALITY PROTEIN: M-phase inducer phosphatase 3 [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06762.t1 | gi|591381027|ref|XP_007065051.1| | PREDICTED: M-phase inducer phosphatase 1-B-like, partial [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 12.5 |
| Pit, infrared sensing | 5.2 |
| Nose | 3.6 |
| Brain-1 | 1.7 |
| Eye | 4.1 |
| fetal fibroblast | 4.2 |
| venom gland-2 | 4.8 |
| Brain-2 | 2.9 |
| Spleen | 2.9 |
| Lung | 21.3 |
| Liver | 1.0 |
| Kidney | 1.4 |
| Pancreas | 0.1 |
| Small intestine | 0.4 |
| Large intestine | 2.5 |
| Stomach | 0.8 |
| heart | 4.1 |
| ovary | 11.5 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s1827_g06762.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06762.t1 cgtcggtttgccaattaaaaaggtgttgactccgagactggggctcttctccgctcgagccttcgttggttggttggtaa agataaagaggcatggcacagaaatggaatggctggaaagggaccttggtggtcttctaggatacaccaagatgctgctt agatctgtccaatctcagcagcggagaagagaaaattgctttcaccttcagtcagtctccaggagcactggaaactgatg aaaataacttaacagaattccaggatcaactagactcaaggaagcagtgtgtgcagttcctccagcctgaggtattgtgc agcacaccaagttacctccagcaaattagcagggaaattcagtgcccttcgatgaacaagagaaataaagcagaggattt aatggactgtgagatgaaatatcttggcagcccaatggatgcttcaggaatcccagaagccttggacagcttttctgagc tctgttccagtgaaaaggaagaaacagagaaatccttttctgggcatcactgtagcatagctgacttgttgtctggacca ctccttgctcaggacagcaatatcagtgaggtctccatgaacaagagccgcctcttccgatctccatctctgccagaaaa actaaacaagcctgcatcaaagaggacagtgagaagctatgatgatgaaactccaactaaggtgaaatggaagagcagcc caatccaagaagggccagatggggttgtgcttttgaagaaaacagtgtccctttctgacatcgagattgtcagagccctt gatcaagaccatggcttcaggcagttaattggtgatttctctggcgtgtatgcattgccaacagtcacaggaaggcattc ggatctgagatatatcactgcggatactatggtagcgctgctccacaatcaatttcaaagccttatagagaagttctata ttgttgactgccgctatccctatgaatatcatgggggccacatcaagggggccttgaatagccacaggcaagatgactta tttgaacttttcctgaggaagcctctgcttccatcatcaccacagaagcgcctcatccttgtattccattgtgaattttc ttctgaaaggggtcccaagatgtgtcgttacctgagagaggaagaccgagccatgaatgaatatcctgccctgcactatc ctgaactttatgttctccaaggtggctacaaggagttctttctagaaaacaagatctttgtattttttattttctccagc tctttctcttctgttctgctgtctccagtcggtaaatttggggctgcgggattgccttccctcgtccccttcacgcacgg aggagtccaggttatgtcctttgagcagccaaacaactgtgtagcagctgagaccctttgtctagctgagccttcctgca gtgccacctatcagatcctgcagaactgttcccagcatctttctaagaacagttacatcttcctgtaccaagaagccaac aacagatgcacagaggcacaaataaaaatgagaaatggccattttcagcactgcaaatgtcaccgacgtgcacagaagaa ggaagagcggtgcttgcaaatctaccgggctcttcattcaactttaacacaaggttcccctagagccaaagatagcccaa