Gene
| Gene Model ID | habu1_s1827_g06768 |
|---|---|
| Locus | habu1_scaffold1827 : 983028 ... 994275 : - |
| To GenomeBrowser | habu1_scaffold1827:983028..994275 |
| Genes list of scaffold | habu1_scaffold1827 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06768.t2 | 1 | 1 | CLTH | 154 | 297 | 4.3e-31 | 107.5 | 5.1e-34 | 1.3e-30 | 106.0 |
| habu1_s1827_g06768.t2 | 1 | 1 | zf-RING_UBOX | 336 | 375 | 1.0e-17 | 63.5 | 1.0e-20 | 2.5e-17 | 62.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06768.t2 | gi|21362098|ref|NP_073599.2| | protein RMD5 homolog B isoform a [Homo sapiens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.4 |
| Venom grand-1 | 8.4 |
| Pit, infrared sensing | 8.1 |
| Nose | 7.1 |
| Brain-1 | 10.3 |
| Eye | 10.0 |
| fetal fibroblast | 15.1 |
| venom gland-2 | 9.6 |
| Brain-2 | 11.2 |
| Spleen | 6.0 |
| Lung | 5.7 |
| Liver | 5.0 |
| Kidney | 4.2 |
| Pancreas | 6.0 |
| Small intestine | 4.9 |
| Large intestine | 5.9 |
| Stomach | 6.4 |
| heart | 9.7 |
| ovary | 53.7 |
| cheek muscle | 12.6 |
Transcript
| Transcript ID | habu1_s1827_g06768.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06768.t1 ccgcgaactattctctctactccttaaaccggggttgggggtggatgcccggctggttggcctcgtctccagttcttctt gtcagcgctgccggcgttcaaccgagcgtgtcaggcaggccgggctaatggagcggtgcgcctgcgtagagagggaggtg gacaaagtgctgcagaagttcctgtgctacggccagcattgtgagcgaggcctggaagagctgctgcgctacgtcagcca gctaagggaggagctgggcgctgcagccttgcagcgagcacctctttctgctacactctcccttgttatgtctcagtgct gtaagaagatcaaggacactgttcagaatttagcttcagatcacaaagatattcacagcagtatctcccgcgtgggcaaa gccatagacagaaattttgatgctgatttgtgtggcattgtccctgccctggtctgggaaacccaggagaaacagatcct ggtattggcaattatagaacatctctatcaacaaggaatgttgggagtggctgaagaactgtgtcaggagtcaactgtga atgtagatgtagacttcaaaaaaccattcctggaactgaacagcattttggaagccttgcacaaacaagacctgggacct gctctgaggcagcagctggctgatctgaacagtactctggagtttcagctgcatcgactccatttcatcaggcttctttc tggcggccccggcaaggagttggaggctctgagctacgcacgtcactttcaaccctttgcccacctacacaagcaagaga tccaagtgatgatgggcagtctggtatacctacgcttaggccttcagaattctccatataggcatctactggatgaaagt cattggacagagatttgtgagtctttcactcgtgatgcatgtgccttgctgggtctctcagtggagtcacctctcagtgt cagttttgccgcagggtgtgtagcattgccagttctgatgaacatcaaggctgtgattgagcagagacaatgcacaggtg tctggagccacaaggatgagctgcccattgaagttgagctagggatgaaatgctggtatcattcagtctttgcatgtccc atcctgcgccaacagaccacagattccaatccacccatcaagttgatttgtggacatgttatttctcgagatgctctcaa caagcttatcaatggagggaaactgaagtgtccatattgccccatggaacaaaacccagctgatggaaaacgcctcatct tttgataatggcaagatttgttatgaaataggctcttcaaatacagttgtgtgcaagcagaactctgtaatatcctgctt aatataacaactgctaaacaatggaagccgattagtttaggggaccagataaaaacttcgcaggatgaggcaatgcaata tccacacatatactccatgtctgcctgttttaggcttcatcctggcagtttcaacaggcacttctcctgttgttgagttt atcttgtccctattcacaattctgtttcttgttggattatatcacaagcgctctatgtggagctgctatccccactttta