Gene
| Gene Model ID | habu1_s1827_g06766 |
|---|---|
| Locus | habu1_scaffold1827 : 957785 ... 980145 : - |
| To GenomeBrowser | habu1_scaffold1827:957785..980145 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bromodomain-containing protein 8 isoform x3 | GO:0000812 GO:0005739 GO:0035267 GO:0043967 GO:0043968 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06766.t2 | 1 | 1 | Bromodomain | 804 | 877 | 9.7e-24 | 83.1 | 8.1e-27 | 3.0e-23 | 81.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06766.t2 | gi|602626881|ref|XP_007420392.1| | PREDICTED: bromodomain-containing protein 8-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1827_g06766.t2 | gi|637270524|ref|XP_008103194.1| | PREDICTED: bromodomain-containing protein 8 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06766.t2 | gi|637270527|ref|XP_008103195.1| | PREDICTED: bromodomain-containing protein 8 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06766.t2 | gi|564256356|ref|XP_006267146.1| | PREDICTED: bromodomain-containing protein 8-like isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s1827_g06766.t2 | gi|697000623|ref|XP_009566338.1| | PREDICTED: bromodomain-containing protein 8 isoform X1 [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.7 |
| Venom grand-1 | 16.9 |
| Pit, infrared sensing | 11.3 |
| Nose | 8.5 |
| Brain-1 | 8.1 |
| Eye | 11.4 |
| fetal fibroblast | 8.3 |
| venom gland-2 | 16.2 |
| Brain-2 | 7.2 |
| Spleen | 13.2 |
| Lung | 13.8 |
| Liver | 17.3 |
| Kidney | 12.3 |
| Pancreas | 17.4 |
| Small intestine | 13.8 |
| Large intestine | 12.2 |
| Stomach | 11.9 |
| heart | 9.7 |
| ovary | 34.0 |
| cheek muscle | 18.5 |
Transcript
| Transcript ID | habu1_s1827_g06766.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06766.t1 actcgatgtctggggagcttcgaaatctatcgtcctttcgcgaaaatggcggccggagcggggaaacacaagttgatgaa tgctgggcccacggaaccgtggtctattcgagagaagctgtgcttggcttcttctgtcatgcgaagtggggaccagaact gggtatctgtcagcagagctattaaaccctttgcagaaccaggccgtccaccagattggttttctcagaagcactgtgca tcacaatattctgagctcctggagacaacagagactccaaaaagaaagcgtggtgagaaaggagaagttgtagaaacagt agaagatgttattgtgagaaaactgacagcagaacgagtagaggagcttaagaagtttattaaggagacacaggaaaagt acaggcagctgaagagagatgcagaactgatccaggcaggacatatggatcacaggctggaggaaatttacaatgacatt gtgatgaaaaaaagaatagaagaagaggaggctgaagtgaagagaaaagctactgatgctgcttatcaagctcgtcaagc aattaaaaatccatcgcgaaggatgccaggaataatggtccgttctccagcagggtcaacatcaccaggagcagagtatg gtctgggagacttgtctcaacccagtgtggaagagacaagtccaggggtaactccagggacattgcccagcaccccagtt gcctccttcattgggatccctgacacccctatgggctccacctccctggatgcccccttgaccccagtcacagatgattc aacccagaaaaagatgctaggacagaaagcgactccgcctccttctcctctgctttcagagctgctgaagaaaggcagcc tcctgcccacaagccccaggctggtggcagagggtgagctttctgttgttgctggtcatccaagcagctctggtctcctc