Gene
| Gene Model ID | habu1_s1827_g06767 |
|---|---|
| Locus | habu1_scaffold1827 : 980346 ... 983024 : + |
| To GenomeBrowser | habu1_scaffold1827:980346..983024 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| h aca ribonucleoprotein complex subunit 2 | GO:0005730 GO:0005737 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06767.t1 | 1 | 1 | Ribosomal_L7Ae | 46 | 137 | 5.5e-22 | 77.1 | 4.8e-26 | 7.1e-22 | 76.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06767.t1 | gi|602626871|ref|XP_007420387.1| | PREDICTED: H/ACA ribonucleoprotein complex subunit 2 [Python bivittatus] | 0.0 |
| habu1_s1827_g06767.t1 | gi|327265685|ref|XP_003217638.1| | PREDICTED: H/ACA ribonucleoprotein complex subunit 2 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06767.t1 | gi|541963558|ref|XP_005437040.1| | PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein-like [Falco cherrug] | 0.0 |
| habu1_s1827_g06767.t1 | gi|759125781|ref|XP_011360467.1| | PREDICTED: H/ACA ribonucleoprotein complex subunit 2 [Pteropus vampyrus] | 0.0 |
| habu1_s1827_g06767.t1 | gi|585653779|ref|XP_006884475.1| | PREDICTED: H/ACA ribonucleoprotein complex subunit 2 isoform X1 [Elephantulus edwardii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.1 |
| Venom grand-1 | 11.7 |
| Pit, infrared sensing | 11.3 |
| Nose | 9.9 |
| Brain-1 | 6.4 |
| Eye | 10.8 |
| fetal fibroblast | 38.7 |
| venom gland-2 | 18.1 |
| Brain-2 | 6.8 |
| Spleen | 9.3 |
| Lung | 10.0 |
| Liver | 7.5 |
| Kidney | 12.3 |
| Pancreas | 15.2 |
| Small intestine | 13.0 |
| Large intestine | 10.1 |
| Stomach | 10.3 |
| heart | 8.9 |
| ovary | 131.2 |
| cheek muscle | 22.6 |
Transcript
| Transcript ID | habu1_s1827_g06767.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06767.t1 gtgggtctaggttcttcgaattgcagccatgggtcgagtcaagcaccaggaatctgaggaagcgccggagaccgaggcaa caaccccagaacggtcgtaccacgagctggtcgcaaacgtaaatgctattgcgcggccgctagcttctcggaagctcaca cgcaaactctacaagtgcatcaaaaaagcatcgaagtttaaacaaatccggcgaggggtgaaagaagtccagaaattcat caacaaaggcgaaaaaggaatcacagttcttgcaggagacacattgcctattgatgtttattgccacatccccatcatgt gtgaagataggagtcttccctatgtatatattccatctaaaacggatttgggagcagcagcaggctcaaaacgcccaacc tgcgttatcatgataaaggctcatgaggaatatcaagaagcttacaacgagtgcttggaagaagtggaggctcttcccct tcctttgtgaagaacattaataacagacgttattaagactccaatatgatataatatgctggattctgtagactttatgt ggttaaatatcagtttcatgccagtttggtatgacagttggccttgattgttgagctgaggaatatatcaaatgacctac tgagaatccaggaaccatggcagctatgctgtaatcgtctatttttgaagagtttgggtagcaatacttgctggaaattt gtgttaaaatgttgctctaaaagaattctagaccattaggataaagcaggggtagacaaccttgattcttttatgatttg tggatttcaactctcagaattcctgagtcagcatggctggttcaggaattctgggtattgaagtccacaagtcataaaag agccacggttacctgcccctgggatagaggaaccattaagtaataaaaagatttgtaaatatattggct |
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Protein
| Protein ID | habu1_s1827_g06767.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06767.t1 MGRVKHQESEEAPETEATTPERSYHELVANVNAIARPLASRKLTRKLYKCIKKASKFKQIRRGVKEVQKFINKGEKGITV LAGDTLPIDVYCHIPIMCEDRSLPYVYIPSKTDLGAAAGSKRPTCVIMIKAHEEYQEAYNECLEEVEALPLPL |
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