atgcttacagattaccaaattcttgaaaacagaaatgtgtttcataaaaatgcagtatatgaggtaagaaaagcaggtgc agaacccagcttactcctgttttgaaaaaactttcaagaatggaaatgaggacaagtgtaggcttactggtgtttcctaa cgttttatgtcagcctctgtatacaatattgttcttcaaagactaagagatgagtaattatacaatggaatatttcctta gaatatgaatacaaattgannnnnnnnnnntagtagagaaataaaagctcaaaggtcaggatcaattttcttccttatat aaacaatttatagcatcagagcatgtactatttaaatatttaaaaatctaaaacctgtaatgagtaacagtttggtgctt aacagcttgtaataaaatgttgcatttgtgtacgtaaaagggatttaaaatctgccttagagatactaatgtagagacat cttcaggcatagattatacctaatagccaggcttggtgttctcatggactaatcgtaaaggtttcctcatacagctcttt aggaataattttggagagtgacattattttaacttggaggtttcaagtaagaactagtgcttacaatttacactttacaa aatttggttgtctttttctgaagcaaaaaacctgtattgacctagagaaaggataattgaaaaaaaaaacaaaaaacagt tgccactatagcctttaagagtagccagaggctttatgcatgtgttctcaattccatccaatcatgtatatatatcaaac atctaaagggggcagtgagtgacatagaaacaaattgaaataaattactttgcatgttgccatacaatgcaatatctaca aaaccatatttaaatcttcactgtaagactaatttgtataaagcatcttagtctagctggcccggggctgggtatgtttt tgagaatgcttcatatttgcttctacagtacagtatgatctagtttacaagggctgaaataacactgccctttaataaag gggctgtagatgacttgtattttttaattttcaagagcatatctgtatgcataagagagcatgcagtgaggcaagaaatg ttctctactccaagcagagaggaacaaaactggaaggtactttggagtaagcaagtaagatcgtgtgatattaaagtcta tagtatattgagttgga |
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| Transcript ID | habu1_s1827_g06768.t2 |
| Definition | - |
>habu1_s1827_g06768.t2 ccgcgaactattctctctactccttaaaccggggttgggggtggatgcccggctggttggcctcgtctccagttcttctt gtcagcgctgccggcgttcaaccgagcgtgtcaggcaggccgggctaatggagcggtgcgcctgcgtagagagggaggtg gacaaagtgctgcagaagttcctgtgctacggccagcattgtgagcgaggcctggaagagctgctgcgctacgtcagcca gctaagggaggagctgggcgctgcagccttgcagcgagcacctctttctgctacactctcccttgttatgtctcagtgct gtaagaagatcaaggacactgttcagaatttagcttcagatcacaaagatattcacagcagtatctcccgcgtgggcaaa gccatagacagaaattttgatgctgatttgtgtggcattgtccctgccctggtctgggaaacccaggagaaacagatcct ggtattggcaattatagaacatctctatcaacaaggaatgttgggagtggctgaagaactgtgtcaggagtcaactgtga atgtagatgtagacttcaaaaaaccattcctggaactgaacagcattttggaagccttgcacaaacaagacctgggacct gctctgagctgggcagtcttccacaggcagcagctggctgatctgaacagtactctggagtttcagctgcatcgactcca tttcatcaggcttctttctggcggccccggcaaggagttggaggctctgagctacgcacgtcactttcaaccctttgccc acctacacaagcaagagatccaagtgatgatgggcagtctggtatacctacgcttaggccttcagaattctccatatagg catctactggatgaaagtcattggacagagatttgtgagtctttcactcgtgatgcatgtgccttgctgggtctctcagt ggagtcacctctcagtgtcagttttgccgcagggtgtgtagcattgccagttctgatgaacatcaaggctgtgattgagc agagacaatgcacaggtgtctggagccacaaggatgagctgcccattgaagttgagctagggatgaaatgctggtatcat tcagtctttgcatgtcccatcctgcgccaacagaccacagattccaatccacccatcaagttgatttgtggacatgttat ttctcgagatgctctcaacaagcttatcaatggagggaaactgaagtgtccatattgccccatggaacaaaacccagctg