Gene
| Gene Model ID | habu1_s1827_g06771 |
|---|---|
| Locus | habu1_scaffold1827 : 1063212 ... 1067135 : - |
| To GenomeBrowser | habu1_scaffold1827:1063212..1067135 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane emp24 domain-containing protein 9 | GO:0000139 GO:0005783 GO:0005793 GO:0007030 GO:0010638 GO:0016021 GO:0019905 GO:0048205 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06771.t1 | 1 | 1 | EMP24_GP25L | 27 | 219 | 0.0 | 192.3 | 0.0 | 0.0 | 192.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06771.t1 | gi|602626865|ref|XP_007420384.1| | PREDICTED: transmembrane emp24 domain-containing protein 9 [Python bivittatus] | 0.0 |
| habu1_s1827_g06771.t1 | gi|530576676|ref|XP_005282305.1| | PREDICTED: transmembrane emp24 domain-containing protein 9 [Chrysemys picta bellii] | 0.0 |
| habu1_s1827_g06771.t1 | gi|327265677|ref|XP_003217634.1| | PREDICTED: transmembrane emp24 domain-containing protein 9 [Anolis carolinensis] | 0.0 |
| habu1_s1827_g06771.t1 | gi|585653765|ref|XP_006884471.1| | PREDICTED: transmembrane emp24 domain-containing protein 9-like [Elephantulus edwardii] | 0.0 |
| habu1_s1827_g06771.t1 | gi|39725636|ref|NP_059980.2| | transmembrane emp24 domain-containing protein 9 precursor [Homo sapiens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 30.2 |
| Venom grand-1 | 42.9 |
| Pit, infrared sensing | 28.6 |
| Nose | 39.9 |
| Brain-1 | 12.8 |
| Eye | 23.9 |
| fetal fibroblast | 60.1 |
| venom gland-2 | 238.5 |
| Brain-2 | 13.1 |
| Spleen | 31.5 |
| Lung | 21.0 |
| Liver | 21.6 |
| Kidney | 15.4 |
| Pancreas | 52.4 |
| Small intestine | 17.3 |
| Large intestine | 17.6 |
| Stomach | 24.0 |
| heart | 10.4 |
| ovary | 14.8 |
| cheek muscle | 30.2 |
Transcript
| Transcript ID | habu1_s1827_g06771.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06771.t1 gcgcgagagcggaggcaggacgcaagcgcggcatcatggcggctcccggcggttggtcaagtgtgctcttgtggctgctg ctggcggcggggatcgcaccccgcgcgtggggcctttacttccacttgggcgaaacggaacgcaaatgtttcatcgagga gattccggacgagaccatggtcatcgggaattaccggacgcagttgtatgataagcagcgagaagagtaccttcccgcta ctcccggcctgggcatgtttgtggaagtgaaggaccccgatgaaaaggtggtgttgtcccggcagtatggctcagagggc agattcatctttacttcacacactccaggagagcatcagatctgcctgcactctaattccacaaagttttccctttttgc aggaggcatgctgagggtccatcttgacatccaggttggggaacatgccaatgattatgctgaaattgcagctaaggaca agctgagtgagctgcagttgcgtgttcgccagcttctggagcagatagaacagatccagaaagaacaaaactaccaaagg tggcgagaggagcgtttccggcaaaccagtgaaagcacaaaccagcgggttctctggtggtccatagtccagactctcat tcttgtagtcattggagtttggcaaatgaggcacctaaagagtttctttgaagccaagaagctggtataaaaaagagagt aatatcagcccaaagcgtgcatttctcccaggagcagttcctggcacttcaggtgtctgcgttgatcttctcttctctca ttggccctttccaccagactggttacttgccaggatctgtgccatctacctcccactgtgtcagctcttcttcctccttc aacatgtcagcctgtggtgattttggtgcagtgttttggccccaggaagatgctgccttctttccagatagtcaagacca gccccctcctctctacctctatattatgaggattgtgttttgtttttatatttgcagagaggggagggaggcaccacgtc ttcaacttttctcctggctaaatatgttcttcaaaattagactctcttctgaaaggtgattggaactttgtgtagccagt atcacagtatatcaagagccaagaaaacctgctgtgtttaactgtgttgtgtatgtaatagcactgatttctaaatacca ccagtgcatcactcaggagaatgttttgaatgagaagatctggaggttctccttccaattctccttttctatatattcat cataaaataggatgcagtttgatttggggatttgctgctatggaattaataggattttttctgaaagaaatctgtgttac aggattaatgtgctgatcactgggctattaataaaggatgatttaagtatttgaatt |
|
Protein
| Protein ID | habu1_s1827_g06771.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06771.t1 MAAPGGWSSVLLWLLLAAGIAPRAWGLYFHLGETERKCFIEEIPDETMVIGNYRTQLYDKQREEYLPATPGLGMFVEVKD PDEKVVLSRQYGSEGRFIFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQL LEQIEQIQKEQNYQRWREERFRQTSESTNQRVLWWSIVQTLILVVIGVWQMRHLKSFFEAKKLV |
|