Gene
| Gene Model ID | habu1_s1827_g06772 |
|---|---|
| Locus | habu1_scaffold1827 : 1068020 ... 1073085 : - |
| To GenomeBrowser | habu1_scaffold1827:1068020..1073085 |
| Genes list of scaffold | habu1_scaffold1827 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicular integral-membrane protein vip36 | GO:0001948 GO:0005537 GO:0005615 GO:0005793 GO:0005794 GO:0005887 GO:0006890 GO:0009986 GO:0031072 GO:0050766 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1827_g06772.t2 | 1 | 1 | Lectin_leg-like | 31 | 255 | 0.0 | 325.6 | 0.0 | 0.0 | 325.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1827_g06772.t2 | gi|729760843|ref|XP_010577342.1| | PREDICTED: vesicular integral-membrane protein VIP36 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s1827_g06772.t2 | gi|543360050|ref|XP_005523716.1| | PREDICTED: vesicular integral-membrane protein VIP36 [Pseudopodoces humilis] | 0.0 |
| habu1_s1827_g06772.t2 | gi|733908858|ref|XP_010717280.1| | PREDICTED: vesicular integral-membrane protein VIP36, partial [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 31.5 |
| Venom grand-1 | 93.5 |
| Pit, infrared sensing | 43.9 |
| Nose | 46.8 |
| Brain-1 | 11.1 |
| Eye | 26.0 |
| fetal fibroblast | 51.7 |
| venom gland-2 | 181.7 |
| Brain-2 | 14.1 |
| Spleen | 33.0 |
| Lung | 34.8 |
| Liver | 66.0 |
| Kidney | 34.9 |
| Pancreas | 55.4 |
| Small intestine | 42.7 |
| Large intestine | 39.2 |
| Stomach | 40.5 |
| heart | 25.3 |
| ovary | 29.8 |
| cheek muscle | 34.7 |
Transcript
| Transcript ID | habu1_s1827_g06772.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06772.t1 cgccgacctctcctgtgttaaaggctcgcctatgtggatccaagggctgggcttggttttgccccttcatgaagggggga gaaaacccgaaaggctatggggacagcgctgcccgttcacacacatcttctcagggatacctagcccgtaaaacttcaca accctttctggccctaagcagacttatccatcaataatgataattatgaatagcaggggttggctccagttcaatgcctc tctgggattttcaagggagtacaatgttgactagccagtatgttcgactgacccctgatgagcgcagcaaggaaggttct atctggaaccgggtgccctgttttctgaaggactgggagcttcatgttcattttaaagttcacggggcagggaagaagaa tctccatggagatggttttgccctgtggtacactcgggagcgccttactgcaggccctgtatttggcagtaaagacaaat tccatggattggccattttcctggatacttatcccaatgaggaaactactgagcgtgtgtttccttatgtttctggtatg gttaacaatggatccctgacctatgaccatagtaaagatggtcgctcgacggagttggcaggctgcacagctgacattcg taatcagaaccacgacacctttttggctgtccgatattctcgggggcgtctgacggtgatgactgatgtggaggataaaa atgaatggaaaaactgctttgatgttgcaggagttcggttacccactggttatttctttggggcttctgctggtacagga gatctatctgataatcatgatatcgtttcgatgaagctatttcagttgatggtggaacattccccagaagacgaaaacat tgactggacaaagattgagcccagcgtcagtcttttcaaatcacccaaagataatgtagatgatccaacaggaaacttcc gtagtgggcccttgacaggctggaaagtgttcttactgttattatgttctctacttggcatcattgtatgtgctgtggtg ggggctgtggttttccagaaacgccaggagcggaacaagcgattttactaaggtgcaggaggccgaaatttggggcagct ggggaagtttttttacaggtgggagggagaattgtatagactctggtttctaaaaggctctttcagagaaatgtatggaa tattttcatatcccctttttttcttggcaacaataggtaattgtgtcaaaacaatccggaatataggttgtactgtactt gggagcctgccattttgaaagttgtttagaaccttcaatccttctataaaaactttttatggaaaacaggcaaataacag tatggttcaaacttaaaaaaatgttgcttcttctctgggaggcatactttgcacttcagatagtatttccagatagttac tcttaagagtattttggtagtgcagctatgtggagggtggttttcttgctgtggcctataaacttaattcaagaaaacta ttttttgaactgaatgtatttcatagtttcacttattccagaaccttcttttttaataccagctatttttgttttgctgg gagtgaaactgacttgcaccaaaacaactggcatccatgaaatgtgatatctgtgactgcgttagcttgggagaacgggg ccttgattttcctagacaatatgaactatgtgtcccatttattaaacatctaaactagttgattccaa |
