Gene
| Gene Model ID | habu1_s1827_g06765 |
|---|---|
| Locus | habu1_scaffold1827 : 944034 ... 954805 : - |
| To GenomeBrowser | habu1_scaffold1827:944034..954805 |
| Genes list of scaffold | habu1_scaffold1827 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06765.t3 | 1 | 1 | Bromodomain | 339 | 412 | 4.2e-22 | 77.8 | 5.2e-26 | 7.8e-22 | 77.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06765.t3 | gi|755690338|ref|XP_011280579.1| | PREDICTED: bromodomain-containing protein 8 isoform X2 [Felis catus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.4 |
| Brain-1 | 0.3 |
| Eye | 0.4 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.3 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.2 |
| Stomach | 0.3 |
| heart | 0.4 |
| ovary | 10.9 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s1827_g06765.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06765.t1 ccgggccgcacaaacaagcaaagccccatccgtgggatgcaggcagcacacaaaaccacgcactctccggtccatggaaa aacctttctccagatgggtcatgtgtggacctggctggaatccaaagaagaatacttcactgaatctgagaaaagcagct gctgcaaatctctctgtagttctccagactctagcttagactttgacctaaaggaactgagcagctggagggaaactgaa gatgatgttcaggaggagttagaagagagcagcagccaggaggcggtgacatatttaatggagcccgtttgtgttagcag cccttacttggcacagggacctcaggttttctctggtgccggagagcagaagggaaggcttgccacagctcacaaaggtg acaccaaaggatcacttgtagacaaagaggaagaattggggcaggaaagtcattcagagatttttaaaaagcaagctaag gagagatcagcttcccagagaaggagaaattgggcactgcaggtcttggaagggctgccggtcgtgaacttggaagcgga ggccatggaaggacttcctagtctgtgtgaggagcctgaatgctctaagtttcaggatagagagtttgatgaggattccg gaaagaaagtcatgcactgtctgatgtccggtacggcagaaactgatgtggacgaggcctcaacttcagaacttatgaag caaacgccttgtgaatggaaaatagagaagaaagagatgccaccaactagaatggagggggctgtggaaaacactgaaga tcaaactgaagaatggaaagacaatgatttccatttgagttatagcaatgacgactccagtccttatggaacacccttaa taagctctccttccacaagtacagcctccctgcctttggtgcatttgagccaagacgatccacttcaacagcatttgctc tttaagaaaactctgttatctatttggaagatggttgctggccatagatacagcggtcccttcctgaagccggtttcaga gaagcaggctcctggttacaaagatgtggtcaaaagaccaatggatctttcctccataaagagaaacctgtccaaaggcc acattcagcacatggtccagttccaacgcgatctcatgctgatgttccagaatgccatcatgtacaataactctaaccac cacatccatcacattgctgtggagatgcagcaggaagtcctggagcaactccaaatgttgggtgctgatgaagaagtgaa aaaggcaggtgcatgtttagaagttaagagttcaaccctgtttcctgaaatcttgttcataaggaaaaagttgtttgttt actaatttagcactgcctgacacctcactttcttttcttaagattcttcatgatagaatgtgtgtcctattttgttcatt gggagacttgtttaatatctggaaattcactgttttttttagacaataaaagtactatattgtgtttctttt |
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| Transcript ID | habu1_s1827_g06765.t2 |
| Definition | - |