ctggaagtgggaggagttcttccagtattacacggtggggaaatgcagtcggcctctaccactattcctgcgacccctgc tgcgtcagtgaatcagcccaacacctgtgtttccatggaggcagtgcctgatcctcacactgtgacagtatcaatggata gcagtgaaatttccatgatcattgattccatcaagaaagactgcctaggctctggggcatctggtggtgtagggacttcc aaagaccacatggatagcaaagaagacctggatttggctgagaagatggatattgccgtttcctacacaggggaagagcc ttcctacactggggaagaacttgattttgaaactgttggggacatcatagctatcattgaggacaaggtggatgatcatc ctgaagtcttggatgtagcagcagtagaggctgccttgtctttctgtgaagaaattgaggatccccagtctctaaccagt ccttgggagcaccccctccagcgagagcatccgatccaacaggagcacgacaagcagagccagataccccaaatgacagt aacgataaagcaagaaagaccggactgtgaggaattggaagccaaggggatccgagatctgatgagccttggggatttgg gagccgatattaaaactgagcctgctgaacaagggcaggtacgtttgggctctgaagaagctgctgtactagcagctaga agaagtgaagcttctgagttgaggggccatagctctgaagatgaagagaccacagtggttggtttgacaggctctgatat ggatatagaatcgaccaaagatgacatggatcatggcactgtgaaagcagagcttcctcctgatgaggagacttcctctc cacacgctccaagtgcaagtgaagattcctcacaggcagatgtccaccacaaatacgagctgtcagaatcaatgaaagat gaagctcaagctctttttgaaaaccagctgaagggtgaagaggatgaggaggatggtgccagcgaggctgccagtttgga ggagcccaaagaggaagatcagggtgagggatatctctcagaaatggacaatgagccccctgtgagtgagagtgatgatg gcttcagtatccataatgcacctttgcagtctcacacgctggctgattccattcccagcagccctgcctcctcacagttc tctgtttgcagtgaggatcaggaggctattcaggcacaaaaaatctggaagaaggctattatgctggtttggagagcagc tgctaatcacaggtatgccaatgtcttcttacagcccgtgactgacgatattgctccaggttaccatagtattgtacaga ggccaatggatttgtcaacaattaagaaaaacattgagaatgggttgatcagaaccacagcagagttccaacgagatatt atgctgatgttccaaaacgctgtcatgtacaatagttctgatcatgatgtttatcacatggctgtggaaatgcagcgaga tgtcttggagcagattcagcaatttctagccacgcagttgatcatgcagacaaatgagtctgggatcagtgcaaaaagtc tccgtggacgagattctactcggaaacaagatgcttcggagaaggacagtggccctatgggctccccagcatttcttctt tctctctttgatgggggaactagaggacgtcgttgtgccattgaagcagatatgaagatgaagaaatgacgcaaaggcag gagacaccccaggctgtggcatctgaatgagaattttcctgattctgaatgagacacggctatggatggccatctgtgtt agtgtgtgttatcctggaatgcgtaactggggaaatcccagggccaggagaacgatcctttgcctgttctaaggcagttg taatcaggtccttgagtgttctgattagctagcaactggtggctagtatgtattgtaatgtgatgtgtacagattttttt tatgtatttgtggattgtaaatgtgtataataaattgtagtagagaatcaagtatagcatagtatgctggctactttcat ttttgtattttactactttcaagccagaagattttaaacattcatttccctattattttttacttctaaaattcttattt tacttgtagcagcagttcataatgatgcctcatgttagacaagtaatagcacaaatcagtcacatttcatattgaaggca aaagatgcgattgcaggcaacttagcttctgttataaaaacttggaaatgttaaattact |
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| Transcript ID | habu1_s1827_g06766.t2 |
| Definition | - |