atggaaaacgcctcatcttttgataatggcaagatttgttatgaaataggctcttcaaatacagttgtgtgcaagcagaa ctctgtaatatcctgcttaatataacaactgctaaacaatggaagccgattagtttaggggaccagataaaaacttcgca ggatgaggcaatgcaatatccacacatatactccatgtctgcctgttttaggcttcatcctggcagtttcaacaggcact tctcctgttgttgagtttatcttgtccctattcacaattctgtttcttgttggattatatcacaagcgctctatgtggag ctgctatccccacttttaatgcttacagattaccaaattcttgaaaacagaaatgtgtttcataaaaatgcagtatatga ggtaagaaaagcaggtgcagaacccagcttactcctgttttgaaaaaactttcaagaatggaaatgaggacaagtgtagg cttactggtgtttcctaacgttttatgtcagcctctgtatacaatattgttcttcaaagactaagagatgagtaattata caatggaatatttccttagaatatgaatacaaattgannnnnnnnnnntagtagagaaataaaagctcaaaggtcaggat caattttcttccttatataaacaatttatagcatcagagcatgtactatttaaatatttaaaaatctaaaacctgtaatg agtaacagtttggtgcttaacagcttgtaataaaatgttgcatttgtgtacgtaaaagggatttaaaatctgccttagag atactaatgtagagacatcttcaggcatagattatacctaatagccaggcttggtgttctcatggactaatcgtaaaggt ttcctcatacagctctttaggaataattttggagagtgacattattttaacttggaggtttcaagtaagaactagtgctt acaatttacactttacaaaatttggttgtctttttctgaagcaaaaaacctgtattgacctagagaaaggataattgaaa aaaaaaacaaaaaacagttgccactatagcctttaagagtagccagaggctttatgcatgtgttctcaattccatccaat catgtatatatatcaaacatctaaagggggcagtgagtgacatagaaacaaattgaaataaattactttgcatgttgcca tacaatgcaatatctacaaaaccatatttaaatcttcactgtaagactaatttgtataaagcatcttagtctagctggcc cggggctgggtatgtttttgagaatgcttcatatttgcttctacagtacagtatgatctagtttacaagggctgaaataa cactgccctttaataaaggggctgtagatgacttgtattttttaattttcaagagcatatctgtatgcataagagagcat gcagtgaggcaagaaatgttctctactccaagcagagaggaacaaaactggaaggtactttggagtaagcaagtaagatc gtgtgatattaaagtctatagtatattgagttgga |
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Protein
| Protein ID | habu1_s1827_g06768.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06768.t1 MERCACVEREVDKVLQKFLCYGQHCERGLEELLRYVSQLREELGAAALQRAPLSATLSLVMSQCCKKIKDTVQNLASDHK DIHSSISRVGKAIDRNFDADLCGIVPALVWETQEKQILVLAIIEHLYQQGMLGVAEELCQESTVNVDVDFKKPFLELNSI LEALHKQDLGPALRQQLADLNSTLEFQLHRLHFIRLLSGGPGKELEALSYARHFQPFAHLHKQEIQVMMGSLVYLRLGLQ NSPYRHLLDESHWTEICESFTRDACALLGLSVESPLSVSFAAGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEVELGM KCWYHSVFACPILRQQTTDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRLIF |
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| Protein ID | habu1_s1827_g06768.t2 |
| Definition | - |
>habu1_s1827_g06768.t2 MERCACVEREVDKVLQKFLCYGQHCERGLEELLRYVSQLREELGAAALQRAPLSATLSLVMSQCCKKIKDTVQNLASDHK DIHSSISRVGKAIDRNFDADLCGIVPALVWETQEKQILVLAIIEHLYQQGMLGVAEELCQESTVNVDVDFKKPFLELNSI LEALHKQDLGPALSWAVFHRQQLADLNSTLEFQLHRLHFIRLLSGGPGKELEALSYARHFQPFAHLHKQEIQVMMGSLVY LRLGLQNSPYRHLLDESHWTEICESFTRDACALLGLSVESPLSVSFAAGCVALPVLMNIKAVIEQRQCTGVWSHKDELPI EVELGMKCWYHSVFACPILRQQTTDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRLIF |
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