>habu1_s1827_g06765.t2 ccgggccgcacaaacaagcaaagccccatccgtgggatgcaggcagcacacaaaaccacgcactctccggtccatggaaa aacctttctccagatgggtcatgtgtggacctggctggaatccaaagaagaatacttcactgaatctgagaaaagcagct gctgcaaatctctctgtagttctccagactctagcttagactttgacctaaaggaactgagcagctggagggaaactgaa gatgatgttcaggaggagttagaagagagcagcagccaggaggcggtgagccagccggaaaccggtgactccacggcatg ggaatatgctaatgaaggagagcaagatgagagtgggaaatgcaagcaggatgccctcttgaggtttctgtctgaggtga catatttaatggagcccgtttgtgttagcagcccttacttggcacagggacctcaggttttctctggtgccggagagcag aagggaaggcttgccacagctcacaaaggtgacaccaaaggatcacttgtagacaaagaggaagaattggggcaggaaag tcattcagagatttttaaaaagcaagctaaggagagatcagcttcccagagaaggagaaattgggcactgcaggtcttgg aagggctgccggtcgtgaacttggaagcggaggccatggaaggacttcctagtctgtgtgaggagcctgaatgctctaag tttcaggatagagagtttgatgaggattccggaaagaaagtcatgcactgtctgatgtccggtacggcagaaactgatgt ggacgaggcctcaacttcagaacttatgaagcaaacgccttgtgaatggaaaatagagaagaaagagatgccaccaacta gaatggagggggctgtggaaaacactgaagatcaaactgaagaatggaaagacaatgatttccatttgagttatagcaat gacgactccagtccttatggaacacccttaataagctctccttccacaagtacagcctccctgcctttggtgcatttgag ccaagacgatccacttcaacagcatttgctctttaagaaaactctgttatctatttggaagatggttgctggccatagat acagcggtcccttcctgaagccggtttcagagaagcaggctcctggttacaaagatgtggtcaaaagaccaatggatctt tcctccataaagagaaacctgtccaaaggccacattcagcacatggtccagttccaacgcgatctcatgctgatgttcca gaatgccatcatgtacaataactctaaccaccacatccatcacattgctgtggagatgcagcaggaagtcctggagcaac tccaaatgttgggtgctgatgaagaagtgaaaaaggcaggtgcatgtttagaagttaagagttcaaccctgtttcctgaa atcttgttcataaggaaaaagttgtttgtttactaatttagcactgcctgacacctcactttcttttcttaagattcttc atgatagaatgtgtgtcctattttgttcattgggagacttgtttaatatctggaaattcactgttttttttagacaataa aagtactatattgtgtttctttt |
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| Transcript ID | habu1_s1827_g06765.t3 |
| Definition | - |
>habu1_s1827_g06765.t3 ccgggccgcacaaacaagcaaagccccatccgtgggatgcaggcagcacacaaaaccacgcactctccggtccatggaaa aacctttctccagatgggtcatgtgtggacctggctggaatccaaagaagaatacttcactgaatctgagaaaagcagct gctgcaaatctctctgtagttctccagactctagcttagactttgacctaaaggaactgagcagctggagggaaactgaa gatgatgttcaggaggagttagaagagagcagcagccaggaggcggtgagccagccggaaaccggtgactccacggcatg ggaatatgctaatgaaggagagcaagatgagagtgggaaatgcaagcaggatgccctcttgaggtttctgtctgaggtga catatttaatggagcccgtttgtgttagcagcccttacttggcacagggacctcaggttttctctggtgccggagagcag aagggaaggcttgccacagctcacaaaggtgacaccaaaggatcacttgtagacaaagaggaagaattggggcaggaaag tcattcagagatttttaaaaagcaagctaaggagagatcagcttcccagagaaggagaaattgggcactgcaggtcttgg aagggctgccggtcgtgaacttggaagcggaggccatggaaggacttcctagtctgtgtgaggagcctgaatgctctaag tttcaggatagagagtttgatgaggattccggaaagaaagtcatgcactgtctgatgtccggtacggcagaaactgatgt ggacgaggcctcaacttcagaacttatgaagcaaacgccttgtgaatggaaaatagagaagaaagagatgccaccaacta