>habu1_s1827_g06766.t2 actcgatgtctggggagcttcgaaatctatcgtcctttcgcgaaaatggcggccggagcggggaaacacaagttgatgaa tgctgggcccacggaaccgtggtctattcgagagaagctgtgcttggcttcttctgtcatgcgaagtggggaccagaact gggtatctgtcagcagagctattaaaccctttgcagaaccaggccgtccaccagattggttttctcagaagcactgtgca tcacaatattctgagctcctggagacaacagagactccaaaaagaaagcgtggtgagaaaggagaagttgtagaaacagt agaagatgttattgtgagaaaactgacagcagaacgagtagaggagcttaagaagtttattaaggagacacaggaaaagt acaggcagctgaagagagatgcagaactgatccaggcaggacatatggatcacaggctggaggaaatttacaatgacatt gtgatgaaaaaaagaatagaagaagaggaggctgaagtgaagagaaaagctactgatgctgcttatcaagctcgtcaagc aattaaaaatccatcgcgaaggatgccaggaataatggtccgttctccagcagggtcaacatcaccaggagcagagtatg gtctgggagacttgtctcaacccagtgtggaagagacaagtccaggggtaactccagggacattgcccagcaccccagtt gcctccttcattgggatccctgacacccctatgggctccacctccctggatgcccccttgaccccagtcacagatgattc aacccagaaaaagatgctaggacagaaagcgactccgcctccttctcctctgctttcagagctgctgaagaaaggcagcc tcctgcccacaagccccaggctggtggcagagggtgagctttctgttgttgctggtcatccaagcagctctggtctcctc ctggaagtgggaggagttcttccagtattacacggtggggaaatgcagtcggcctctaccactattcctgcgacccctgc tgcgtcaggtgctcctactctttcccgccttttagaagctggtccagcacaattcacctcatcgcttgcttccttttctg ctgttgccagtgagcctccagccaaactcctgcctccccctatagagtccgtgtctcaggccaccatagtcatggtgccc acactacaagcgccacctgctgtgccatctgctgcaactccagaaagtgtagcgacagtgaatcagcccaacacctgtgt ttccatggaggcagtgcctgatcctcacactgtgacagtatcaatggatagcagtgaaatttccatgatcattgattcca tcaagaaagactgcctaggctctggggcatctggtggtgtagggacttccaaagaccacatggatagcaaagaagacctg gatttggctgagaagatggatattgccgtttcctacacaggggaagagccttcctacactggggaagaacttgattttga aactgttggggacatcatagctatcattgaggacaaggtggatgatcatcctgaagtcttggatgtagcagcagtagagg ctgccttgtctttctgtgaagaaattgaggatccccagtctctaaccagtccttgggagcaccccctccagcgagagcat ccgatccaacaggagcacgacaagcagagccagataccccaaatgacagtaacgataaagcaagaaagaccggactgtga ggaattggaagccaaggggatccgagatctgatgagccttggggatttgggagccgatattaaaactgagcctgctgaac aagggcaggtacgtttgggctctgaagaagctgctgtactagcagctagaagaagtgaagcttctgagttgaggggccat agctctgaagatgaagagaccacagtggttggtttgacaggctctgatatggatatagaatcgaccaaagatgacatgga tcatggcactgtgaaagcagagcttcctcctgatgaggagacttcctctccacacgctccaagtgcaagtgaagattcct cacaggcagatgtccaccacaaatacgagctgtcagaatcaatgaaagatgaagctcaagctctttttgaaaaccagctg aagggtgaagaggatgaggaggatggtgccagcgaggctgccagtttggaggagcccaaagaggaagatcagggtgaggg atatctctcagaaatggacaatgagccccctgtgagtgagagtgatgatggcttcagtatccataatgcacctttgcagt ctcacacgctggctgattccattcccagcagccctgcctcctcacagttctctgtttgcagtgaggatcaggaggctatt caggcacaaaaaatctggaagaaggctattatgctggtttggagagcagctgctaatcacaggtatgccaatgtcttctt acagcccgtgactgacgatattgctccaggttaccatagtattgtacagaggccaatggatttgtcaacaattaagaaaa acattgagaatgggttgatcagaaccacagcagagttccaacgagatattatgctgatgttccaaaacgctgtcatgtac aatagttctgatcatgatgtttatcacatggctgtggaaatgcagcgagatgtcttggagcagattcagcaatttctagc cacgcagttgatcatgcagacaaatgagtctgggatcagtgcaaaaagtctccgtggacgagattctactcggaaacaag atgcttcggagaaggacagtggccctatgggctccccagcatttcttctttctctctttgatgggggaactagaggacgt cgttgtgccattgaagcagatatgaagatgaagaaatgacgcaaaggcaggagacaccccaggctgtggcatctgaatga gaattttcctgattctgaatgagacacggctatggatggccatctgtgttagtgtgtgttatcctggaatgcgtaactgg