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| Transcript ID | habu1_s1827_g06772.t2 |
| Definition | - |
>habu1_s1827_g06772.t2 gaggcgggaccgctcctccttccttttcctatctcctaaccgccaagggagcaggtggcagggagatgcagcttcacagc cgtcgattttacttccgggctagggtcaaccggaaggaggaagaagtgcagaaggaataggagggtagagcgtccgggag ttggtgcctgcgggggttgacgaccagcatggtgctgtcacccctgctgtttcttctgctcctcttggccgggaccccgc cgcgaggagccgcagagctcacagatggcaacaacgagcatctaaaacgggaacactcgcttatcaagccttaccagggg gttggctccagttcaatgcctctctgggattttcaagggagtacaatgttgactagccagtatgttcgactgacccctga tgagcgcagcaaggaaggttctatctggaaccgggtgccctgttttctgaaggactgggagcttcatgttcattttaaag ttcacggggcagggaagaagaatctccatggagatggttttgccctgtggtacactcgggagcgccttactgcaggccct gtatttggcagtaaagacaaattccatggattggccattttcctggatacttatcccaatgaggaaactactgagcgtgt gtttccttatgtttctggtatggttaacaatggatccctgacctatgaccatagtaaagatggtcgctcgacggagttgg caggctgcacagctgacattcgtaatcagaaccacgacacctttttggctgtccgatattctcgggggcgtctgacggtg atgactgatgtggaggataaaaatgaatggaaaaactgctttgatgttgcaggagttcggttacccactggttatttctt tggggcttctgctggtacaggagatctatctgataatcatgatatcgtttcgatgaagctatttcagttgatggtggaac attccccagaagacgaaaacattgactggacaaagattgagcccagcgtcagtcttttcaaatcacccaaagataatgta gatgatccaacaggaaacttccgtagtgggcccttgacaggctggaaagtgttcttactgttattatgttctctacttgg catcattgtatgtgctgtggtgggggctgtggttttccagaaacgccaggagcggaacaagcgattttactaaggtgcag gaggccgaaatttggggcagctggggaagtttttttacaggtgggagggagaattgtatagactctggtttctaaaaggc tctttcagagaaatgtatggaatattttcatatcccctttttttcttggcaacaataggtaattgtgtcaaaacaatccg gaatataggttgtactgtacttgggagcctgccattttgaaagttgtttagaaccttcaatccttctataaaaacttttt atggaaaacaggcaaataacagtatggttcaaacttaaaaaaatgttgcttcttctctgggaggcatactttgcacttca gatagtatttccagatagttactcttaagagtattttggtagtgcagctatgtggagggtggttttcttgctgtggccta taaacttaattcaagaaaactattttttgaactgaatgtatttcatagtttcacttattccagaaccttcttttttaata ccagctatttttgttttgctgggagtgaaactgacttgcaccaaaacaactggcatccatgaaatgtgatatctgtgact gcgttagcttgggagaacggggccttgattttcctagacaatatgaactatgtgtcccatttattaaacatctaaactag ttgattccaa |
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Protein
| Protein ID | habu1_s1827_g06772.t1 |
|---|---|
| Definition | - |
>habu1_s1827_g06772.t1 MLTSQYVRLTPDERSKEGSIWNRVPCFLKDWELHVHFKVHGAGKKNLHGDGFALWYTRERLTAGPVFGSKDKFHGLAIFL DTYPNEETTERVFPYVSGMVNNGSLTYDHSKDGRSTELAGCTADIRNQNHDTFLAVRYSRGRLTVMTDVEDKNEWKNCFD VAGVRLPTGYFFGASAGTGDLSDNHDIVSMKLFQLMVEHSPEDENIDWTKIEPSVSLFKSPKDNVDDPTGNFRSGPLTGW KVFLLLLCSLLGIIVCAVVGAVVFQKRQERNKRFY |
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| Protein ID | habu1_s1827_g06772.t2 |
| Definition | - |
>habu1_s1827_g06772.t2 MVLSPLLFLLLLLAGTPPRGAAELTDGNNEHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERSKEGSIW NRVPCFLKDWELHVHFKVHGAGKKNLHGDGFALWYTRERLTAGPVFGSKDKFHGLAIFLDTYPNEETTERVFPYVSGMVN NGSLTYDHSKDGRSTELAGCTADIRNQNHDTFLAVRYSRGRLTVMTDVEDKNEWKNCFDVAGVRLPTGYFFGASAGTGDL SDNHDIVSMKLFQLMVEHSPEDENIDWTKIEPSVSLFKSPKDNVDDPTGNFRSGPLTGWKVFLLLLCSLLGIIVCAVVGA VVFQKRQERNKRFY |
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