gaatggagggggctgtggaaaacactgaagatcaaactgaagaatggaaagacaatgatttccatttgagttatagcaat gacgactccagtccttatggaacacccttaataagctctccttccacaagtacagcctccctgcctttggtgcatttgag ccaagacgatccacttcaacagcatttgctctttaagaaaactctgttatctatttggaagatggttgctggccatagat acagcggtcccttcctgaagccggtttcagagaagcaggctcctggttacaaagatgtggtcaaaagaccaatggatctt tcctccataaagagaaacctgtccaaaggccacattcagcacatggtccagttccaacgcgatctcatgctgatgttcca gaatgccatcatgtacaataactctaaccaccacatccatcacattgctgtggagatgcagcaggaagtcctggagcaac tccaaatgttgggtgaggccctcctgtgctcagacgaaatgcagggatttgtgagaaggtgctgatgaagaagtgaaaaa ggcaggtgcatgtttagaagttaagagttcaaccctgtttcctgaaatcttgttcataaggaaaaagttgtttgtttact aatttagcactgcctgacacctcactttcttttcttaagattcttcatgatagaatgtgtgtcctattttgttcattggg agacttgtttaatatctggaaattcactgttttttttagacaataaaagtactatattgtgtttctttt |
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Protein
| Protein ID | habu1_s1827_g06765.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06765.t1 MGHVWTWLESKEEYFTESEKSSCCKSLCSSPDSSLDFDLKELSSWRETEDDVQEELEESSSQEAVTYLMEPVCVSSPYLA QGPQVFSGAGEQKGRLATAHKGDTKGSLVDKEEELGQESHSEIFKKQAKERSASQRRRNWALQVLEGLPVVNLEAEAMEG LPSLCEEPECSKFQDREFDEDSGKKVMHCLMSGTAETDVDEASTSELMKQTPCEWKIEKKEMPPTRMEGAVENTEDQTEE WKDNDFHLSYSNDDSSPYGTPLISSPSTSTASLPLVHLSQDDPLQQHLLFKKTLLSIWKMVAGHRYSGPFLKPVSEKQAP GYKDVVKRPMDLSSIKRNLSKGHIQHMVQFQRDLMLMFQNAIMYNNSNHHIHHIAVEMQQEVLEQLQMLGADEEVKKAGA CLEVKSSTLFPEILFIRKKLFVY |
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| Protein ID | habu1_s1827_g06765.t2 |
| Definition | - |
>habu1_s1827_g06765.t2 MGHVWTWLESKEEYFTESEKSSCCKSLCSSPDSSLDFDLKELSSWRETEDDVQEELEESSSQEAVSQPETGDSTAWEYAN EGEQDESGKCKQDALLRFLSEVTYLMEPVCVSSPYLAQGPQVFSGAGEQKGRLATAHKGDTKGSLVDKEEELGQESHSEI FKKQAKERSASQRRRNWALQVLEGLPVVNLEAEAMEGLPSLCEEPECSKFQDREFDEDSGKKVMHCLMSGTAETDVDEAS TSELMKQTPCEWKIEKKEMPPTRMEGAVENTEDQTEEWKDNDFHLSYSNDDSSPYGTPLISSPSTSTASLPLVHLSQDDP LQQHLLFKKTLLSIWKMVAGHRYSGPFLKPVSEKQAPGYKDVVKRPMDLSSIKRNLSKGHIQHMVQFQRDLMLMFQNAIM YNNSNHHIHHIAVEMQQEVLEQLQMLGADEEVKKAGACLEVKSSTLFPEILFIRKKLFVY |
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| Protein ID | habu1_s1827_g06765.t3 |
| Definition | - |
>habu1_s1827_g06765.t3 MGHVWTWLESKEEYFTESEKSSCCKSLCSSPDSSLDFDLKELSSWRETEDDVQEELEESSSQEAVSQPETGDSTAWEYAN EGEQDESGKCKQDALLRFLSEVTYLMEPVCVSSPYLAQGPQVFSGAGEQKGRLATAHKGDTKGSLVDKEEELGQESHSEI FKKQAKERSASQRRRNWALQVLEGLPVVNLEAEAMEGLPSLCEEPECSKFQDREFDEDSGKKVMHCLMSGTAETDVDEAS TSELMKQTPCEWKIEKKEMPPTRMEGAVENTEDQTEEWKDNDFHLSYSNDDSSPYGTPLISSPSTSTASLPLVHLSQDDP LQQHLLFKKTLLSIWKMVAGHRYSGPFLKPVSEKQAPGYKDVVKRPMDLSSIKRNLSKGHIQHMVQFQRDLMLMFQNAIM YNNSNHHIHHIAVEMQQEVLEQLQMLGEALLCSDEMQGFVRRC |
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