ggaaatcccagggccaggagaacgatcctttgcctgttctaaggcagttgtaatcaggtccttgagtgttctgattagct agcaactggtggctagtatgtattgtaatgtgatgtgtacagattttttttatgtatttgtggattgtaaatgtgtataa taaattgtagtagagaatcaagtatagcatagtatgctggctactttcatttttgtattttactactttcaagccagaag attttaaacattcatttccctattattttttacttctaaaattcttattttacttgtagcagcagttcataatgatgcct catgttagacaagtaatagcacaaatcagtcacatttcatattgaaggcaaaagatgcgattgcaggcaacttagcttct gttataaaaacttggaaatgttaaattact |
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Protein
| Protein ID | habu1_s1827_g06766.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06766.t1 MAAGAGKHKLMNAGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKR KRGEKGEVVETVEDVIVRKLTAERVEELKKFIKETQEKYRQLKRDAELIQAGHMDHRLEEIYNDIVMKKRIEEEEAEVKR KATDAAYQARQAIKNPSRRMPGIMVRSPAGSTSPGAEYGLGDLSQPSVEETSPGVTPGTLPSTPVASFIGIPDTPMGSTS LDAPLTPVTDDSTQKKMLGQKATPPPSPLLSELLKKGSLLPTSPRLVAEGELSVVAGHPSSSGLLLEVGGVLPVLHGGEM QSASTTIPATPAASVNQPNTCVSMEAVPDPHTVTVSMDSSEISMIIDSIKKDCLGSGASGGVGTSKDHMDSKEDLDLAEK MDIAVSYTGEEPSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEEIEDPQSLTSPWEHPLQREHPIQQE HDKQSQIPQMTVTIKQERPDCEELEAKGIRDLMSLGDLGADIKTEPAEQGQVRLGSEEAAVLAARRSEASELRGHSSEDE ETTVVGLTGSDMDIESTKDDMDHGTVKAELPPDEETSSPHAPSASEDSSQADVHHKYELSESMKDEAQALFENQLKGEED EEDGASEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNAPLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKI WKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRTTAEFQRDIMLMFQNAVMYNSSDH DVYHMAVEMQRDVLEQIQQFLATQLIMQTNESGISAKSLRGRDSTRKQDASEKDSGPMGSPAFLLSLFDGGTRGRRCAIE ADMKMKK |
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| Protein ID | habu1_s1827_g06766.t2 |
| Definition | - |
>habu1_s1827_g06766.t2 MAAGAGKHKLMNAGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKR KRGEKGEVVETVEDVIVRKLTAERVEELKKFIKETQEKYRQLKRDAELIQAGHMDHRLEEIYNDIVMKKRIEEEEAEVKR KATDAAYQARQAIKNPSRRMPGIMVRSPAGSTSPGAEYGLGDLSQPSVEETSPGVTPGTLPSTPVASFIGIPDTPMGSTS LDAPLTPVTDDSTQKKMLGQKATPPPSPLLSELLKKGSLLPTSPRLVAEGELSVVAGHPSSSGLLLEVGGVLPVLHGGEM QSASTTIPATPAASGAPTLSRLLEAGPAQFTSSLASFSAVASEPPAKLLPPPIESVSQATIVMVPTLQAPPAVPSAATPE SVATVNQPNTCVSMEAVPDPHTVTVSMDSSEISMIIDSIKKDCLGSGASGGVGTSKDHMDSKEDLDLAEKMDIAVSYTGE EPSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEEIEDPQSLTSPWEHPLQREHPIQQEHDKQSQIPQM TVTIKQERPDCEELEAKGIRDLMSLGDLGADIKTEPAEQGQVRLGSEEAAVLAARRSEASELRGHSSEDEETTVVGLTGS DMDIESTKDDMDHGTVKAELPPDEETSSPHAPSASEDSSQADVHHKYELSESMKDEAQALFENQLKGEEDEEDGASEAAS LEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNAPLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWR AAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRTTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQ RDVLEQIQQFLATQLIMQTNESGISAKSLRGRDSTRKQDASEKDSGPMGSPAFLLSLFDGGTRGRRCAIEADMKMKK |
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