attcctgcctgcttgctgctaatatctgccaaatggaccacaaatgcacgcgtcaccgctcacactacgctcaggcctgc agcccaggatacccctgtgaccaacacaaatgccaccaaagtctgagacacttctttgagaaggttaatgcggatttcac caagaggctcctgttttgtccttgccaagatgaagcttgtggggaacgacgctggaaaaccattgtcccagaatgttctt tcctcagcagcagcaagcacaattgcctcttcttgatggatacctgcctcaaggataaagtctgcagatcccggctgact gatttccaagaaaaatgcaaatcgttacagacattcacagatggctgctctccatcgaattatgcagcatgtctgcaagc ttacatgaagttgattggtacatctttgacccccaattatgtgagcaattccagtactgagatcacactttggtgctcct gcaaaaacagtggcaatcataaagaggactgtgatcaaatccttaacttattttccagcaacaaatgtctctataatgca atccaagctcagatgaatcttggccaaaataatgaggaggtgcaggaccagccacaattcaccccttccttagacattca tggcaccagcacaatgttcactgaaaaactgtatcaggaacctaaggtgaagcaggagaagaaagattcagacattctta ccctcaaccaaaaattacccccaaattctgaataccccagagctgggttttcctcactcatcttggtcttaaccttagtc ttcttatttcttggcccaccttaatctcacctgaatttcattgctactattgtatatttccttgagaaggggaaactgac ttgtttcatgcagagaggaaacattggtcactctacatttgtttccccttctatcagcacagtggccctttgactcattt ttgtacacggttgcaatagaagccagagggagatgatggggagttcagattccccctcccccgtggagaaaaaagcaagc agataggagattctagggaactattttttaaaatctaaatcagggtaaagttttcatattccaagatatcctgctttaag aagacaaagaagaactggtagtctctaaaatgatgtgcaatttctggccaaaggagcaccccaacatctggattgttttc aggactatattgtagaattgtctttttttttttaatcagccaaagcaaaaatattacattaagggcatgatactaaactg tagcctccgtacatggtttcttgtttgcccaactaatcttaatgtgttaactgttcaggggaaatttaattcacttgagc caagatggatttatgtatttttttcaataaaatggttcttagcaacagctaca |
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Protein
| Protein ID | habu1_s1827_g06762.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06762.t1 MAQKWNGWKGTLVVFXDTPRCCLDLSNLSSGEEKIAFTFSQSPGALETDENNLTEFQDQLDSRKQCVQFLQPEVLCSTPS YLQQISREIQCPSMNKRNKAEDLMDCEMKYLGSPMDASGIPEALDSFSELCSSEKEETEKSFSGHHCSIADLLSGPLLAQ DSNISEVSMNKSRLFRSPSLPEKLNKPASKRTVRSYDDETPTKVKWKSSPIQEGPDGVVLLKKTVSLSDIEIVRALDQDH GFRQLIGDFSGVYALPTVTGRHSDLRYITADTMVALLHNQFQSLIEKFYIVDCRYPYEYHGGHIKGALNSHRQDDLFELF LRKPLLPSSPQKRLILVFHCEFSSERGPKMCRYLREEDRAMNEYPALHYPELYVLQGGYKEFFLENKIFVFFIFSSSFSS VLLSPVGKFGAAGLPSLVPFTHGGVQVMSFEQPNNCVAAETLCLAEPSCSATYQILQNCSQHLSKNSYIFLYQEANNRCT EAQIKMRNGHFQHCKCHRRAQKKEERCLQIYRALHSTLTQGSPRAKDSPNSCLLAANICQMDHKCTRHRSHYAQACSPGY PCDQHKCHQSLRHFFEKVNADFTKRLLFCPCQDEACGERRWKTIVPECSFLSSSKHNCLFLMDTCLKDKVCRSRLTDFQE KCKSLQTFTDGCSPSNYAACLQAYMKLIGTSLTPNYVSNSSTEITLWCSCKNSGNHKEDCDQILNLFSSNKCLYNAIQAQ MNLGQNNEEVQDQPQFTPSLDIHGTSTMFTEKLYQEPKVKQEKKDSDILTLNQKLPPNSEYPRAGFSSLILVLTLVFLFL GPP |
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